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MacroAPE 1083:CNhs13068 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;198.2636267444292;146.88651751076358;367.60007622702295;85.60291297543543!2;154.5404490619001;131.62435464351393;397.8242293595994;114.36410...")
 
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20H7;0.550525!11681-122H7;0.819706!11216-116B1;0.441379!12179-129A1;0.803045!12180-129A2;0.11115!12181-129A3;0.12509!12176-128I7;0.166036!12177-128I8;0.0350498!12182-129A4;0.0261534!12183-129A5;0.122195!12184-129A6;0.0992604!10809-111A8;0.118001!10597-108E3;0.000206043!10717-109I6;0.907931!10455-106G5;0.0326993!10534-107G3;1.14494e-05!10429-106D6;3.56391e-05!10464-106H5;0.0090422!10827-111C8;9.26409e-06!10789-110H6;4.30677e-05!10828-111C9;2.46371e-07!10788-110H5;6.59808e-06!10792-110H9;3.43844e-06!10765-110E9;2.76758e-07!10829-111D1;5.05805e-05!10830-111D2;3.44395e-05!10831-111D3;0.000641248!10832-111D4;1.3537e-05!10833-111D5;6.3595e-06!10764-110E8;1.90283e-05!10770-110F5;0.000776194!10399-106A3;2.6694e-07!10400-106A4;1.29563e-06!10405-106A9;1.8304e-06!10834-111D6;1.32404e-06!10835-111D7;9.22531e-06!10836-111D8;3.37234e-06!10837-111D9;0.0225687!10699-109G6;3.10394e-06!10802-111A1;8.4123e-05!10796-110I4;0.00133975!10010-101C1;0.00300024!10810-111A9;0.00173217!10421-106C7;0.00146214!10708-109H6;0.000450988!12235-129G3;0.25199!12236-129G4;0.0417006!12237-129G5;0.0891531!10167-103B5;0.0570964!10151-102I7;1.58589e-05!10428-106D5;2.54656e-06!10795-110I3;0.135501!10805-111A4;8.54118e-05!10052-101G7;0.0192522!10189-103D9;0.000690485!10589-108D4;0.0585715!10425-106D2;0.0231027!10427-106D4;0.254749!10702-109G9;0.00411394!10432-106D9;0.00223867!10496-107C1;0.072007!10718-109I7;0.160877!10011-101C2;1.62646e-07!10053-101G8;5.36324e-05!10686-109F2;0.0968313!10084-102B3;2.48423e-06!10012-101C3;0.000332165!10085-102B4;8.75159e-05!10482-107A5;1.17538e-05!10419-106C5;0.0881039!10080-102A8;0.0223635!10760-110E4;0.0188!10709-109H7;0.00407342!10710-109H8;0.104537!10703-109H1;0.0489921!10719-109I8;0.260796!10642-109A3;0.140335!10177-103C6;0.494512!10164-103B2;2.96094e-05!10173-103C2;6.76413e-05!10166-103B4;0.000368603!10083-102B2;0.000186544!10188-103D8;0.000282766!10552-107I3;1.0556e-06!10553-107I4;0.00041775!10013-101C4;0.69252!10536-107G5;0.00114708!10618-108G6;0.0917278!10423-106C9;0.0178648!10785-110H2;6.31729e-05!12238-129G6;0.00724327!12239-129G7;0.0496492!12240-129G8;0.0457008!10416-106C2;0.447147!10801-110I9;3.93904e-06!10766-110F1;5.0848e-08!10824-111C5;3.53282e-06!10825-111C6;5.86112e-05!10826-111C7;7.3634e-05!10454-106G4;0.000119297!10409-106B4;8.13569e-05!10638-108I8;1.42905e-06!10636-108I6;0.0118272!10513-107D9;0.0161296!10420-106C6;0.00583696!10082-102B1;0.00740947!10014-101C5;0.0197493!10070-101I7;0.00135585!10452-106G2;0.000134973!10453-106G3;0.00165215!10449-106F8;5.6379e-05!10042-101F6;1.67575e-05!10069-101I6;0.000119223!10193-103E4;0.00190768!10631-108I1;0.000456179!10438-106E6;6.64541e-06!10488-107B2;0.101985!10196-103E7;0.00295951!10071-101I8;0.00339149!10071-101I8;0.00112826!10041-101F5;2.99801e-05!10451-106G1;0.0001291!10450-106F9;0.000844!10604-108F1;0.0158557!10605-108F2;0.365