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MacroAPE 1083:Motif1026: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;164552!02;3689;128482;20817;11564!03;4537;158299;1716;0!04;0;0;0;164552!05;12341;11534;114867;25810!06;0;0;164552;0 |macroape_1083_s...")
 
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6;0.853893!10809-111A8;0.764249!10597-108E3;0.229486!10717-109I6;0.00085169!10455-106G5;0.243186!10534-107G3;0.103502!10429-106D6;0.0338441!10464-106H5;0.00432864!10827-111C8;0.0600554!10789-110H6;0.631432!10828-111C9;0.752123!10788-110H5;0.539804!10792-110H9;0.292116!10765-110E9;0.781249!10829-111D1;0.256468!10830-111D2;0.457806!10831-111D3;0.446401!10832-111D4;0.901013!10833-111D5;0.153827!10764-110E8;0.268456!10770-110F5;0.202714!10399-106A3;0.343706!10400-106A4;0.204862!10405-106A9;0.212725!10834-111D6;0.151284!10835-111D7;0.435689!10836-111D8;0.168092!10837-111D9;0.0700327!10699-109G6;0.464408!10802-111A1;0.480863!10796-110I4;0.277898!10010-101C1;0.588311!10810-111A9;0.143102!10421-106C7;0.0556861!10708-109H6;0.339382!12235-129G3;0.352421!12236-129G4;0.0686621!12237-129G5;0.726974!10167-103B5;0.156308!10151-102I7;0.510967!10428-106D5;0.602377!10795-110I3;0.39367!10805-111A4;0.399756!10052-101G7;0.00379348!10189-103D9;0.0631939!10589-108D4;0.425021!10425-106D2;0.00529527!10427-106D4;0.0208551!10702-109G9;0.0974987!10432-106D9;0.0324914!10496-107C1;0.50843!10718-109I7;0.78045!10011-101C2;0.338622!10053-101G8;0.191726!10686-109F2;0.510709!10084-102B3;0.299795!10012-101C3;0.842046!10085-102B4;0.655712!10482-107A5;0.338052!10419-106C5;0.0535631!10080-102A8;0.0892277!10760-110E4;0.0787124!10709-109H7;0.876667!10710-109H8;0.871978!10703-109H1;0.756622!10719-109I8;0.000918907!10642-109A3;7.47734e-06!10177-103C6;0.000297156!10164-103B2;0.510997!10173-103C2;0.56565!10166-103B4;0.241627!10083-102B2;0.360843!10188-103D8;0.440593!10552-107I3;0.726138!10553-107I4;0.510434!10013-101C4;0.206416!10536-107G5;0.085976!10618-108G6;0.575869!10423-106C9;0.575385!10785-110H2;0.294391!12238-129G6;0.571337!12239-129G7;0.00994702!12240-129G8;0.0098727!10416-106C2;0.000754256!10801-110I9;0.183418!10766-110F1;0.783637!10824-111C5;0.525138!10825-111C6;0.742345!10826-111C7;0.788815!10454-106G4;0.741388!10409-106B4;0.589816!10638-108I8;0.203101!10636-108I6;0.736615!10513-107D9;0.752837!10420-106C6;0.432791!10082-102B1;0.00432227!10014-101C5;0.0952134!10070-101I7;0.186184!10452-106G2;0.13185!10453-106G3;0.000250325!10449-106F8;0.000442961!10042-101F6;0.000711798!10069-101I6;0.93852!10193-103E4;0.0960812!10631-108I1;0.578472!10438-106E6;0.0438955!10488-107B2;0.358121!10196-103E7;0.530522!10071-101I8;0.0737888!10071-101I8;0.0864482!10041-101F5;0.171577!10451-106G1;0.131161!10450-106F9;0.00462431!10604-108F1;0.00556265!10605-108F2;0.312216!10606-108F3;0.670986!10603-108E9;0.172933!10497-107C2;0.46347!10448-106F7;0.838044!10643-109A4;0.425456!10426-106D3;0.194944!10431-106D8;0.843154!10197-103E8;0.799049!10443-106F2;0.059897!10815-111B5;0.402171!10816-111B6;0.452921!10817-111B7;0.358583!10015-101C6;0.485922!10410-106B5;0.104382!10054-101G9;0.00835866!10758-110E2;0.273533!10711-109H9;0.995928!10040-101F4;0.588522!10470-106I2;0.481747!10415-106C1;0.285101!10198-103E9;0.342613!10614-108G2;0.065797!10612-108F9;0.686427!10549-107H9;0.444816!10615-108G3;0.0151346!10487-107B1;0.0335934!10433-106E1;0.611337!10688-109F4;0.775061!10444-106F3;0.734189!10444-106F3;0.222349!10485-107A8;0.23784!10413-106B8;0.197596!10175-103C4;0.0973313!10161-103A8;0.641205!12131-128D7;0.