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MacroAPE 1083:Motif897: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;20527;0;64981;0!02;0;0;0;85508!03;0;0;85508;0!04;0;0;24706;60802!05;0;0;0;85508!06;0;0;0;85508 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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-106D6;0.808025!10464-106H5;0.506754!10827-111C8;0.850021!10789-110H6;0.24382!10828-111C9;0.535763!10788-110H5;0.753294!10792-110H9;0.912127!10765-110E9;0.397043!10829-111D1;0.269466!10830-111D2;0.487847!10831-111D3;0.853441!10832-111D4;0.87323!10833-111D5;0.299479!10764-110E8;0.434143!10770-110F5;0.753859!10399-106A3;0.622959!10400-106A4;0.772407!10405-106A9;0.846405!10834-111D6;0.707836!10835-111D7;0.692585!10836-111D8;0.441733!10837-111D9;0.760437!10699-109G6;0.99874!10802-111A1;0.633361!10796-110I4;0.576128!10010-101C1;0.443168!10810-111A9;0.326052!10421-106C7;0.642137!10708-109H6;0.512661!12235-129G3;0.513903!12236-129G4;0.534011!12237-129G5;0.304411!10167-103B5;0.87711!10151-102I7;0.383478!10428-106D5;0.464494!10795-110I3;0.310208!10805-111A4;0.183911!10052-101G7;0.0649172!10189-103D9;0.712355!10589-108D4;0.156317!10425-106D2;0.594601!10427-106D4;0.769158!10702-109G9;0.510521!10432-106D9;0.725186!10496-107C1;0.832923!10718-109I7;0.272881!10011-101C2;0.28537!10053-101G8;0.518235!10686-109F2;0.114001!10084-102B3;0.254119!10012-101C3;0.178414!10085-102B4;0.25117!10482-107A5;0.350103!10419-106C5;0.458092!10080-102A8;0.241278!10760-110E4;0.754625!10709-109H7;0.705921!10710-109H8;0.762169!10703-109H1;0.260954!10719-109I8;0.11533!10642-109A3;0.624017!10177-103C6;0.0085403!10164-103B2;0.444668!10173-103C2;0.443299!10166-103B4;0.244717!10083-102B2;0.314857!10188-103D8;0.15409!10552-107I3;0.467519!10553-107I4;0.579744!10013-101C4;0.459702!10536-107G5;0.647614!10618-108G6;0.854592!10423-106C9;0.230757!10785-110H2;0.570678!12238-129G6;0.156779!12239-129G7;0.865762!12240-129G8;0.728245!10416-106C2;0.994498!10801-110I9;0.360766!10766-110F1;0.23295!10824-111C5;0.262162!10825-111C6;0.830415!10826-111C7;0.787353!10454-106G4;0.575411!10409-106B4;0.715516!10638-108I8;0.306268!10636-108I6;0.523532!10513-107D9;0.499515!10420-106C6;0.951279!10082-102B1;0.0902771!10014-101C5;0.411217!10070-101I7;0.104669!10452-106G2;0.259936!10453-106G3;0.55182!10449-106F8;0.942821!10042-101F6;0.959122!10069-101I6;0.632844!10193-103E4;0.47591!10631-108I1;0.361444!10438-106E6;0.823498!10488-107B2;0.66556!10196-103E7;0.155079!10071-101I8;0.43602!10071-101I8;0.41838!10041-101F5;0.135375!10451-106G1;0.405802!10450-106F9;0.814188!10604-108F1;0.458598!10605-108F2;0.248752!10606-108F3;0.505433!10603-108E9;0.367905!10497-107C2;0.261296!10448-106F7;0.72222!10643-109A4;0.959278!10426-106D3;0.202142!10431-106D8;0.167999!10197-103E8;0.035551!10443-106F2;0.439318!10815-111B5;0.550608!10816-111B6;0.729235!10817-111B7;0.700666!10015-101C6;0.646962!10410-106B5;0.539548!10054-101G9;0.712619!10758-110E2;0.253801!10711-109H9;0.73181!10040-101F4;0.980658!10470-106I2;0.310391!10415-106C1;0.299395!10198-103