349!10606-108F3;0.0241269!10603-108E9;0.54701!10497-107C2;0.349493!10448-106F7;0.0589093!10643-109A4;0.014971!10426-106D3;0.00547088!10431-106D8;0.315787!10197-103E8;0.0106255!10443-106F2;0.00373202!10815-111B5;0.401931!10816-111B6;0.00170469!10817-111B7;0.0101268!10015-101C6;0.00193931!10410-106B5;0.00127835!10054-101G9;0.710966!10758-110E2;0.000574829!10711-109H9;0.568595!10040-101F4;0.0125354!10470-106I2;6.38956e-05!10415-106C1;0.040353!10198-103E9;0.839734!10614-108G2;0.00247458!10612-108F9;0.399788!10549-107H9;0.034656!10615-108G3;0.00185304!10487-107B1;0.535302!10433-106E1;5.21547e-05!10688-109F4;0.874272!10444-106F3;0.481008!10444-106F3;0.141005!10485-107A8;0.0873348!10413-106B8;0.467178!10175-103C4;0.546122!10161-103A8;0.000534239!12131-128D7;0.000226713!10624-108H3;0.184645!10712-109I1;0.000139011!10205-103F7;0.000620453!10206-103F8;0.000260715!10207-103F9;0.000538019!10050-101G5;0.0016037!10051-101G6;0.170355!10016-101C7;0.0667152!10046-101G1;0.00859197!10778-110G4;0.000362305!10633-108I3;0.00038582!10818-111B8;0.422311!10819-111B9;3.53463e-05!10820-111C1;2.52367e-05!10484-107A7;7.87667e-05!10808-111A7;0.144948!10169-103B7;4.8709e-05!10153-102I9;3.94383e-05!13425-144D5;1.86896e-06!13433-144E4;0.134662!13437-144E8;0.173212!11904-125F5;0.0669765!11905-125F6;0.118559!10039-101F3;0.582991!10791-110H8;2.11059e-05!10017-101C8;0.0457219!10045-101F9;0.131026!10509-107D5;0.000226293!10839-111E2;0.424818!10692-109F8;0.162946!10079-102A7;0.57363!10078-102A6;0.00332414!10721-110A1;0.0606754!10569-108B2;0.0116313!10570-108B3;0.128525!10571-108B4;0.321712!10647-109A8;0.109602!10752-110D5;0.897712!10782-110G8;2.89104e-05!10726-110A6;0.0688615!10018-101C9;0.302128!10086-102B5;0.68874!10182-103D2;0.682831!10165-103B3;3.08136e-05!10499-107C4;0.0003488!10408-106B3;0.112318!10019-101D1;0.373961!10068-101I5;0.00299552!10075-102A3;0.00021419!10077-102A5;0.0212004!10727-110A7;0.460587!10775-110G1;1.48714e-06!10412-106B7;1.27344e-05!12231-129F8;0.789023!12232-129F9;0.0262498!12233-129G1;0.0184664!12234-129G2;0.0666746!10414-106B9;0.0417462!10170-103B8;0.0586629!10183-103D3;0.000933239!10150-102I6;0.000194968!10174-103C3;2.2324e-05!10155-103A2;0.00178665!10038-101F2;4.54185e-06!10838-111E1;1.09075e-05!10759-110E3;0.733727!10514-107E1;0.452228!10465-106H6;0.0628299!10691-109F7;0.125633!10843-111E6;0.621576!10844-111E7;0.792437!11747-123G1;0.845432!11748-123G2;0.711246!11749-123G3;0.0715868!11750-123G4;0.264385!11751-123G5;0.043973!11840-124H4;0.0151038!11752-123G6;0.0916563!11753-123G7;0.0629126!11754-123G8;0.00207421!11755-123G9;0.182819!11756-123H1;0.199641!11833-124G6;0.0295834!11760-123H5;0.108408!11836-124G9;0.0216163!11758-123H3;0.00908116!11835-124G8;0.0121634!11762-123H7;0.00308174!11838-124H2;0.0220548!11757-123H2;0.00265304!11759-123H4;0.637986!11761-123H6;0.00729934!11842-124H6;0.000299713!11837-124H1;0.000699957!10568-108B1;0.000158364!13230-141I8;0.536955!13231-141I9;0.053549!10696-109G3;0.0313965!10493-107B7;0.000162822!10494-107B8;0.616845!10850-111F4;0.17679!10851-111F5;0.216851!10852-111F6;0.640174!10853-111F7;0.848056!10854-111F8;0.0764961!10855-111F9;0.577616!10856-111G1;0.658115!10847-111F1;0.531478