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MacroAPE 1083:Motif GTAANC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;480;0!02;0;0;0;480!03;480;0;0;0!04;480;0;0;0!05;120;120;120;120!06;0;480;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.397916!11327-...")
 
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!10464-106H5;0.791634!10827-111C8;0.705993!10789-110H6;0.917636!10828-111C9;0.628342!10788-110H5;0.61982!10792-110H9;0.871441!10765-110E9;0.484609!10829-111D1;0.384849!10830-111D2;0.74533!10831-111D3;0.50331!10832-111D4;0.798751!10833-111D5;0.797834!10764-110E8;0.947407!10770-110F5;0.705568!10399-106A3;0.762893!10400-106A4;0.679613!10405-106A9;0.70945!10834-111D6;0.588846!10835-111D7;0.673346!10836-111D8;0.833287!10837-111D9;0.646327!10699-109G6;0.425235!10802-111A1;0.993025!10796-110I4;0.78749!10010-101C1;0.296627!10810-111A9;0.190707!10421-106C7;0.436097!10708-109H6;0.967701!12235-129G3;0.244842!12236-129G4;0.371231!12237-129G5;0.208639!10167-103B5;0.169677!10151-102I7;0.333992!10428-106D5;0.390389!10795-110I3;0.802355!10805-111A4;0.764718!10052-101G7;0.871926!10189-103D9;0.327156!10589-108D4;0.00535226!10425-106D2;0.606417!10427-106D4;0.54782!10702-109G9;0.545577!10432-106D9;0.706827!10496-107C1;0.67985!10718-109I7;0.75576!10011-101C2;0.67893!10053-101G8;0.334497!10686-109F2;0.256863!10084-102B3;0.560701!10012-101C3;0.337226!10085-102B4;0.394958!10482-107A5;0.857671!10419-106C5;0.709243!10080-102A8;0.911569!10760-110E4;0.149309!10709-109H7;0.314171!10710-109H8;0.475497!10703-109H1;0.49751!10719-109I8;0.445088!10642-109A3;0.949611!10177-103C6;0.646582!10164-103B2;0.710373!10173-103C2;0.529395!10166-103B4;0.696744!10083-102B2;0.904229!10188-103D8;0.511265!10552-107I3;0.507029!10553-107I4;0.856855!10013-101C4;0.880878!10536-107G5;0.0695477!10618-108G6;0.531398!10423-106C9;0.210151!10785-110H2;0.778266!12238-129G6;0.54921!12239-129G7;0.694177!12240-129G8;0.541518!10416-106C2;0.460285!10801-110I9;0.525009!10766-110F1;0.18186!10824-111C5;0.777258!10825-111C6;0.434229!10826-111C7;0.486959!10454-106G4;0.467431!10409-106B4;0.71118!10638-108I8;0.69435!10636-108I6;0.382492!10513-107D9;0.334292!10420-106C6;0.597326!10082-102B1;0.485481!10014-101C5;0.00329721!10070-101I7;0.0743837!10452-106G2;0.0209042!10453-106G3;0.443761!10449-106F8;0.277482!10042-101F6;0.26965!10069-101I6;0.667148!10193-103E4;0.17274!10631-108I1;0.338695!10438-106E6;0.849738!10488-107B2;0.762157!10196-103E7;0.473759!10071-101I8;0.190664!10071-101I8;0.0488885!10041-101F5;0.864967!10451-106G1;0.178049!10450-106F9;0.630933!10604-108F1;0.513778!10605-108F2;0.721893!10606-108F3;0.427506!10603-108E9;0.651105!10497-107C2;0.507079!10448-106F7;0.406346!10643-109A4;0.539019!10426-106D3;0.759501!10431-106D8;0.884712!10197-103E8;0.380721!10443-106F2;0.484859!10815-111B5;0.637516!10816-111B6;0.428165!10817-111B7;0.557248!10015-101C6;0.43191!10410-106B5;0.430902!10054-101G9;0.67979!10758-110E2;0.32494!10711-109H9;0.0890018!10040-101F4;0.471697!10470-106I2;0.428382!10415-106C1;0.743897!10198-103E9;0.927574!10