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MacroAPE 1083:HEY2 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.0;0.0;7.030303030303032;0.969696969696968!2;0.0;1.939393939393936;4.0;2.060606060606064!3;0.0;2.060606060606064;3.030303030303032;2.909090...")
 
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111C8;0.402305!10789-110H6;0.932302!10828-111C9;0.971006!10788-110H5;0.903947!10792-110H9;0.45949!10765-110E9;0.679321!10829-111D1;0.73189!10830-111D2;0.533376!10831-111D3;0.66549!10832-111D4;0.894792!10833-111D5;0.824489!10764-110E8;0.902561!10770-110F5;0.900996!10399-106A3;0.752559!10400-106A4;0.595677!10405-106A9;0.685824!10834-111D6;0.618842!10835-111D7;0.533415!10836-111D8;0.703035!10837-111D9;0.643736!10699-109G6;0.848148!10802-111A1;0.865083!10796-110I4;0.639061!10010-101C1;0.0337245!10810-111A9;0.744544!10421-106C7;0.741944!10708-109H6;0.62982!12235-129G3;0.89294!12236-129G4;0.988496!12237-129G5;0.77111!10167-103B5;0.440278!10151-102I7;0.203014!10428-106D5;0.403371!10795-110I3;0.184577!10805-111A4;0.213728!10052-101G7;0.335826!10189-103D9;0.998593!10589-108D4;0.551945!10425-106D2;0.0283075!10427-106D4;0.346583!10702-109G9;0.851676!10432-106D9;0.44358!10496-107C1;0.250213!10718-109I7;0.0133736!10011-101C2;0.811!10053-101G8;0.698499!10686-109F2;0.141177!10084-102B3;0.983911!10012-101C3;0.273992!10085-102B4;0.312111!10482-107A5;0.272575!10419-106C5;0.0934442!10080-102A8;0.0162825!10760-110E4;0.91658!10709-109H7;0.362195!10710-109H8;0.0687964!10703-109H1;0.263641!10719-109I8;0.0604305!10642-109A3;0.0797433!10177-103C6;0.323841!10164-103B2;0.248425!10173-103C2;0.480921!10166-103B4;0.192539!10083-102B2;0.45154!10188-103D8;0.192654!10552-107I3;0.320912!10553-107I4;0.29618!10013-101C4;0.563839!10536-107G5;0.882043!10618-108G6;0.676268!10423-106C9;0.55042!10785-110H2;0.091232!12238-129G6;0.201529!12239-129G7;0.761316!12240-129G8;0.927485!10416-106C2;0.779336!10801-110I9;0.406316!10766-110F1;0.818291!10824-111C5;0.707096!10825-111C6;0.950278!10826-111C7;0.963136!10454-106G4;0.933591!10409-106B4;0.676652!10638-108I8;0.907559!10636-108I6;0.19497!10513-107D9;0.0629928!10420-106C6;0.0876022!10082-102B1;0.269115!10014-101C5;0.204857!10070-101I7;0.21694!10452-106G2;0.0866533!10453-106G3;0.528775!10449-106F8;0.295698!10042-101F6;0.28079!10069-101I6;0.377518!10193-103E4;0.543983!10631-108I1;0.344049!10438-106E6;0.447764!10488-107B2;0.285483!10196-103E7;0.870886!10071-101I8;0.509184!10071-101I8;0.137774!10041-101F5;0.310203!10451-106G1;0.565011!10450-106F9;0.929504!10604-108F1;0.497173!10605-108F2;0.08477!10606-108F3;0.160287!10603-108E9;0.106288!10497-107C2;0.0892466!10448-106F7;0.483672!10643-109A4;0.189827!10426-106D3;0.602531!10431-106D8;0.325943!10197-103E8;0.598801!10443-106F2;0.457245!10815-111B5;0.374091!10816-111B6;0.759129!10817-111B7;0.750286!10015-101C6;0.854044!10410-106B5;0.613305!10054-101G9;0.596036!10758-110E2;0.179152!10711-109H9;0.076555!10040-101F4;0.0707671!10470-106I2;0.32564