832373!10624-108H3;0.0483354!10712-109I1;0.676278!10205-103F7;0.0346797!10206-103F8;0.137324!10207-103F9;0.19006!10050-101G5;0.0706718!10051-101G6;0.0531783!10016-101C7;0.0512433!10046-101G1;0.124981!10778-110G4;0.387626!10633-108I3;0.236388!10818-111B8;0.0247461!10819-111B9;0.661701!10820-111C1;0.71088!10484-107A7;0.660343!10808-111A7;0.327325!10169-103B7;0.172176!10153-102I9;0.584952!13425-144D5;0.72096!13433-144E4;0.0442502!13437-144E8;0.061509!11904-125F5;0.0570603!11905-125F6;0.255056!10039-101F3;0.195824!10791-110H8;0.520016!10017-101C8;0.832402!10045-101F9;0.0215082!10509-107D5;0.319213!10839-111E2;0.379486!10692-109F8;0.59586!10079-102A7;0.243809!10078-102A6;0.0605401!10721-110A1;0.0378529!10569-108B2;0.299793!10570-108B3;0.0798934!10571-108B4;0.00974052!10647-109A8;0.219786!10752-110D5;0.0593442!10782-110G8;0.344485!10726-110A6;0.91448!10018-101C9;0.84809!10086-102B5;0.0149157!10182-103D2;0.030335!10165-103B3;0.687995!10499-107C4;0.777085!10408-106B3;0.645683!10019-101D1;0.77371!10068-101I5;0.107927!10075-102A3;0.205152!10077-102A5;0.0418392!10727-110A7;0.0972158!10775-110G1;0.0961362!10412-106B7;0.0567699!12231-129F8;0.0566554!12232-129F9;0.569191!12233-129G1;0.273949!12234-129G2;0.358183!10414-106B9;0.956595!10170-103B8;0.0113855!10183-103D3;0.378231!10150-102I6;0.50856!10174-103C3;0.612252!10155-103A2;0.777369!10038-101F2;0.924961!10838-111E1;0.912134!10759-110E3;0.000157919!10514-107E1;0.14685!10465-106H6;0.173185!10691-109F7;0.0140094!10843-111E6;0.0561561!10844-111E7;0.000518303!11747-123G1;0.000758842!11748-123G2;0.501499!11749-123G3;0.210103!11750-123G4;0.510231!11751-123G5;0.398946!11840-124H4;0.0355761!11752-123G6;0.0429452!11753-123G7;0.241332!11754-123G8;0.170981!11755-123G9;0.835988!11756-123H1;0.862948!11833-124G6;0.760531!11760-123H5;0.239282!11836-124G9;0.898935!11758-123H3;0.40675!11835-124G8;0.0746816!11762-123H7;0.0675941!11838-124H2;0.000679802!11757-123H2;0.0558343!11759-123H4;0.3979!11761-123H6;0.527807!11842-124H6;0.16252!11837-124H1;0.472227!10568-108B1;0.0229522!13230-141I8;0.630422!13231-141I9;0.08301!10696-109G3;0.0953193!10493-107B7;0.713009!10494-107B8;0.580136!10850-111F4;0.713847!10851-111F5;0.407588!10852-111F6;0.490569!10853-111F7;0.737705!10854-111F8;0.756544!10855-111F9;0.474492!10856-111G1;0.0737654!10847-111F1;0.220576!10846-111E9;0.489558!10848-111F2;0.581763!10845-111E8;0.637189!10857-111G2;0.234726!10858-111G3;0.638645!10156-103A3;0.800012!11901-125F2;0.609373!11902-125F3;0.187286!11903-125F4;0.267526!10689-109F5;0.301435!10648-109A9;0.765911!10784-110H1;0.599251!10744-110C6;0.881337!10772-110F7;0.0577737!10474-106I6;0.139098!10600-108E6;0.419372!10684-109E9;0.42801!12226-129F3;0.225122!12227-129F4;0.701029!10508-107D4;0.875959!10539-107G8;9.49809e-07!10607-108F4;0.000199028!10555-107I6;0.00250445!10774-110F9;8.81615e-09!10637-108I7;0.0369277!10663-109C6;1.61336e-05!10728-110A8;0.000527675!10729-110A9;3.62142e-05!10430-106D7;0.103099!10730-110B1;0.00334891!10813-111B3;0.0017371!10812-111B2;0.663528!10037-101F1;0.510272!10172-103C1;0.549644!10163-103B1;0.41392!10076-102A4;0.640318!10073-102A1;0.557257!10036-101E9;0.112599!10195-103E6;0.620101!10277-104E7;0.629644!10434-106E2;0.916755!10550-107I1;0.136976!10545-107H5;0.0856661!10544-107H4;0.919258!10704-109H2;0.986148!10510-107D6;0.0127993!10558-107I9;0.0354701!10020-101D2;0.00532611!10732-110B3;0.213068!10049-101G4;0.624137!10698-109G5;0.00133038!10437-106E5;0.469675!10417-106C3;0.638262!10035-101E8;0.695906!10171-103B9;0.553129!10157-103A4;0.470532