614-108G2;0.291786!10612-108F9;0.542169!10549-107H9;0.147488!10615-108G3;0.522832!10487-107B1;0.530614!10433-106E1;0.753213!10688-109F4;0.61514!10444-106F3;0.46128!10444-106F3;0.656727!10485-107A8;0.659147!10413-106B8;0.962776!10175-103C4;0.451413!10161-103A8;0.322414!12131-128D7;0.456543!10624-108H3;0.160772!10712-109I1;0.986455!10205-103F7;0.457572!10206-103F8;0.520603!10207-103F9;0.512655!10050-101G5;0.660402!10051-101G6;0.964105!10016-101C7;0.701843!10046-101G1;0.608495!10778-110G4;0.250769!10633-108I3;0.874656!10818-111B8;0.77067!10819-111B9;0.643515!10820-111C1;0.624079!10484-107A7;0.720673!10808-111A7;0.934382!10169-103B7;0.397523!10153-102I9;0.280056!13425-144D5;0.498356!13433-144E4;0.692593!13437-144E8;0.73376!11904-125F5;0.700686!11905-125F6;0.540585!10039-101F3;0.785977!10791-110H8;0.352565!10017-101C8;0.803389!10045-101F9;0.962084!10509-107D5;0.6841!10839-111E2;0.861929!10692-109F8;0.134947!10079-102A7;0.995438!10078-102A6;0.450255!10721-110A1;0.58617!10569-108B2;0.810866!10570-108B3;0.313175!10571-108B4;0.533429!10647-109A8;0.407181!10752-110D5;0.670308!10782-110G8;0.949311!10726-110A6;0.891657!10018-101C9;0.630573!10086-102B5;0.719056!10182-103D2;0.950691!10165-103B3;0.429398!10499-107C4;0.421002!10408-106B3;0.688436!10019-101D1;0.0794216!10068-101I5;0.212557!10075-102A3;0.0633421!10077-102A5;0.191007!10727-110A7;0.0651465!10775-110G1;0.449507!10412-106B7;0.733318!12231-129F8;0.780932!12232-129F9;0.145609!12233-129G1;0.187451!12234-129G2;0.189264!10414-106B9;0.154765!10170-103B8;0.716238!10183-103D3;0.23344!10150-102I6;0.401397!10174-103C3;0.429114!10155-103A2;0.768276!10038-101F2;0.715473!10838-111E1;0.549723!10759-110E3;0.905413!10514-107E1;0.802279!10465-106H6;0.727741!10691-109F7;0.802738!10843-111E6;0.312892!10844-111E7;0.684977!11747-123G1;0.485832!11748-123G2;0.594225!11749-123G3;0.693461!11750-123G4;0.600051!11751-123G5;0.938188!11840-124H4;0.787795!11752-123G6;0.925336!11753-123G7;0.906687!11754-123G8;0.675028!11755-123G9;0.856558!11756-123H1;0.278657!11833-124G6;0.932506!11760-123H5;0.992557!11836-124G9;0.618957!11758-123H3;0.549432!11835-124G8;0.503355!11762-123H7;0.918888!11838-124H2;0.863955!11757-123H2;0.558521!11759-123H4;0.582648!11761-123H6;0.762649!11842-124H6;0.570292!11837-124H1;0.968445!10568-108B1;0.998763!13230-141I8;0.0541926!13231-141I9;0.863541!10696-109G3;0.895888!10493-107B7;0.698525!10494-107B8;0.688306!10850-111F4;0.843814!10851-111F5;0.541102!10852-111F6;0.955838!10853-111F7;0.43432!10854-111F8;0.622127!10855-111F9;0.699085!10856-111G1;0.325278!10847-111F1;0.443519!10846-111E9;0.108148!10848-111F2;0.147429!10845-111E8;0.504637!10857-111G2;0.0389206!10858-111G3;0.821223!10156-103A3;0.389342!11901-125F2;0.375902!11902-125F3;0.207342!11903-125F4;0.259087!10689-109F5;0.229381!10648-109A9;0.589075!10784-110H1;0.59995!10744-110C6;0.41516!10772-110F7;0.497248!10474-106I6;0.691932!10600-108E6;0.784942!10684-109E9;0.442137!12226-129F3;0.384561!12227-129F4;0.276551!10508-107D4;0.917844!10539-107G8;0.327868!10607-108F4;0.327038!10555-107I6;0.917847!