!10415-106C1;0.024224!10198-103E9;0.17674!10614-108G2;0.6808!10612-108F9;0.951161!10549-107H9;0.129254!10615-108G3;0.978136!10487-107B1;0.0398301!10433-106E1;0.219395!10688-109F4;0.209052!10444-106F3;0.878556!10444-106F3;0.177786!10485-107A8;0.147739!10413-106B8;0.388303!10175-103C4;0.440741!10161-103A8;0.248654!12131-128D7;0.600984!10624-108H3;0.29738!10712-109I1;0.325921!10205-103F7;0.790331!10206-103F8;0.765776!10207-103F9;0.824065!10050-101G5;0.142174!10051-101G6;0.272484!10016-101C7;0.946945!10046-101G1;0.611692!10778-110G4;0.683963!10633-108I3;0.156627!10818-111B8;0.52887!10819-111B9;0.358017!10820-111C1;0.362684!10484-107A7;0.296037!10808-111A7;0.43567!10169-103B7;0.947189!10153-102I9;0.23331!13425-144D5;0.482052!13433-144E4;0.824205!13437-144E8;0.815485!11904-125F5;0.730385!11905-125F6;0.0150518!10039-101F3;0.0882451!10791-110H8;0.356214!10017-101C8;0.976439!10045-101F9;0.177872!10509-107D5;0.301893!10839-111E2;0.257938!10692-109F8;0.997107!10079-102A7;0.923048!10078-102A6;0.769047!10721-110A1;0.840474!10569-108B2;0.71936!10570-108B3;0.943333!10571-108B4;0.947199!10647-109A8;0.992223!10752-110D5;0.112945!10782-110G8;0.700121!10726-110A6;0.851284!10018-101C9;0.265162!10086-102B5;0.638143!10182-103D2;0.166386!10165-103B3;0.415112!10499-107C4;0.325696!10408-106B3;0.0357714!10019-101D1;0.862453!10068-101I5;0.795021!10075-102A3;0.908439!10077-102A5;0.949181!10727-110A7;0.0763625!10775-110G1;0.831862!10412-106B7;0.460537!12231-129F8;0.848767!12232-129F9;0.292871!12233-129G1;0.436146!12234-129G2;0.495095!10414-106B9;0.356816!10170-103B8;0.355689!10183-103D3;0.243555!10150-102I6;0.266224!10174-103C3;0.472192!10155-103A2;0.187603!10038-101F2;0.25366!10838-111E1;0.256819!10759-110E3;0.561995!10514-107E1;0.357749!10465-106H6;0.964298!10691-109F7;0.704913!10843-111E6;0.0883626!10844-111E7;0.238195!11747-123G1;0.12157!11748-123G2;0.862614!11749-123G3;0.928274!11750-123G4;0.77241!11751-123G5;0.332395!11840-124H4;0.408395!11752-123G6;0.273594!11753-123G7;0.975823!11754-123G8;0.715983!11755-123G9;0.961418!11756-123H1;0.714403!11833-124G6;0.40955!11760-123H5;0.987619!11836-124G9;0.586389!11758-123H3;0.846492!11835-124G8;0.713144!11762-123H7;0.681221!11838-124H2;0.967676!11757-123H2;0.979651!11759-123H4;0.993767!11761-123H6;0.315801!11842-124H6;0.628925!11837-124H1;0.962285!10568-108B1;0.716984!13230-141I8;0.48563!13231-141I9;0.517081!10696-109G3;0.773463!10493-107B7;0.102443!10494-107B8;0.197646!10850-111F4;0.126301!10851-111F5;0.150682!10852-111F6;0.19481!10853-111F7;0.132434!10854-111F8;0.050102!10855-111F9;0.162934!10856-111G1;0.249052!10847-111F1;0.720351!10846-111E9;0.0833891!10848-111F2;0.151409!10845-111E8;0.20256!10857-111G2;0.50291!10858-111G3;0.285472!10156-103A3;0.00881702!11901-125F2;0.431764!11902-125F3;0.0379985!11903-125F4;0.00212423!10689-109F5;0.00215143!10648-109A9;0.25393!10784-110H1;0.531249!10744-110C6;0.81609!10772-110F7;0.599973!10474-106I6;0.446745!10600-108E6;0.90439!10684-109E9;0.000643