E9;0.613256!10614-108G2;0.662441!10612-108F9;0.921519!10549-107H9;0.745979!10615-108G3;0.397847!10487-107B1;0.386204!10433-106E1;0.531811!10688-109F4;0.541742!10444-106F3;0.665549!10444-106F3;0.413189!10485-107A8;0.531081!10413-106B8;0.785068!10175-103C4;0.833367!10161-103A8;0.304335!12131-128D7;0.596509!10624-108H3;0.541232!10712-109I1;0.924531!10205-103F7;0.220688!10206-103F8;0.76009!10207-103F9;0.533243!10050-101G5;0.689203!10051-101G6;0.0400099!10016-101C7;0.258629!10046-101G1;0.46023!10778-110G4;0.316988!10633-108I3;0.836533!10818-111B8;0.843489!10819-111B9;0.104148!10820-111C1;0.121615!10484-107A7;0.123086!10808-111A7;0.662913!10169-103B7;0.802959!10153-102I9;0.223205!13425-144D5;0.550245!13433-144E4;0.013857!13437-144E8;0.0131767!11904-125F5;0.0168806!11905-125F6;0.567945!10039-101F3;0.704792!10791-110H8;0.314582!10017-101C8;0.988171!10045-101F9;0.258655!10509-107D5;0.694722!10839-111E2;0.590946!10692-109F8;0.0696886!10079-102A7;0.190289!10078-102A6;0.38313!10721-110A1;0.399509!10569-108B2;0.142122!10570-108B3;0.905555!10571-108B4;0.764942!10647-109A8;0.670378!10752-110D5;0.779713!10782-110G8;0.406434!10726-110A6;0.890422!10018-101C9;0.961933!10086-102B5;0.507375!10182-103D2;0.964013!10165-103B3;0.215781!10499-107C4;0.350803!10408-106B3;0.685442!10019-101D1;0.866326!10068-101I5;0.276574!10075-102A3;0.586209!10077-102A5;0.306609!10727-110A7;0.00110627!10775-110G1;0.200279!10412-106B7;0.481441!12231-129F8;0.553964!12232-129F9;0.286902!12233-129G1;0.434684!12234-129G2;0.450775!10414-106B9;0.391159!10170-103B8;0.813435!10183-103D3;0.218601!10150-102I6;0.291445!10174-103C3;0.497071!10155-103A2;0.815205!10038-101F2;0.701192!10838-111E1;0.497585!10759-110E3;0.485416!10514-107E1;0.89598!10465-106H6;0.812791!10691-109F7;0.333115!10843-111E6;0.000274454!10844-111E7;0.709603!11747-123G1;0.751645!11748-123G2;0.919397!11749-123G3;0.816427!11750-123G4;0.824181!11751-123G5;0.529464!11840-124H4;0.679699!11752-123G6;0.996432!11753-123G7;0.432267!11754-123G8;0.94411!11755-123G9;0.76223!11756-123H1;0.944894!11833-124G6;0.358882!11760-123H5;0.26836!11836-124G9;0.340492!11758-123H3;0.916093!11835-124G8;0.747782!11762-123H7;0.4223!11838-124H2;0.52217!11757-123H2;0.310244!11759-123H4;0.952422!11761-123H6;0.262311!11842-124H6;0.437189!11837-124H1;0.420984!10568-108B1;0.287829!13230-141I8;0.402642!13231-141I9;0.720086!10696-109G3;0.785648!10493-107B7;0.515692!10494-107B8;0.599581!10850-111F4;0.251544!10851-111F5;0.734822!10852-111F6;0.656638!10853-111F7;0.774109!10854-111F8;0.32999!10855-111F9;0.13266!10856-111G1;0.152199!10847-111F1;0.606944!10846-111E9;0.8346!10848-111F2;0.175711!10845-111E8;0.344758!10857-111G2;0.512528!10858-111G3;0.378674!10156-103A3;0.198907!11901-125F2;0.504252!11902-125F3;0.248954!11903-125F4;0.390417!10689-109F5;0.291345!10648-109A9;0.486087!10784-110H1;0.481692!10744-110C6;0.882482!10772-110F7;0.253211!10474-106I6;0.345267!10600-108E6;0.166456!10684-109E9;0.304141!12226-129F3;0.153068!12227-129F4;0.11513!10508-107D4;0.00127819!10539-107G8;0.0617862!10607-108F4;0.138