!10846-111E9;0.879028!10848-111F2;0.462799!10845-111E8;0.309828!10857-111G2;0.097257!10858-111G3;0.0447699!10156-103A3;0.00383697!11901-125F2;2.73995e-05!11902-125F3;0.155334!11903-125F4;0.0578781!10689-109F5;0.0407105!10648-109A9;0.0575735!10784-110H1;0.372574!10744-110C6;0.284535!10772-110F7;7.74996e-05!10474-106I6;2.02774e-06!10600-108E6;2.77558e-05!10684-109E9;0.212069!12226-129F3;0.50881!12227-129F4;0.178212!10508-107D4;0.00693985!10539-107G8;0.775238!10607-108F4;0.803108!10555-107I6;0.03871!10774-110F9;0.723425!10637-108I7;0.000129164!10663-109C6;0.375275!10728-110A8;0.388476!10729-110A9;0.880126!10430-106D7;9.31591e-05!10730-110B1;0.00204827!10813-111B3;0.145736!10812-111B2;0.00048361!10037-101F1;0.0158833!10172-103C1;3.68516e-05!10163-103B1;0.000266253!10076-102A4;1.89083e-05!10073-102A1;8.12787e-05!10036-101E9;0.000146985!10195-103E6;2.93176e-05!10277-104E7;3.32705e-05!10434-106E2;0.0112206!10550-107I1;0.120815!10545-107H5;0.00469159!10544-107H4;0.266459!10704-109H2;0.27246!10510-107D6;0.00945712!10558-107I9;0.428288!10020-101D2;0.687222!10732-110B3;0.00259586!10049-101G4;0.438455!10698-109G5;0.720782!10437-106E5;0.000628866!10417-106C3;0.223603!10035-101E8;0.129684!10171-103B9;7.60169e-05!10157-103A4;0.000842281!10034-101E7;3.2819e-05!10072-101I9;4.76e-05!10199-103F1;0.000167727!10200-103F2;0.348603!10697-109G4;0.00244032!10723-110A3;0.176409!10179-103C8;0.613367!10160-103A7;0.00839708!10180-103C9;0.0161809!10162-103A9;0.0034488!10021-101D3;0.00125232!10840-111E3;0.0319796!10706-109H4;1.85907e-05!10033-101E6;0.110564!10032-101E5;6.75528e-05!10490-107B4;4.36148e-05!10439-106E7;0.0017937!10022-101D4;0.124731!10176-103C5;0.000160392!10469-106I1;0.000393066!10067-101I4;0.0689091!10411-106B6;1.5263e-06!10471-106I3;0.793941!10030-101E3;0.0372972!10475-106I7;5.65524e-05!10787-110H4;0.145979!10477-106I9;0.00914838!10695-109G2;0.50855!11771-123I7;2.09937e-06!11772-123I8;0.40355!11773-123I9;0.179257!10093-102C3;0.0078612!10442-106F1;0.465385!10442-106F1;0.0915782!10201-103F3;0.13317!10639-108I9;0.0140767!11843-124H7;0.858598!11841-124H5;0.860789!10693-109F9;0.282094!10436-106E4;0.147527!10483-107A6;0.0191391!10282-104F3;0.00713557!10023-101D5;0.153999!10066-101I3;0.00868475!10065-101I2;0.012465!10800-110I8;0.000252415!10610-108F7;0.574507!10841-111E4;0.54631!10541-107H1;0.0766153!10842-111E5;0.20011!10562-108A4;0.319209!10024-101D6;0.344118!10064-101I1;0.010564!10609-108F6;0.00329926!10048-101G3;0.103812!10781-110G7;1.56101e-05!10181-103D1;0.580919!10159-103A6;0.000188951!10056-101H2;6.00141e-05!10737-110B8;3.47159e-05!10025-101D7;0.00126268!10044-101F8;0.584175!10424-106D1;0.0179722!10463-106H4;0.00072825!10616-108G4;0.200198!10486-107A9;0.413057!10062-101H8;7.92e-05!10202-103F4;2.62885e-05!10158-103A5;0.396111!10441-106E9;0.0040174!10031-101E4;0.72992!10063-101H9;1.38844e-05!10063-101H9;8.31585e-06!11763-123H8;0.0023025!11765-123I1;0.0159036!11768-123I4;0.0332771!10807-111A6;0.0955065!10790-110H7;0.733595!10798-110I6;0.129647!10786-110H3;0.644322!10591-108D6;0.295648!10593-108D8;0.237101!10590-108D5;0.73289!10026-101D8;0.00137907!10096-102C6;0.107477!10168-103B6;0.53313!10154-103A1;0.00148681!10209-103