825!12226-129F3;0.340527!12227-129F4;0.13194!10508-107D4;0.30619!10539-107G8;0.661369!10607-108F4;0.996993!10555-107I6;0.471448!10774-110F9;0.512484!10637-108I7;0.57981!10663-109C6;0.296066!10728-110A8;0.903946!10729-110A9;0.624175!10430-106D7;0.434233!10730-110B1;0.343537!10813-111B3;0.118953!10812-111B2;0.662481!10037-101F1;0.50839!10172-103C1;0.331634!10163-103B1;0.235382!10076-102A4;0.591505!10073-102A1;0.266466!10036-101E9;0.417052!10195-103E6;0.38599!10277-104E7;0.319125!10434-106E2;0.445726!10550-107I1;0.833399!10545-107H5;0.170256!10544-107H4;0.457846!10704-109H2;0.533876!10510-107D6;0.0946455!10558-107I9;0.520984!10020-101D2;0.371867!10732-110B3;0.621077!10049-101G4;0.749655!10698-109G5;0.035265!10437-106E5;0.373385!10417-106C3;0.0448934!10035-101E8;0.696531!10171-103B9;0.340116!10157-103A4;0.265735!10034-101E7;0.466837!10072-101I9;0.405882!10199-103F1;0.323216!10200-103F2;0.0324098!10697-109G4;0.575769!10723-110A3;0.14882!10179-103C8;0.647173!10160-103A7;0.672058!10180-103C9;0.738365!10162-103A9;0.036851!10021-101D3;0.376649!10840-111E3;0.403482!10706-109H4;0.711421!10033-101E6;0.907698!10032-101E5;0.307521!10490-107B4;0.371576!10439-106E7;0.512167!10022-101D4;0.0804215!10176-103C5;0.608866!10469-106I1;0.463793!10067-101I4;0.919386!10411-106B6;0.203822!10471-106I3;0.0356406!10030-101E3;0.336542!10475-106I7;0.309213!10787-110H4;0.32239!10477-106I9;0.833358!10695-109G2;0.653161!11771-123I7;0.231912!11772-123I8;0.461112!11773-123I9;0.558121!10093-102C3;0.349365!10442-106F1;0.0175387!10442-106F1;0.890628!10201-103F3;0.975363!10639-108I9;0.470114!11843-124H7;0.612345!11841-124H5;0.749034!10693-109F9;0.589493!10436-106E4;0.147781!10483-107A6;0.00781014!10282-104F3;0.0251978!10023-101D5;0.060828!10066-101I3;0.557189!10065-101I2;0.578116!10800-110I8;0.1933!10610-108F7;0.0381688!10841-111E4;0.646413!10541-107H1;0.71552!10842-111E5;0.235893!10562-108A4;0.397062!10024-101D6;0.00474144!10064-101I1;0.1631!10609-108F6;0.064932!10048-101G3;0.0161782!10781-110G7;0.979985!10181-103D1;0.147133!10159-103A6;0.252556!10056-101H2;0.422891!10737-110B8;0.168009!10025-101D7;0.337034!10044-101F8;0.0272449!10424-106D1;0.202177!10463-106H4;0.991015!10616-108G4;0.463328!10486-107A9;0.0885542!10062-101H8;0.153885!10202-103F4;0.51823!10158-103A5;0.0915879!10441-106E9;0.468389!10031-101E4;0.654515!10063-101H9;0.309793!10063-101H9;0.338908!11763-123H8;0.112522!11765-123I1;0.878433!11768-123I4;0.911024!10807-111A6;0.893435!10790-110H7;0.282962!10798-110I6;0.743004!10786-110H3;0.290916!10591-108D6;0.633113!10593-108D8;0.884619!10590-108D5;0.938922!10026-101D8;0.955023!10096-102C6;0.001138!10168-103B6;0.0018026!10154-103A1;0.219108!10209-103G2;0.4993!10061-101H7;0.402224!10027-101D9;0.054727!10043-101F7;0.833013!10783-110G9;0.520198!10028-101E1;0.676681!10060-101H6;0.201979!10203-103F5;0.250169!10059-101H5;0.299107!10047-101G2;0.151578!10029-101E2;0.313273!10058-101H4;0.569658!10418-106C4;0.205432!10492-107B6;0.375134!10694-109G1;0.932963!10797-110I5;0.362755!10057-101H3;0.798011!10100-102D1;0.192736!10055-101H1;0.840734!10204-103F6;0.472391!10191-103E2;0.330105!10563-108A5;0.975017