10774-110F9;0.306518!10637-108I7;0.582836!10663-109C6;0.890853!10728-110A8;0.936387!10729-110A9;0.675955!10430-106D7;0.82304!10730-110B1;0.685541!10813-111B3;0.655851!10812-111B2;0.904755!10037-101F1;0.929131!10172-103C1;0.46416!10163-103B1;0.408914!10076-102A4;0.508627!10073-102A1;0.420601!10036-101E9;0.994086!10195-103E6;0.363457!10277-104E7;0.434381!10434-106E2;0.668467!10550-107I1;0.390163!10545-107H5;0.714171!10544-107H4;0.481141!10704-109H2;0.850406!10510-107D6;0.547649!10558-107I9;0.842403!10020-101D2;0.465273!10732-110B3;0.280128!10049-101G4;0.517305!10698-109G5;0.490951!10437-106E5;0.512544!10417-106C3;0.733645!10035-101E8;0.36461!10171-103B9;0.391599!10157-103A4;0.348961!10034-101E7;0.461!10072-101I9;0.340654!10199-103F1;0.902105!10200-103F2;0.704856!10697-109G4;0.418286!10723-110A3;0.701577!10179-103C8;0.392095!10160-103A7;0.477668!10180-103C9;0.394929!10162-103A9;0.486263!10021-101D3;0.359616!10840-111E3;0.529387!10706-109H4;0.866503!10033-101E6;0.0204936!10032-101E5;0.474405!10490-107B4;0.31404!10439-106E7;0.364209!10022-101D4;0.159556!10176-103C5;0.191899!10469-106I1;0.363853!10067-101I4;0.428599!10411-106B6;0.174938!10471-106I3;0.0716773!10030-101E3;0.959201!10475-106I7;0.515076!10787-110H4;0.950469!10477-106I9;0.276155!10695-109G2;0.472783!11771-123I7;0.261332!11772-123I8;0.562681!11773-123I9;0.764682!10093-102C3;0.329269!10442-106F1;0.307879!10442-106F1;0.669688!10201-103F3;0.814298!10639-108I9;0.435942!11843-124H7;0.887049!11841-124H5;0.380643!10693-109F9;0.125721!10436-106E4;0.991741!10483-107A6;0.219178!10282-104F3;0.293945!10023-101D5;0.677562!10066-101I3;0.590006!10065-101I2;0.435677!10800-110I8;0.256709!10610-108F7;0.699707!10841-111E4;0.874691!10541-107H1;0.271929!10842-111E5;0.371171!10562-108A4;0.996104!10024-101D6;0.540259!10064-101I1;0.175498!10609-108F6;0.414648!10048-101G3;0.851864!10781-110G7;0.229896!10181-103D1;0.662818!10159-103A6;0.75009!10056-101H2;0.958158!10737-110B8;0.776567!10025-101D7;0.745339!10044-101F8;0.290825!10424-106D1;0.243988!10463-106H4;0.869463!10616-108G4;0.95649!10486-107A9;0.341692!10062-101H8;0.93007!10202-103F4;0.0115315!10158-103A5;0.427177!10441-106E9;0.759664!10031-101E4;0.657492!10063-101H9;0.26569!10063-101H9;0.965845!11763-123H8;0.219913!11765-123I1;0.511959!11768-123I4;0.279532!10807-111A6;0.718729!10790-110H7;0.614937!10798-110I6;0.428164!10786-110H3;0.268936!10591-108D6;0.479921!10593-108D8;0.303592!10590-108D5;0.236491!10026-101D8;0.48521!10096-102C6;0.531726!10168-103B6;0.902653!10154-103A1;0.436818!10209-103G2;0.465206!10061-101H7;0.358712!10027-101D9;0.125407!10043-101F7;0.0891066!10783-110G9;0.0188531!10028-101E1;0.268178!10060-101H6;0.0596078!10203-103F5;0.146803!10059-101H5;0.639474!10047-101G2;0.515307!10029-101E2;0.171078!10058-101H4;0.146931!10418-106C4;0.0908956!10492-107B6;0.781307!10694-109G1;0.888309!10797-110I5;0.513792!10057-101H3;0.863386!10100-102D1;0.387379!10055-101H1;0.0407544!10204-103F6;0.136933!10191-103E2;0.275806!10563-108A5;0.283163
|name=motif_GTAANC
|name=motif_GTAANC
