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MacroAPE 1083:PAX5 motifB:GM12878-PAX5-ChIP-Seq/Homer: Difference between revisions

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111A8;0.728832!10597-108E3;0.707165!10717-109I6;0.841787!10455-106G5;0.595853!10534-107G3;0.827173!10429-106D6;0.828334!10464-106H5;0.726644!10827-111C8;0.575145!10789-110H6;0.576437!10828-111C9;0.735101!10788-110H5;0.784041!10792-110H9;0.966187!10765-110E9;0.472064!10829-111D1;0.922366!10830-111D2;0.643083!10831-111D3;0.0538545!10832-111D4;0.915956!10833-111D5;0.765251!10764-110E8;0.998008!10770-110F5;0.725001!10399-106A3;0.779196!10400-106A4;0.747945!10405-106A9;0.751036!10834-111D6;0.906691!10835-111D7;0.431908!10836-111D8;0.830133!10837-111D9;0.150661!10699-109G6;0.31301!10802-111A1;0.335846!10796-110I4;0.4372!10010-101C1;0.779074!10810-111A9;0.938973!10421-106C7;0.232118!10708-109H6;0.547921!12235-129G3;0.799821!12236-129G4;0.518732!12237-129G5;0.0126627!10167-103B5;0.888901!10151-102I7;0.17543!10428-106D5;0.490829!10795-110I3;0.734807!10805-111A4;0.717529!10052-101G7;0.254799!10189-103D9;0.589948!10589-108D4;0.901842!10425-106D2;0.401993!10427-106D4;0.751266!10702-109G9;0.0709597!10432-106D9;0.327702!10496-107C1;0.959069!10718-109I7;0.249382!10011-101C2;0.358284!10053-101G8;0.898576!10686-109F2;0.447844!10084-102B3;0.544304!10012-101C3;0.506847!10085-102B4;0.410308!10482-107A5;0.891698!10419-106C5;0.30778!10080-102A8;0.815084!10760-110E4;0.638496!10709-109H7;0.275856!10710-109H8;0.844247!10703-109H1;0.329277!10719-109I8;0.782798!10642-109A3;0.693583!10177-103C6;0.427106!10164-103B2;0.535358!10173-103C2;0.704346!10166-103B4;0.270263!10083-102B2;0.466088!10188-103D8;0.527282!10552-107I3;0.412885!10553-107I4;0.779964!10013-101C4;0.350638!10536-107G5;0.280559!10618-108G6;0.101716!10423-106C9;0.241633!10785-110H2;0.462792!12238-129G6;0.87938!12239-129G7;0.180931!12240-129G8;0.192259!10416-106C2;0.668682!10801-110I9;0.473173!10766-110F1;0.978606!10824-111C5;0.612049!10825-111C6;0.87194!10826-111C7;0.90819!10454-106G4;0.90087!10409-106B4;0.843305!10638-108I8;0.866007!10636-108I6;0.7103!10513-107D9;0.897712!10420-106C6;0.492708!10082-102B1;0.605003!10014-101C5;0.328726!10070-101I7;0.798635!10452-106G2;0.433804!10453-106G3;0.166247!10449-106F8;0.540294!10042-101F6;0.643708!10069-101I6;0.579973!10193-103E4;0.3214!10631-108I1;0.636849!10438-106E6;0.845432!10488-107B2;0.372708!10196-103E7;0.909038!10071-101I8;0.165862!10071-101I8;0.396383!10041-101F5;0.803679!10451-106G1;0.488475!10450-106F9;0.531859!10604-108F1;0.392984!10605-108F2;0.661313!10606-108F3;0.737032!10603-108E9;0.46497!10497-107C2;0.764388!10448-106F7;0.308084!10643-109A4;0.795546!10426-106D3;0.781215!10431-106D8;0.990325!10197-103E8;0.789567!10443-106F2;0.222193!10815-111B5;0.175108!10816-111B6;0.586078!10817-111B7;0.767962!10015-101C6;0.674083!10410-106B5;0.314496!10054-101G9;0.848519!10758-110E2;0.587773!10711-109H9;0.439211!10040-101F4;0.423358!10470-106I2;0.37517!10415-106