|name=HEY2_f1
|name=HEY2_f1
|tomtom_result=h#MA0449.1;-3;6.82209e-07;0.000324731;0.000315082;10;GGGGGCACGTGGCATTA;GGCACGTGCC;+!Myc#MA0147.1;-3;2.11604e-06;0.00100724;0.000651538;10;GGGGGCACGTGGCATTA;CGCACGTGGC;+!Mycn#MA0104.2;-3;4.12788e-06;0.00196487;0.000953243;10;GGGGGCACGTGGCATTA;CGCACGTGGC;+!RTG3#MA0376.1;2;2.85674e-05;0.0135981;0.00508571;17;GGGGGCACGTGGCATTA;GACTAAGCACGTGCTAATAT;-!PHO4#MA0357.1;-4;3.85401e-05;0.0183451;0.00508571;8;GGGGGCACGTGGCATTA;GCACGTGC;+!USF1#MA0093.1;-5;8.98326e-05;0.0427603;0.00921993;7;GGGGGCACGTGGCATTA;CACGTGG;+!Mycn#MA0104.2;-5;0.000161883;0.0770564;0.0149533;6;GGGGGCACGTGGCATTA;CACGTG;+!Arnt#MA0004.1;-5;0.000229336;0.109164;0.0158598;6;GGGGGCACGTGGCATTA;CACGTG;-!CBF1#MA0281.1;-4;0.000257545;0.122591;0.0158598;8;GGGGGCACGTGGCATTA;GCACGTGA;+!HIF1A::ARNT#MA0259.1;-4;0.000400184;0.190487;0.0231034;8;GGGGGCACGTGGCATTA;GGACGTGC;+!HAC1#MA0310.1;-5;0.000573984;0.273216;0.0294553;8;GGGGGCACGTGGCATTA;CACGTGTC;-!MAX#MA0058.1;-4;0.000612871;0.291727;0.0297956;10;GGGGGCACGTGGCATTA;TCACGTGGTC;-!MYC::MAX#MA0059.1;-2;0.000678359;0.322899;0.0313304;11;GGGGGCACGTGGCATTA;GAGCACGTGGT;+!EmBP-1#MA0128.1;-4;0.00100716;0.479407;0.0422874;8;GGGGGCACGTGGCATTA;ACACGTGG;+!TYE7#MA0409.1;-5;0.00198088;0.942899;0.0762401;7;GGGGGCACGTGGCATTA;CACGTGA;+!DOT6#MA0351.1;3;0.00344048;1.63767;0.1135;17;GGGGGCACGTGGCATTA;TTCTGCACCTCATCGCATCCT;+!TFAP2A#MA0003.1;-4;0.0078162;3.72051;0.232901;9;GGGGGCACGTGGCATTA;CCCCCGGGC;-!Pax4#MA0068.1;1;0.00872946;4.15523;0.251985;17;GGGGGCACGTGGCATTA;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!STP2#MA0395.1;1;0.00982028;4.67445;0.274882;17;GGGGGCACGTGGCATTA;TCGTCGTGCGGCGCCGATCA;-!ceh-22#MA0264.1;-2;0.0103021;4.90378;0.279886;11;GGGGGCACGTGGCATTA;TTTCAAGTGGT;-!Ar#MA0007.1;1;0.0121782;5.79684;0.320266;17;GGGGGCACGTGGCATTA;GGCGGGTACACGATGTTCTTAT;-!MET32#MA0334.1;-7;0.0124818;5.94134;0.320266;7;GGGGGCACGTGGCATTA;TGTGGCG;-!RSC30#MA0375.1;-3;0.0130263;6.20052;0.325204;8;GGGGGCACGTGGCATTA;CGCGCGCG;-!TOD6#MA0350.1;3;0.014772;7.03146;0.35908;17;GGGGGCACGTGGCATTA;AGGCACAGCTCATCGCGTTTT;+!sna#MA0086.1;-5;0.0172213;8.19732;0.393869;6;GGGGGCACGTGGCATTA;CAGGTG;+!INO2#MA0321.1;-4;0.0174765;8.31883;0.393869;9;GGGGGCACGTGGCATTA;GCATGTGAA;+!RIM101#MA0368.1;-7;0.0174823;8.32159;0.393869;7;GGGGGCACGTGGCATTA;CTTGGCG;-!CRZ1#MA0285.1;-8;0.0192369;9.15676;0.406695;9;GGGGGCACGTGGCATTA;GTGGCTTAG;-!Arnt::Ahr#MA0006.1;-5;0.0193725;9.2213;0.406695;6;GGGGGCACGTGGCATTA;TGCGTG;+!Zfx#MA0146.1;-2;0.020797;9.89937;0.426898;14;GGGGGCACGTGGCATTA;GGGGCCGAGGCCTG;+
}}
}}

Latest revision as of 14:01, 7 September 2012

Full Name: HEY2_f1

Motif matrix
POACGT
10.00.07.0303030303030320.969696969696968
20.01.9393939393939364.02.060606060606064
30.02.0606060606060643.0303030303030322.909090909090912
40.02.0606060606060644.9696969696969680.969696969696968