G2;4.41711e-05!10061-101H7;0.041568!10027-101D9;0.00164921!10043-101F7;0.0625606!10783-110G9;0.866977!10028-101E1;0.636138!10060-101H6;0.0492961!10203-103F5;0.0071972!10059-101H5;0.0568321!10047-101G2;0.0219334!10029-101E2;0.710745!10058-101H4;0.040974!10418-106C4;0.00120711!10492-107B6;0.218987!10694-109G1;0.0253284!10797-110I5;0.000344225!10057-101H3;0.829956!10100-102D1;0.00904662!10055-101H1;0.000536073!10204-103F6;8.90091e-05!10191-103E2;0.00128187!10563-108A5;0.0300095
|name=CNhs13068_bl_f2
|name=CNhs13068_bl_f2
|tomtom_result=Trl#MA0205.1;0;0.00224304;1.06769;1;10;GGAGGAGTGA;GAGAGAGCAA;-!GCN4#MA0303.1;4;0.00292883;1.39412;1;10;GGAGGAGTGA;CAAGGGATGAGTCATACTTCA;+!SP1#MA0079.2;0;0.00533712;2.54047;1;10;GGAGGAGTGA;GGGGGCGGGG;-!Pax4#MA0068.1;3;0.0065915;3.13755;1;10;GGAGGAGTGA;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!z#MA0255.1;-2;0.00700365;3.33374;1;8;GGAGGAGTGA;TTGAGTGATT;+!ARG81#MA0272.1;-3;0.00895897;4.26447;1;7;GGAGGAGTGA;AGAGTCAC;-!hkb#MA0450.1;-1;0.0113237;5.39008;1;9;GGAGGAGTGA;GGGGCGTGA;+!CHA4#MA0283.1;0;0.0116563;5.5484;1;8;GGAGGAGTGA;GGCGGAGA;+!Macho-1#MA0118.1;-1;0.0120672;5.74399;1;9;GGAGGAGTGA;TGGGGGGTC;+!MZF1_5-13#MA0057.1;0;0.0125087;5.95416;1;10;GGAGGAGTGA;GGAGGGGGAA;+!Pax5#MA0014.1;0;0.0143328;6.8224;1;10;GGAGGAGTGA;GGAGCACTGAAGCGTAACCG;+!MZF1_1-4#MA0056.1;0;0.0172631;8.21724;1;6;GGAGGAGTGA;TGGGGA;+!USV1#MA0413.1;10;0.0183748;8.74642;1;10;GGAGGAGTGA;CACAAATTCAGGGGGAATTT;-!AFT2#MA0270.1;-1;0.019196;9.13729;1;8;GGAGGAGTGA;GGGGTGTG;-
}}
}}

Latest revision as of 14:04, 7 September 2012

Full Name: CNhs13068_bl_f2

Motif matrix
POACGT
1198.2636267444292146.88651751076358367.6000762270229585.60291297543543
2154.5404490619001131.62435464351393397.8242293595994114.36410039263785
3380.6038825685415625.27463610007608364.7597183898294627.714896399204203
414.4669255949778553.6176712290808304491.4870130636904288.7815235699023
50.00.0798.35313345765110.0
6798.35313345765110.00.00.0
71.03300580147794421.0330058014779442795.25411605321721.0330058014779442
896.68136249081952238.8123136806787209.40847153275695253.45098575339594
942.07129163986214288.48263532912176374.381361158891593.41784532977593
10414.17495518130454259.049537222380585.044034558869540.08460649509662

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.100.002243041.06769110GGAGGAGTGAGAGAGAGCAA-
GCN4#MA0303.140.002928831.39412110GGAGGAGTGACAAGGGATGAGTCATACTTCA+
SP1#MA0079.200.005337122.54047110GGAGGAGTGAGGGGGCGGGG-
Pax4#MA0068.130.00659153.13755110GGAGGAGTGAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
z#MA0255.1-20.007003653.3337418GGAGGAGTGATTGAGTGATT+
ARG81#MA0272.1-30.008958974.2644717GGAGGAGTGAAGAGTCAC-
hkb#MA0450.1-10.01132375.3900819GGAGGAGTGAGGGGCGTGA+
CHA4#MA0283.100.01165635.548418GGAGGAGTGAGGCGGAGA+
Macho-1#MA0118.1-10.01206725.7439919GGAGGAGTGATGGGGGGTC+
MZF1_5-13#MA0057.100.01250875.95416110GGAGGAGTGAGGAGGGGGAA+
Pax5#MA0014.100.01433286.8224110GGAGGAGTGAGGAGCACTGAAGCGTAACCG+
MZF1_1-4#MA0056.100.01726318.2172416GGAGGAGTGATGGGGA+
USV1#MA0413.1100.01837488.74642110GGAGGAGTGACACAAATTCAGGGGGAATTT-
AFT2#MA0270.1-10.0191969.1372918GGAGGAGTGAGGGGTGTG-
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