C1;0.867784!10198-103E9;0.285907!10614-108G2;0.898203!10612-108F9;0.398407!10549-107H9;0.535995!10615-108G3;0.657549!10487-107B1;0.525167!10433-106E1;0.315863!10688-109F4;0.893995!10444-106F3;0.975777!10444-106F3;0.0077029!10485-107A8;0.0185674!10413-106B8;0.11437!10175-103C4;0.496517!10161-103A8;0.546067!12131-128D7;0.682113!10624-108H3;0.825683!10712-109I1;0.737001!10205-103F7;0.301845!10206-103F8;0.940632!10207-103F9;0.58199!10050-101G5;0.825689!10051-101G6;0.433411!10016-101C7;0.688336!10046-101G1;0.808987!10778-110G4;0.700861!10633-108I3;0.524236!10818-111B8;0.142979!10819-111B9;0.138314!10820-111C1;0.125468!10484-107A7;0.125478!10808-111A7;0.787299!10169-103B7;0.540312!10153-102I9;0.331156!13425-144D5;0.579072!13433-144E4;0.0168158!13437-144E8;0.025168!11904-125F5;0.0217268!11905-125F6;0.069344!10039-101F3;0.109287!10791-110H8;0.370887!10017-101C8;0.72832!10045-101F9;0.517606!10509-107D5;0.215631!10839-111E2;0.698352!10692-109F8;0.542353!10079-102A7;0.704655!10078-102A6;0.343087!10721-110A1;0.995035!10569-108B2;0.908417!10570-108B3;0.240209!10571-108B4;0.58414!10647-109A8;0.176502!10752-110D5;0.114862!10782-110G8;0.414886!10726-110A6;0.214443!10018-101C9;0.144025!10086-102B5;0.61888!10182-103D2;0.33784!10165-103B3;0.346289!10499-107C4;0.507924!10408-106B3;0.339469!10019-101D1;0.260889!10068-101I5;0.810319!10075-102A3;0.827753!10077-102A5;0.988789!10727-110A7;0.496226!10775-110G1;0.56746!10412-106B7;0.921772!12231-129F8;0.938599!12232-129F9;0.0654955!12233-129G1;0.248223!12234-129G2;0.0963274!10414-106B9;0.0787016!10170-103B8;0.628714!10183-103D3;0.209151!10150-102I6;0.35892!10174-103C3;0.554512!10155-103A2;0.796602!10038-101F2;0.610347!10838-111E1;0.494655!10759-110E3;0.730499!10514-107E1;0.105626!10465-106H6;0.753367!10691-109F7;0.429957!10843-111E6;0.667527!10844-111E7;0.142228!11747-123G1;0.335403!11748-123G2;0.645736!11749-123G3;0.252017!11750-123G4;0.774567!11751-123G5;0.393514!11840-124H4;0.912507!11752-123G6;0.619573!11753-123G7;0.126718!11754-123G8;0.165535!11755-123G9;0.702446!11756-123H1;0.59874!11833-124G6;0.525047!11760-123H5;0.0518673!11836-124G9;0.512302!11758-123H3;0.492575!11835-124G8;0.793549!11762-123H7;0.994115!11838-124H2;0.554158!11757-123H2;0.624907!11759-123H4;0.812591!11761-123H6;0.187451!11842-124H6;0.581303!11837-124H1;0.100248!10568-108B1;0.745268!13230-141I8;0.301497!13231-141I9;0.968753!10696-109G3;0.868517!10493-107B7;0.414793!10494-107B8;0.645783!10850-111F4;0.0940665!10851-111F5;0.171974!10852-111F6;0.0633896!10853-111F7;0.00814854!10854-111F8;0.243319!10855-111F9;0.0589347!10856-111G1;0.470259!10847-111F1;0.0163424!10846-111E9;0.458134!10848-111F2;0.363985!10845-111E8;0.327023!10857-111G2;0.92074!10858-111G3;0.442351!10156-103A3;0.705232!11901-125F2;0.53688!11902-125F3;0.0573938!11903-125F4;0.164877!10689-109F5;0.229871!10648-109A9;0.137209!10784-110H1;0.541287!10744-110C6;0.918807!10772-110F7;0.29295!10474-106I6;0.403945!10600-108E6;0.47495!10684-109E9;0.241109!12226-129F3;0.39173!12