51.0909090909090880.06.9090909090909120.0
60.06.9090909090909120.01.090909090909088
74.00.00.9696969696969683.030303030303032
80.07.0303030303030320.9696969696969680.0
90.00.9696969696969687.0303030303030320.0
100.00.9696969696969680.07.030303030303032
110.00.08.00.0
120.9696969696969681.9393939393939365.0909090909090880.0
130.9696969696969685.9393939393939361.0909090909090880.0
142.9090909090909122.0606060606060640.9696969696969682.060606060606064
150.02.0606060606060640.9696969696969684.969696969696968
160.02.0606060606060642.9090909090909123.030303030303032
172.9393939393939362.0909090909090881.9696969696969681.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
h#MA0449.1-36.82209e-070.0003247310.00031508210GGGGGCACGTGGCATTAGGCACGTGCC+
Myc#MA0147.1-32.11604e-060.001007240.00065153810GGGGGCACGTGGCATTACGCACGTGGC+
Mycn#MA0104.2-34.12788e-060.001964870.00095324310GGGGGCACGTGGCATTACGCACGTGGC+
RTG3#MA0376.122.85674e-050.01359810.0050857117GGGGGCACGTGGCATTAGACTAAGCACGTGCTAATAT-
PHO4#MA0357.1-43.85401e-050.01834510.005085718GGGGGCACGTGGCATTAGCACGTGC+
USF1#MA0093.1-58.98326e-050.04276030.009219937GGGGGCACGTGGCATTACACGTGG+
Mycn#MA0104.2-50.0001618830.07705640.01495336GGGGGCACGTGGCATTACACGTG+
Arnt#MA0004.1-50.0002293360.1091640.01585986GGGGGCACGTGGCATTACACGTG-
CBF1#MA0281.1-40.0002575450.1225910.01585988GGGGGCACGTGGCATTAGCACGTGA+
HIF1A::ARNT#MA0259.1-40.0004001840.1904870.02310348GGGGGCACGTGGCATTAGGACGTGC+
HAC1#MA0310.1-50.0005739840.2732160.02945538GGGGGCACGTGGCATTACACGTGTC-
MAX#MA0058.1-40.0006128710.2917270.029795610GGGGGCACGTGGCATTATCACGTGGTC-
MYC::MAX#MA0059.1-20.0006783590.3228990.031330411GGGGGCACGTGGCATTAGAGCACGTGGT+
EmBP-1#MA0128.1-40.001007160.4794070.04228748GGGGGCACGTGGCATTAACACGTGG+
TYE7#MA0409.1-50.001980880.9428990.07624017GGGGGCACGTGGCATTACACGTGA+
DOT6#MA0351.130.003440481.637670.113517GGGGGCACGTGGCATTATTCTGCACCTCATCGCATCCT+
TFAP2A#MA0003.1-40.00781623.720510.2329019GGGGGCACGTGGCATTACCCCCGGGC-
Pax4#MA0068.110.008729464.155230.25198517GGGGGCACGTGGCATTAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
STP2#MA0395.110.009820284.674450.27488217GGGGGCACGTGGCATTATCGTCGTGCGGCGCCGATCA-
ceh-22#MA0264.1-20.01030214.903780.27988611GGGGGCACGTGGCATTATTTCAAGTGGT-
Ar#MA0007.110.01217825.796840.32026617GGGGGCACGTGGCATTAGGCGGGTACACGATGTTCTTAT-
MET32#MA0334.1-70.01248185.941340.3202667GGGGGCACGTGGCATTATGTGGCG-
RSC30#MA0375.1-30.01302636.200520.3252048GGGGGCACGTGGCATTACGCGCGCG-
TOD6#MA0350.130.0147727.031460.3590817GGGGGCACGTGGCATTAAGGCACAGCTCATCGCGTTTT+
sna#MA0086.1-50.01722138.197320.3938696GGGGGCACGTGGCATTACAGGTG+
INO2#MA0321.1-40.01747658.318830.3938699GGGGGCACGTGGCATTAGCATGTGAA+
RIM101#MA0368.1-70.01748238.321590.3938697GGGGGCACGTGGCATTACTTGGCG-
CRZ1#MA0285.1-80.01923699.156760.4066959GGGGGCACGTGGCATTAGTGGCTTAG-
Arnt::Ahr#MA0006.1-50.01937259.22130.4066956GGGGGCACGTGGCATTATGCGTG+
Zfx#MA0146.1-20.0207979.899370.42689814GGGGGCACGTGGCATTAGGGGCCGAGGCCTG+
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