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MacroAPE 1083:TATCCCATT,motif724: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;45.88;105.4;52.08;416.64!2;421.6;84.32;58.28;55.8!3;24.8;50.84;32.86;511.5!4;18.6;486.08;45.88;69.44!5;44.02;505.92;37.2;32.86!6;35.96;501.5...")
 
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89-110H6;0.236004!10828-111C9;0.396307!10788-110H5;0.539785!10792-110H9;0.720207!10765-110E9;0.419333!10829-111D1;0.636831!10830-111D2;0.318191!10831-111D3;0.434994!10832-111D4;0.576698!10833-111D5;0.330527!10764-110E8;0.345936!10770-110F5;0.474752!10399-106A3;0.463616!10400-106A4;0.615205!10405-106A9;0.507609!10834-111D6;0.572531!10835-111D7;0.321966!10836-111D8;0.785359!10837-111D9;0.105296!10699-109G6;0.41006!10802-111A1;0.248253!10796-110I4;0.449792!10010-101C1;0.88808!10810-111A9;0.553247!10421-106C7;0.583641!10708-109H6;0.342542!12235-129G3;0.32796!12236-129G4;0.588172!12237-129G5;0.511764!10167-103B5;0.78788!10151-102I7;0.283266!10428-106D5;0.207997!10795-110I3;0.762456!10805-111A4;0.227298!10052-101G7;0.468022!10189-103D9;0.500903!10589-108D4;0.689888!10425-106D2;0.987691!10427-106D4;0.927062!10702-109G9;0.784049!10432-106D9;0.600242!10496-107C1;0.626781!10718-109I7;0.842078!10011-101C2;0.478639!10053-101G8;0.831462!10686-109F2;0.191022!10084-102B3;0.307782!10012-101C3;0.31127!10085-102B4;0.456558!10482-107A5;0.161642!10419-106C5;0.44595!10080-102A8;0.422237!10760-110E4;0.867103!10709-109H7;0.973314!10710-109H8;0.282113!10703-109H1;0.946668!10719-109I8;0.608664!10642-109A3;0.952909!10177-103C6;0.482378!10164-103B2;0.417223!10173-103C2;0.319839!10166-103B4;0.208737!10083-102B2;0.146681!10188-103D8;0.169335!10552-107I3;0.297751!10553-107I4;0.630791!10013-101C4;0.516419!10536-107G5;0.603427!10618-108G6;0.524982!10423-106C9;0.199089!10785-110H2;0.446059!12238-129G6;0.369404!12239-129G7;0.361552!12240-129G8;0.817891!10416-106C2;0.133043!10801-110I9;0.216033!10766-110F1;0.260417!10824-111C5;0.316477!10825-111C6;0.0995291!10826-111C7;0.13201!10454-106G4;0.173778!10409-106B4;0.159972!10638-108I8;0.368957!10636-108I6;0.814187!10513-107D9;0.501616!10420-106C6;0.748011!10082-102B1;0.971986!10014-101C5;0.883416!10070-101I7;0.839452!10452-106G2;0.727967!10453-106G3;0.153953!10449-106F8;0.175975!10042-101F6;0.148389!10069-101I6;0.320654!10193-103E4;0.857585!10631-108I1;0.361724!10438-106E6;0.315757!10488-107B2;0.764294!10196-103E7;0.858723!10071-101I8;0.809477!10071-101I8;0.498339!10041-101F5;0.0707339!10451-106G1;0.892553!10450-106F9;0.488048!10604-108F1;0.49379!10605-108F2;0.593831!10606-108F3;0.501595!10603-108E9;0.276316!10497-107C2;0.425016!10448-106F7;0.271509!10643-109A4;0.954955!10426-106D3;0.262142!10431-106D8;0.97792!10197-103E8;0.865119!10443-106F2;0.553869!10815-111B5;0.832418!10816-111B6;0.69434!10817-111B7;0.99532!10015-101C6;0.733678!10410-106B5;0.745348!10054-101G9;0.944735!10758-110E2;0.52491!10711-109H9;0.0372372!10040-101F4;0.397948!10470-106I2;0.378669!10415-106C1;0.524729!10198-103E9;0.570951!10614-108G2;0.992581!10612-108F9;0.844318!10549-107H9;0.660063!10615-108G3;0.972053!10487-107B1;0.823021!10433-106E1;0.779041!10688-109F4;0.75517!10444-106F3;0.578358!10444-106F3;0.415574!10485-107A8;0.464958!10413-106B8;0.996797!10175-103C4;0.96886!10161-103A8;0.339577!12131-128D7;0.338436!10624-108H3;0.349335!10712-109I1;0.0559408!10205-103F7;0.495794!10206-103F8;0.