227-129F4;0.311903!10508-107D4;0.711187!10539-107G8;0.963405!10607-108F4;0.873475!10555-107I6;0.466253!10774-110F9;0.44925!10637-108I7;0.307603!10663-109C6;0.383484!10728-110A8;0.858761!10729-110A9;0.621253!10430-106D7;0.528851!10730-110B1;0.879925!10813-111B3;0.619116!10812-111B2;0.215025!10037-101F1;0.320919!10172-103C1;0.433144!10163-103B1;0.268857!10076-102A4;0.553266!10073-102A1;0.4749!10036-101E9;0.89711!10195-103E6;0.448966!10277-104E7;0.498738!10434-106E2;0.915146!10550-107I1;0.926632!10545-107H5;0.953026!10544-107H4;0.481507!10704-109H2;0.455925!10510-107D6;0.722427!10558-107I9;0.655794!10020-101D2;0.857021!10732-110B3;0.127705!10049-101G4;0.924063!10698-109G5;0.140777!10437-106E5;0.120005!10417-106C3;0.330211!10035-101E8;0.257741!10171-103B9;0.33907!10157-103A4;0.314733!10034-101E7;0.490353!10072-101I9;0.371858!10199-103F1;0.919584!10200-103F2;0.229075!10697-109G4;0.506069!10723-110A3;0.599877!10179-103C8;0.424892!10160-103A7;0.681403!10180-103C9;0.984953!10162-103A9;0.506356!10021-101D3;0.63817!10840-111E3;0.326165!10706-109H4;0.271901!10033-101E6;0.559141!10032-101E5;0.342414!10490-107B4;0.407051!10439-106E7;0.894737!10022-101D4;0.165337!10176-103C5;0.388047!10469-106I1;0.480174!10067-101I4;0.841911!10411-106B6;0.235675!10471-106I3;0.868557!10030-101E3;0.193522!10475-106I7;0.779433!10787-110H4;0.649538!10477-106I9;0.438974!10695-109G2;0.119625!11771-123I7;0.0927647!11772-123I8;0.848682!11773-123I9;0.427859!10093-102C3;0.313364!10442-106F1;0.399375!10442-106F1;0.416414!10201-103F3;0.620905!10639-108I9;0.208777!11843-124H7;0.926817!11841-124H5;0.531303!10693-109F9;0.865733!10436-106E4;0.385528!10483-107A6;0.128227!10282-104F3;0.750255!10023-101D5;0.959582!10066-101I3;0.795886!10065-101I2;0.228567!10800-110I8;0.152734!10610-108F7;0.648543!10841-111E4;0.63706!10541-107H1;0.997345!10842-111E5;0.16307!10562-108A4;0.860053!10024-101D6;0.804568!10064-101I1;0.99526!10609-108F6;0.373415!10048-101G3;0.519386!10781-110G7;0.708886!10181-103D1;0.674671!10159-103A6;0.642374!10056-101H2;0.51835!10737-110B8;0.894738!10025-101D7;0.321913!10044-101F8;0.546807!10424-106D1;0.673729!10463-106H4;0.084276!10616-108G4;0.905805!10486-107A9;0.664602!10062-101H8;0.895565!10202-103F4;0.269727!10158-103A5;0.391627!10441-106E9;0.430612!10031-101E4;0.472111!10063-101H9;0.465161!10063-101H9;0.969655!11763-123H8;0.813554!11765-123I1;0.270852!11768-123I4;0.375578!10807-111A6;0.821116!10790-110H7;0.292875!10798-110I6;0.327772!10786-110H3;0.346033!10591-108D6;0.436979!10593-108D8;0.95792!10590-108D5;0.967313!10026-101D8;0.386961!10096-102C6;0.444658!10168-103B6;0.935763!10154-103A1;0.352391!10209-103G2;0.515834!10061-101H7;0.557879!10027-101D9;0.0749104!10043-101F7;0.314802!10783-110G9;0.786327!10028-101E1;0.529614!10060-101H6;0.130065!10203-103F5;0.227508!10059-101H5;0.744215!10047-101G2;0.1903!10029-101E2;0.83999!10058-101H4;0.656713!10418-106C4;0.101732!10492-107B6;0.378283!10694-109G1;0.880064!10797-110I5;0.1157!10057-101H3;0.568766!10100-102D1;0.18776!10055-101H1;0.617701!10204-103F6;0.0190792!10191-103E2;0.382928!10563-108A5;0.638211