!10034-101E7;0.587652!10072-101I9;0.572351!10199-103F1;0.0856023!10200-103F2;0.00282332!10697-109G4;0.0840539!10723-110A3;5.09836e-05!10179-103C8;0.194114!10160-103A7;0.772523!10180-103C9;0.744286!10162-103A9;0.7187!10021-101D3;0.617228!10840-111E3;0.0274119!10706-109H4;0.0403396!10033-101E6;0.781852!10032-101E5;0.759113!10490-107B4;0.604185!10439-106E7;0.577971!10022-101D4;0.310568!10176-103C5;0.162357!10469-106I1;0.472237!10067-101I4;0.249788!10411-106B6;0.587859!10471-106I3;0.286117!10030-101E3;0.897877!10475-106I7;0.549346!10787-110H4;0.000346767!10477-106I9;0.0496723!10695-109G2;5.72259e-05!11771-123I7;0.598146!11772-123I8;0.215208!11773-123I9;0.340406!10093-102C3;0.848585!10442-106F1;0.00370191!10442-106F1;0.379554!10201-103F3;0.31111!10639-108I9;0.0512286!11843-124H7;0.637979!11841-124H5;0.621532!10693-109F9;0.831571!10436-106E4;0.63837!10483-107A6;0.904764!10282-104F3;0.833469!10023-101D5;0.160305!10066-101I3;0.196902!10065-101I2;0.0861756!10800-110I8;0.161144!10610-108F7;0.0144338!10841-111E4;0.000795556!10541-107H1;0.00130897!10842-111E5;2.53059e-05!10562-108A4;8.33509e-05!10024-101D6;0.0195686!10064-101I1;0.135646!10609-108F6;0.128555!10048-101G3;0.0946119!10781-110G7;0.245356!10181-103D1;0.006581!10159-103A6;0.963031!10056-101H2;0.890774!10737-110B8;0.816289!10025-101D7;0.171846!10044-101F8;0.257445!10424-106D1;0.143316!10463-106H4;0.131661!10616-108G4;0.932012!10486-107A9;0.90393!10062-101H8;0.731107!10202-103F4;0.126106!10158-103A5;0.00798881!10441-106E9;0.867059!10031-101E4;0.00159119!10063-101H9;0.685634!10063-101H9;0.129767!11763-123H8;0.147023!11765-123I1;0.0147572!11768-123I4;0.00108197!10807-111A6;0.0019975!10790-110H7;0.0257094!10798-110I6;0.00375919!10786-110H3;0.168342!10591-108D6;0.0291018!10593-108D8;0.00598348!10590-108D5;0.0139723!10026-101D8;0.0185402!10096-102C6;0.549926!10168-103B6;0.402109!10154-103A1;0.63806!10209-103G2;0.707712!10061-101H7;0.037748!10027-101D9;0.115509!10043-101F7;0.187582!10783-110G9;0.855992!10028-101E1;0.798206!10060-101H6;0.0137119!10203-103F5;0.0649146!10059-101H5;0.0275702!10047-101G2;0.0326609!10029-101E2;0.0483455!10058-101H4;0.025699!10418-106C4;0.0630654!10492-107B6;0.0470819!10694-109G1;0.299048!10797-110I5;0.131783!10057-101H3;0.8009!10100-102D1;0.03498!10055-101H1;0.123256!10204-103F6;0.233547!10191-103E2;0.217443!10563-108A5;0.118161
|name=motif1026
|name=motif1026
|tomtom_result=Stat3#MA0144.1;2;0.000246704;0.117431;0.234862;6;TCCTGG;CTTCCTGGAA;-!STAT1#MA0137.2;4;0.00330065;1.57111;0.88718;6;TCCTGG;CATTTCCCGGAAACC;+!ACE2#MA0267.1;0;0.00559557;2.66349;0.88718;6;TCCTGG;TGCTGGT;-!SWI5#MA0402.1;0;0.00581181;2.76642;0.88718;6;TCCTGG;TGCTGGTT;+!FEV#MA0156.1;3;0.00609996;2.90358;0.88718;5;TCCTGG;ATTTCCTG;-!PUT3#MA0358.1;1;0.0144662;6.8859;1;6;TCCTGG;TTCCCGGG;-!ttk#MA0460.1;4;0.0160737;7.65107;1;5;TCCTGG;ATTATCCTT;-
}}
}}

Latest revision as of 14:27, 7 September 2012

Full Name: motif1026

Motif matrix
POACGT
01000164552
0236891284822081711564
03453715829917160
04000164552
05123411153411486725810
06001645520

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Stat3#MA0144.120.0002467040.1174310.2348626TCCTGGCTTCCTGGAA-
STAT1#MA0137.240.003300651.571110.887186TCCTGGCATTTCCCGGAAACC+
ACE2#MA0267.100.005595572.663490.887186TCCTGGTGCTGGT-
SWI5#MA0402.100.005811812.766420.887186TCCTGGTGCTGGTT+
FEV#MA0156.130.006099962.903580.887185TCCTGGATTTCCTG-
PUT3#MA0358.110.01446626.885916TCCTGGTTCCCGGG-
ttk#MA0460.140.01607377.6510715TCCTGGATTATCCTT-
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