618848!10207-103F9;0.44293!10050-101G5;0.908019!10051-101G6;0.492661!10016-101C7;0.200407!10046-101G1;0.315812!10778-110G4;0.971957!10633-108I3;0.22554!10818-111B8;0.348648!10819-111B9;0.758334!10820-111C1;0.785365!10484-107A7;0.744122!10808-111A7;0.474604!10169-103B7;0.511226!10153-102I9;0.287697!13425-144D5;0.192517!13433-144E4;0.195566!13437-144E8;0.314395!11904-125F5;0.224546!11905-125F6;0.737404!10039-101F3;0.834958!10791-110H8;0.317002!10017-101C8;0.482417!10045-101F9;0.896013!10509-107D5;0.170896!10839-111E2;0.509559!10692-109F8;0.906778!10079-102A7;0.323882!10078-102A6;0.629578!10721-110A1;0.323933!10569-108B2;0.860854!10570-108B3;0.386764!10571-108B4;0.543716!10647-109A8;0.406923!10752-110D5;0.608649!10782-110G8;0.606293!10726-110A6;0.0705292!10018-101C9;0.774327!10086-102B5;0.316242!10182-103D2;0.851222!10165-103B3;0.271594!10499-107C4;0.419329!10408-106B3;0.926625!10019-101D1;0.639134!10068-101I5;0.909889!10075-102A3;0.5094!10077-102A5;0.991902!10727-110A7;0.453975!10775-110G1;0.166244!10412-106B7;0.236456!12231-129F8;0.72417!12232-129F9;0.862653!12233-129G1;0.784142!12234-129G2;0.788691!10414-106B9;0.698922!10170-103B8;0.541858!10183-103D3;0.36719!10150-102I6;0.327908!10174-103C3;0.314628!10155-103A2;0.27297!10038-101F2;0.314981!10838-111E1;0.369312!10759-110E3;0.52535!10514-107E1;0.261724!10465-106H6;0.308335!10691-109F7;0.149799!10843-111E6;0.719753!10844-111E7;0.718156!11747-123G1;0.512611!11748-123G2;0.496663!11749-123G3;0.256012!11750-123G4;0.176306!11751-123G5;0.0358066!11840-124H4;0.103994!11752-123G6;0.145657!11753-123G7;0.716329!11754-123G8;0.118027!11755-123G9;0.169374!11756-123H1;0.569838!11833-124G6;0.404394!11760-123H5;0.913095!11836-124G9;0.0958859!11758-123H3;0.21123!11835-124G8;0.0445607!11762-123H7;0.202046!11838-124H2;0.303842!11757-123H2;0.0209452!11759-123H4;0.108372!11761-123H6;0.318975!11842-124H6;0.110521!11837-124H1;0.280062!10568-108B1;0.256202!13230-141I8;0.551757!13231-141I9;0.119911!10696-109G3;0.116099!10493-107B7;0.131213!10494-107B8;0.597198!10850-111F4;0.625441!10851-111F5;0.561818!10852-111F6;0.26727!10853-111F7;0.617089!10854-111F8;0.67505!10855-111F9;0.972387!10856-111G1;0.587359!10847-111F1;0.435618!10846-111E9;0.637441!10848-111F2;0.645975!10845-111E8;0.547886!10857-111G2;0.4443!10858-111G3;0.595452!10156-103A3;0.113034!11901-125F2;0.302887!11902-125F3;0.814435!11903-125F4;0.771773!10689-109F5;0.815195!10648-109A9;0.208312!10784-110H1;0.227448!10744-110C6;0.980922!10772-110F7;0.598616!10474-106I6;0.627571!10600-108E6;0.218009!10684-109E9;0.822472!12226-129F3;0.438799!12227-129F4;0.905072!10508-107D4;0.771775!10539-107G8;0.459195!10607-108F4;0.65184!10555-107I6;0.882021!10774-110F9;0.422025!10637-108I7;0.466193!10663-109C6;0.785735!10728-110A8;0.780421!10729-110A9;0.744982!10430-106D7;0.109802!10730-110B1;0.631652!10813-111B3;0.906799!10812-111B2;0.0740776!10037-101F1;0.410652!10172-103C1;0.375929!10163-103B1;0.342819!10076-102A4;0.268638!10073-102A1;0.363927!10036-101E9;0.103084!10195-103E6;0.406664!10277-104E7;0.330255!10434-106E2;0.380868!10550-107I1;0.236202!10545-107H5;0.913817!10544-107H4;0.511887!10704-109H2;0.812258!10510-107D6;0.160831!10558-107I9;0.310663!10020-101D2;0.316241!10732-110B3;0.401588!10049-101G4;0.283837!10698-109G5;0.954895!10437-106E5;0.413709!10417-106C3;0.952858!10035-101E8;0.70578!10171-103B9;0.346972!10157-103A4;0.40313!10034-101