489!10555-107I6;0.263818!10774-110F9;0.0410592!10637-108I7;0.794273!10663-109C6;0.72938!10728-110A8;0.730011!10729-110A9;0.625296!10430-106D7;0.961075!10730-110B1;0.980883!10813-111B3;0.0940155!10812-111B2;0.272406!10037-101F1;0.299685!10172-103C1;0.337025!10163-103B1;0.347273!10076-102A4;0.583227!10073-102A1;0.357106!10036-101E9;0.105318!10195-103E6;0.357019!10277-104E7;0.287957!10434-106E2;0.715739!10550-107I1;0.414985!10545-107H5;0.243361!10544-107H4;0.53366!10704-109H2;0.39156!10510-107D6;0.576972!10558-107I9;0.346227!10020-101D2;0.123276!10732-110B3;0.568255!10049-101G4;0.97552!10698-109G5;0.253438!10437-106E5;0.764899!10417-106C3;0.347482!10035-101E8;0.846175!10171-103B9;0.305083!10157-103A4;0.313896!10034-101E7;0.461657!10072-101I9;0.294797!10199-103F1;0.0862105!10200-103F2;0.359706!10697-109G4;0.980008!10723-110A3;0.689635!10179-103C8;0.371532!10160-103A7;0.594825!10180-103C9;0.636978!10162-103A9;0.887512!10021-101D3;0.736756!10840-111E3;0.999408!10706-109H4;0.660043!10033-101E6;0.784071!10032-101E5;0.233926!10490-107B4;0.262269!10439-106E7;0.108502!10022-101D4;0.813532!10176-103C5;0.525586!10469-106I1;0.301476!10067-101I4;0.534241!10411-106B6;0.942173!10471-106I3;0.695872!10030-101E3;0.732332!10475-106I7;0.90204!10787-110H4;0.241663!10477-106I9;0.488077!10695-109G2;0.572351!11771-123I7;0.516535!11772-123I8;0.147155!11773-123I9;0.239722!10093-102C3;0.452587!10442-106F1;0.240065!10442-106F1;0.251943!10201-103F3;0.255248!10639-108I9;0.515091!11843-124H7;0.423662!11841-124H5;0.0182293!10693-109F9;0.115676!10436-106E4;0.307856!10483-107A6;0.587445!10282-104F3;0.908433!10023-101D5;0.99803!10066-101I3;0.892914!10065-101I2;0.541588!10800-110I8;0.506422!10610-108F7;0.924066!10841-111E4;0.559695!10541-107H1;0.46545!10842-111E5;0.992965!10562-108A4;0.105031!10024-101D6;0.598361!10064-101I1;0.103954!10609-108F6;0.784175!10048-101G3;0.34175!10781-110G7;0.50533!10181-103D1;0.973659!10159-103A6;0.412304!10056-101H2;0.923214!10737-110B8;0.161555!10025-101D7;0.955919!10044-101F8;0.0257215!10424-106D1;0.360147!10463-106H4;0.499319!10616-108G4;0.968566!10486-107A9;0.644069!10062-101H8;0.940981!10202-103F4;0.660897!10158-103A5;0.230866!10441-106E9;0.90996!10031-101E4;0.735287!10063-101H9;0.34978!10063-101H9;0.0831186!11763-123H8;0.59563!11765-123I1;0.664279!11768-123I4;0.928456!10807-111A6;0.853329!10790-110H7;0.0202094!10798-110I6;0.120406!10786-110H3;0.216811!10591-108D6;0.0178524!10593-108D8;0.0196577!10590-108D5;0.164238!10026-101D8;0.183989!10096-102C6;0.834491!10168-103B6;0.572421!10154-103A1;0.20691!10209-103G2;0.538578!10061-101H7;0.903818!10027-101D9;0.60414!10043-101F7;0.319992!10783-110G9;0.16465!10028-101E1;0.485949!10060-101H6;0.326262!10203-103F5;0.990007!10059-101H5;0.860489!10047-101G2;0.329722!10029-101E2;0.33758!10058-101H4;0.618519!10418-106C4;0.620447!10492-107B6;0.442337!10694-109G1;0.722278!10797-110I5;0.731601!10057-101H3;0.996011!10100-102D1;0.312796!10055-101H1;0.571109!10204-103F6;0.547063!10191-103E2;0.713443!10563-108A5;0.304347
|name=motif897
|name=motif897