|tomtom_result=CIN5#MA0284.1;4;0.000739533;0.352018;0.289296;6;GTAAAC;TTACGTAATC;+!FKH2#MA0297.1;0;0.000913345;0.434752;0.289296;6;GTAAAC;GTAAACA;+!FOXD1#MA0031.1;0;0.000922142;0.438939;0.289296;6;GTAAAC;GTAAACAT;+!CAD1#MA0279.1;4;0.00127511;0.60695;0.289296;6;GTAAAC;ATTAGTAAGC;+!YAP7#MA0419.1;4;0.00152993;0.728247;0.289296;6;GTAAAC;ATTAGTAAGCA;+!FOXO3#MA0157.1;1;0.00195084;0.928598;0.307404;6;GTAAAC;TGTAAACA;+!YAP6#MA0418.1;11;0.00382044;1.81853;0.451507;6;GTAAAC;GGTCTGATTACGTAAGCGAC;+!FOXF2#MA0030.1;5;0.00523818;2.49337;0.462761;6;GTAAAC;CAAACGTAAACAAT;+!HLF#MA0043.1;6;0.00557254;2.65253;0.462761;6;GTAAAC;TATTACGTAACC;-!Foxa2#MA0047.2;5;0.00557254;2.65253;0.462761;6;GTAAAC;CCTAAGTAAACA;-!br_Z4#MA0013.1;2;0.00630181;2.99966;0.462761;6;GTAAAC;TAGTAAACAAA;+!FKH1#MA0296.1;6;0.00636297;3.02877;0.462761;6;GTAAAC;TGAATTGTAAACAAAGAGGA;+!slp1#MA0458.1;3;0.00718069;3.41801;0.472322;6;GTAAAC;AATGTAAACAA;-!FOXA1#MA0148.1;4;0.00749357;3.56694;0.472322;6;GTAAAC;CAAAGTAAACA;-!NFIL3#MA0025.1;4;0.00849436;4.04331;0.501939;6;GTAAAC;TTATGTAACGT;+!YAP1#MA0415.1;10;0.0107769;5.12979;0.599355;6;GTAAAC;ACGAGCTTACGTAAGCAAAT;-!HMRA2#MA0318.1;3;0.0142141;6.7659;0.707303;5;GTAAAC;CATGTAAT;+!oc#MA0234.1;-1;0.0165806;7.89238;0.783812;5;GTAAAC;TAATCC;+!REB1#MA0363.1;4;0.017934;8.53656;0.807416;5;GTAAAC;CCGGGTAAC;-!bcd#MA0212.1;-1;0.0189741;9.03167;0.815415;5;GTAAAC;TAATCC;+!YAP3#MA0416.1;3;0.0206708;9.8393;0.821078;5;GTAAAC;TACGTAAT;-!Gsc#MA0190.1;-1;0.0208428;9.92115;0.821078;5;GTAAAC;TAATCC;+
}}
}}

Latest revision as of 14:18, 7 September 2012

Full Name: motif_GTAANC

Motif matrix
POACGT
01004800
02000480
03480000
04480000
05120120120120
06048000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CIN5#MA0284.140.0007395330.3520180.2892966GTAAACTTACGTAATC+
FKH2#MA0297.100.0009133450.4347520.2892966GTAAACGTAAACA+
FOXD1#MA0031.100.0009221420.4389390.2892966GTAAACGTAAACAT+
CAD1#MA0279.140.001275110.606950.2892966GTAAACATTAGTAAGC+
YAP7#MA0419.140.001529930.7282470.2892966GTAAACATTAGTAAGCA+
FOXO3#MA0157.110.001950840.9285980.3074046GTAAACTGTAAACA+
YAP6#MA0418.1110.003820441.818530.4515076GTAAACGGTCTGATTACGTAAGCGAC+
FOXF2#MA0030.150.005238182.493370.4627616GTAAACCAAACGTAAACAAT+
HLF#MA0043.160.005572542.652530.4627616GTAAACTATTACGTAACC-
Foxa2#MA0047.250.005572542.652530.4627616GTAAACCCTAAGTAAACA-
br_Z4#MA0013.120.006301812.999660.4627616GTAAACTAGTAAACAAA+
FKH1#MA0296.160.006362973.028770.4627616GTAAACTGAATTGTAAACAAAGAGGA+
slp1#MA0458.130.007180693.418010.4723226GTAAACAATGTAAACAA-
FOXA1#MA0148.140.007493573.566940.4723226GTAAACCAAAGTAAACA-
NFIL3#MA0025.140.008494364.043310.5019396GTAAACTTATGTAACGT+
YAP1#MA0415.1100.01077695.129790.5993556GTAAACACGAGCTTACGTAAGCAAAT-
HMRA2#MA0318.130.01421416.76590.7073035GTAAACCATGTAAT+
oc#MA0234.1-10.01658067.892380.7838125GTAAACTAATCC+
REB1#MA0363.140.0179348.536560.8074165GTAAACCCGGGTAAC-
bcd#MA0212.1-10.01897419.031670.8154155GTAAACTAATCC+
YAP3#MA0416.130.02067089.83930.8210785GTAAACTACGTAAT-
Gsc#MA0190.1-10.02084289.921150.8210785GTAAACTAATCC+
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