E7;0.340001!10072-101I9;0.387195!10199-103F1;0.0911406!10200-103F2;0.0191417!10697-109G4;0.894476!10723-110A3;0.654238!10179-103C8;0.514313!10160-103A7;0.216501!10180-103C9;0.252152!10162-103A9;0.450013!10021-101D3;0.517612!10840-111E3;0.196106!10706-109H4;0.525741!10033-101E6;0.295374!10032-101E5;0.451398!10490-107B4;0.423312!10439-106E7;0.443042!10022-101D4;0.0866924!10176-103C5;0.573142!10469-106I1;0.313451!10067-101I4;0.69394!10411-106B6;0.0860235!10471-106I3;0.687057!10030-101E3;0.705486!10475-106I7;0.412857!10787-110H4;0.979635!10477-106I9;0.541381!10695-109G2;0.506758!11771-123I7;0.0963516!11772-123I8;0.529075!11773-123I9;0.976808!10093-102C3;0.7891!10442-106F1;0.286621!10442-106F1;0.773021!10201-103F3;0.774589!10639-108I9;0.3551!11843-124H7;0.524159!11841-124H5;0.767511!10693-109F9;0.143116!10436-106E4;0.513422!10483-107A6;0.872759!10282-104F3;0.664038!10023-101D5;0.127209!10066-101I3;0.160373!10065-101I2;0.612933!10800-110I8;0.694775!10610-108F7;0.266764!10841-111E4;0.367675!10541-107H1;0.519693!10842-111E5;0.364956!10562-108A4;0.958226!10024-101D6;0.615642!10064-101I1;0.539993!10609-108F6;0.589472!10048-101G3;0.407349!10781-110G7;0.308761!10181-103D1;0.178749!10159-103A6;0.244469!10056-101H2;0.34362!10737-110B8;0.161525!10025-101D7;0.0144338!10044-101F8;0.748549!10424-106D1;0.911104!10463-106H4;0.520086!10616-108G4;0.653696!10486-107A9;0.397972!10062-101H8;0.231717!10202-103F4;0.163501!10158-103A5;0.0731902!10441-106E9;0.396715!10031-101E4;0.252695!10063-101H9;0.3273!10063-101H9;0.076633!11763-123H8;0.229718!11765-123I1;0.114984!11768-123I4;0.347377!10807-111A6;0.154229!10790-110H7;0.282568!10798-110I6;0.29566!10786-110H3;0.58823!10591-108D6;0.857466!10593-108D8;0.703007!10590-108D5;0.713602!10026-101D8;0.995517!10096-102C6;0.890014!10168-103B6;0.48421!10154-103A1;0.237221!10209-103G2;0.319345!10061-101H7;0.152437!10027-101D9;0.842703!10043-101F7;0.68958!10783-110G9;0.864603!10028-101E1;0.0631123!10060-101H6;0.541587!10203-103F5;0.95942!10059-101H5;0.198171!10047-101G2;0.621941!10029-101E2;0.467373!10058-101H4;0.529583!10418-106C4;0.583233!10492-107B6;0.875161!10694-109G1;0.716377!10797-110I5;0.0526506!10057-101H3;0.361316!10100-102D1;0.628005!10055-101H1;0.345876!10204-103F6;0.16005!10191-103E2;0.844372!10563-108A5;0.620851
|name=TATCCCATT,motif724,CNhs12020,T:620.0(21.73%),B:10085.6(13.95%),P:1e-28
|name=TATCCCATT,motif724,CNhs12020,T:620.0(21.73%),B:10085.6(13.95%),P:1e-28
|tomtom_result=HSF1#MA0319.1;0;0.0060416;2.8758;1;8;TATCCCATT;TGTTCCAT;-!Kr#MA0452.1;0;0.00940155;4.47514;1;9;TATCCCATT;TAACCCTTTTG;-!GATA2#MA0036.1;0;0.0136686;6.50627;1;5;TATCCCATT;TATCC;-!HMG-I/Y#MA0045.1;2;0.0180884;8.61006;1;9;TATCCCATT;GTTTTTCCATTTGTTG;-
}}
}}

Latest revision as of 14:06, 7 September 2012

Full Name: TATCCCATT,motif724,CNhs12020,T:620.0(21.73%),B:10085.6(13.95%),P:1e-28

Motif matrix
POACGT
145.88105.452.08416.64
2421.684.3258.2855.8
324.850.8432.86511.5
418.6486.0845.8869.44
544.02505.9237.232.86
635.96501.5840.9241.54
7523.929.1435.3431.62
849.636.5869.44464.38
945.8852.086.2515.84

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HSF1#MA0319.100.00604162.875818TATCCCATTTGTTCCAT-
Kr#MA0452.100.009401554.4751419TATCCCATTTAACCCTTTTG-
GATA2#MA0036.100.01366866.5062715TATCCCATTTATCC-
HMG-I/Y#MA0045.120.01808848.6100619TATCCCATTGTTTTTCCATTTGTTG-
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