|name=PAX5_motifB:GM12878-PAX5-ChIP-Seq/Homer
|name=PAX5_motifB:GM12878-PAX5-ChIP-Seq/Homer
|tomtom_result=Pax2#MA0067.1;1;0.000145698;0.0693522;0.138669;7;GTCACGCTCCCTGA;AGTCACGG;+!usp#MA0016.1;3;0.00045733;0.217689;0.217634;7;GTCACGCTCCCTGA;GGGGTCACGG;+!hkb#MA0450.1;-1;0.00154768;0.736694;0.491005;9;GTCACGCTCCCTGA;TCACGCCCC;-!NFE2L1::MafG#MA0089.1;0;0.00345219;1.64324;0.734322;6;GTCACGCTCCCTGA;GTCATG;-!Pax5#MA0014.1;2;0.00385771;1.83627;0.734322;14;GTCACGCTCCCTGA;CCGCTACGCTTCAGTGCTCT;-!ABF1#MA0265.1;2;0.00590429;2.81044;0.799398;14;GTCACGCTCCCTGA;ATATCACTTTATACGA;-!ESR2#MA0258.1;4;0.00801178;3.81361;0.799398;14;GTCACGCTCCCTGA;CAAGGTCACGGTGACCTG;+!PPARG#MA0066.1;4;0.0095093;4.52643;0.799398;14;GTCACGCTCCCTGA;GTAGGTCACGGTGACCTACT;+!ESR1#MA0112.1;3;0.0103693;4.93576;0.799398;14;GTCACGCTCCCTGA;GGGGTCACGGTGACCTGG;-!MET31#MA0333.1;1;0.0110697;5.26919;0.799398;8;GTCACGCTCCCTGA;CGCCACACT;-!ARG81#MA0272.1;3;0.0120537;5.73757;0.799398;5;GTCACGCTCCCTGA;AGAGTCAC;-!CREB1#MA0018.1;3;0.0124223;5.91301;0.799398;9;GTCACGCTCCCTGA;GACGTCACCAGG;-!h#MA0449.1;0;0.0126281;6.01099;0.799398;10;GTCACGCTCCCTGA;GGCACGTGCC;+!NR4A2#MA0160.1;3;0.0127076;6.0488;0.799398;5;GTCACGCTCCCTGA;AAGGTCAC;+!Arnt::Ahr#MA0006.1;-2;0.0136402;6.49271;0.799398;6;GTCACGCTCCCTGA;CACGCA;-!GCN4#MA0303.1;10;0.0142786;6.7966;0.799398;11;GTCACGCTCCCTGA;CAAGGGATGAGTCATACTTCA;+
}}
}}

Latest revision as of 14:25, 7 September 2012

Full Name: PAX5_motifB:GM12878-PAX5-ChIP-Seq/Homer

Motif matrix
POACGT
1021934
25110183
3019504
4195031
53160234
639101500
70118810
830345130
9121073545
1025736932
1131955122
12176185
13171865
149076330

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pax2#MA0067.110.0001456980.06935220.1386697GTCACGCTCCCTGAAGTCACGG+
usp#MA0016.130.000457330.2176890.2176347GTCACGCTCCCTGAGGGGTCACGG+
hkb#MA0450.1-10.001547680.7366940.4910059GTCACGCTCCCTGATCACGCCCC-
NFE2L1::MafG#MA0089.100.003452191.643240.7343226GTCACGCTCCCTGAGTCATG-
Pax5#MA0014.120.003857711.836270.73432214GTCACGCTCCCTGACCGCTACGCTTCAGTGCTCT-
ABF1#MA0265.120.005904292.810440.79939814GTCACGCTCCCTGAATATCACTTTATACGA-
ESR2#MA0258.140.008011783.813610.79939814GTCACGCTCCCTGACAAGGTCACGGTGACCTG+
PPARG#MA0066.140.00950934.526430.79939814GTCACGCTCCCTGAGTAGGTCACGGTGACCTACT+
ESR1#MA0112.130.01036934.935760.79939814GTCACGCTCCCTGAGGGGTCACGGTGACCTGG-
MET31#MA0333.110.01106975.269190.7993988GTCACGCTCCCTGACGCCACACT-
ARG81#MA0272.130.01205375.737570.7993985GTCACGCTCCCTGAAGAGTCAC-
CREB1#MA0018.130.01242235.913010.7993989GTCACGCTCCCTGAGACGTCACCAGG-
h#MA0449.100.01262816.010990.79939810GTCACGCTCCCTGAGGCACGTGCC+
NR4A2#MA0160.130.01270766.04880.7993985GTCACGCTCCCTGAAAGGTCAC+
Arnt::Ahr#MA0006.1-20.01364026.492710.7993986GTCACGCTCCCTGACACGCA-
GCN4#MA0303.1100.01427866.79660.79939811GTCACGCTCCCTGACAAGGGATGAGTCATACTTCA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:PAX5_motifB:GM12878-PAX5-ChIP-Seq/Homer&oldid=2134353"