|tomtom_result=slp1#MA0458.1;0;0.00127495;0.606874;0.488661;6;GTGTTT;TTGTTTACATT;+!mirr#MA0233.1;-1;0.00208404;0.992005;0.488661;5;GTGTTT;TGTTT;-!FOXD1#MA0031.1;0;0.00240766;1.14604;0.488661;6;GTGTTT;ATGTTTAC;-!FKH2#MA0297.1;-1;0.00256572;1.22128;0.488661;5;GTGTTT;TGTTTAC;-!ara#MA0210.1;-1;0.00330817;1.57469;0.488661;5;GTGTTT;TGTTA;-!FOXO3#MA0157.1;-1;0.00380205;1.80978;0.488661;5;GTGTTT;TGTTTACA;-!FOXI1#MA0042.1;2;0.00401241;1.90991;0.488661;6;GTGTTT;GGATGTTTGTTT;+!RREB1#MA0073.1;9;0.00417158;1.98567;0.488661;6;GTGTTT;TGGGGGGGGGTGGTTTGGGG;-!MAX#MA0058.1;4;0.00527885;2.51273;0.488661;6;GTGTTT;TCACGTGGTC;-!STE12#MA0393.1;-1;0.00542637;2.58295;0.488661;5;GTGTTT;TGTTTCA;-!HCM1#MA0317.1;0;0.00566567;2.69686;0.488661;6;GTGTTT;TTGTTTAT;-!RUNX1#MA0002.2;4;0.00667934;3.17936;0.528082;6;GTGTTT;GTCTGTGGTTT;+!FOXA1#MA0148.1;-1;0.00795416;3.78618;0.580497;5;GTGTTT;TGTTTACTTTG;+!fkh#MA0446.1;-1;0.00888215;4.2279;0.60192;5;GTGTTT;TGTTTGCTTAA;+!caup#MA0217.1;-1;0.00995172;4.73702;0.629442;5;GTGTTT;TGTTA;-!FOXF2#MA0030.1;1;0.0111879;5.32544;0.663404;6;GTGTTT;ATTGTTTACGTTTG;-!RUNX1#MA0002.2;4;0.0120791;5.74965;0.674115;6;GTGTTT;TATTGTGGTTA;+!Foxa2#MA0047.2;-1;0.0133293;6.34475;0.702561;5;GTGTTT;TGTTTACTTAGG;+!lin-14#MA0261.1;0;0.0140924;6.70799;0.703689;6;GTGTTT;GTGTTC;-!YAP5#MA0417.1;0;0.0168269;8.00962;0.769452;6;GTGTTT;ATGCTT;-!Foxq1#MA0040.1;2;0.0170315;8.10697;0.769452;6;GTGTTT;TATTGTTTATT;+!Foxd3#MA0041.1;2;0.018761;8.93023;0.809062;6;GTGTTT;GAATGTTTGTTT;+
}}
}}

Latest revision as of 14:13, 7 September 2012

Full Name: motif897

Motif matrix
POACGT
01205270649810
0200085508
0300855080
04002470660802
0500085508
0600085508

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
slp1#MA0458.100.001274950.6068740.4886616GTGTTTTTGTTTACATT+
mirr#MA0233.1-10.002084040.9920050.4886615GTGTTTTGTTT-
FOXD1#MA0031.100.002407661.146040.4886616GTGTTTATGTTTAC-
FKH2#MA0297.1-10.002565721.221280.4886615GTGTTTTGTTTAC-
ara#MA0210.1-10.003308171.574690.4886615GTGTTTTGTTA-
FOXO3#MA0157.1-10.003802051.809780.4886615GTGTTTTGTTTACA-
FOXI1#MA0042.120.004012411.909910.4886616GTGTTTGGATGTTTGTTT+
RREB1#MA0073.190.004171581.985670.4886616GTGTTTTGGGGGGGGGTGGTTTGGGG-
MAX#MA0058.140.005278852.512730.4886616GTGTTTTCACGTGGTC-
STE12#MA0393.1-10.005426372.582950.4886615GTGTTTTGTTTCA-
HCM1#MA0317.100.005665672.696860.4886616GTGTTTTTGTTTAT-
RUNX1#MA0002.240.006679343.179360.5280826GTGTTTGTCTGTGGTTT+
FOXA1#MA0148.1-10.007954163.786180.5804975GTGTTTTGTTTACTTTG+
fkh#MA0446.1-10.008882154.22790.601925GTGTTTTGTTTGCTTAA+
caup#MA0217.1-10.009951724.737020.6294425GTGTTTTGTTA-
FOXF2#MA0030.110.01118795.325440.6634046GTGTTTATTGTTTACGTTTG-
RUNX1#MA0002.240.01207915.749650.6741156GTGTTTTATTGTGGTTA+
Foxa2#MA0047.2-10.01332936.344750.7025615GTGTTTTGTTTACTTAGG+
lin-14#MA0261.100.01409246.707990.7036896GTGTTTGTGTTC-
YAP5#MA0417.100.01682698.009620.7694526GTGTTTATGCTT-
Foxq1#MA0040.120.01703158.106970.7694526GTGTTTTATTGTTTATT+
Foxd3#MA0041.120.0187618.930230.8090626GTGTTTGAATGTTTGTTT+
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