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MacroAPE 1083:Motif189: Difference between revisions

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6;0.58822!10828-111C9;0.678813!10788-110H5;0.270854!10792-110H9;0.648588!10765-110E9;0.791698!10829-111D1;0.874062!10830-111D2;0.613092!10831-111D3;0.894438!10832-111D4;0.448885!10833-111D5;0.683542!10764-110E8;0.524359!10770-110F5;0.46382!10399-106A3;0.969028!10400-106A4;0.709418!10405-106A9;0.57412!10834-111D6;0.779966!10835-111D7;0.834904!10836-111D8;0.370118!10837-111D9;0.334693!10699-109G6;0.599335!10802-111A1;0.775298!10796-110I4;0.481!10010-101C1;0.173201!10810-111A9;0.217904!10421-106C7;0.132915!10708-109H6;0.378171!12235-129G3;0.372613!12236-129G4;0.842909!12237-129G5;0.985402!10167-103B5;0.976748!10151-102I7;0.19287!10428-106D5;0.1886!10795-110I3;0.26798!10805-111A4;0.48011!10052-101G7;0.276981!10189-103D9;0.363602!10589-108D4;0.21616!10425-106D2;0.0867987!10427-106D4;0.380474!10702-109G9;0.107474!10432-106D9;0.376084!10496-107C1;0.163759!10718-109I7;0.199629!10011-101C2;0.85265!10053-101G8;0.413837!10686-109F2;0.499246!10084-102B3;0.281708!10012-101C3;0.109665!10085-102B4;0.100117!10482-107A5;0.268008!10419-106C5;0.649539!10080-102A8;0.60389!10760-110E4;0.668462!10709-109H7;0.0755944!10710-109H8;0.0969266!10703-109H1;0.417191!10719-109I8;0.73729!10642-109A3;0.391436!10177-103C6;0.360211!10164-103B2;0.124!10173-103C2;0.221698!10166-103B4;0.322266!10083-102B2;0.34399!10188-103D8;0.289259!10552-107I3;0.120866!10553-107I4;0.695083!10013-101C4;0.367481!10536-107G5;0.253056!10618-108G6;0.00616645!10423-106C9;0.205188!10785-110H2;0.344288!12238-129G6;0.213764!12239-129G7;0.910022!12240-129G8;0.769717!10416-106C2;0.751906!10801-110I9;0.990658!10766-110F1;0.712424!10824-111C5;0.698527!10825-111C6;0.138495!10826-111C7;0.143064!10454-106G4;0.113263!10409-106B4;0.318852!10638-108I8;0.370625!10636-108I6;0.0521355!10513-107D9;0.177103!10420-106C6;0.0365384!10082-102B1;0.180149!10014-101C5;0.69813!10070-101I7;0.468651!10452-106G2;0.646852!10453-106G3;0.141319!10449-106F8;0.105529!10042-101F6;0.0885312!10069-101I6;0.0737288!10193-103E4;0.235439!10631-108I1;0.130946!10438-106E6;0.429063!10488-107B2;0.348064!10196-103E7;0.123375!10071-101I8;0.140224!10071-101I8;0.191917!10041-101F5;0.280392!10451-106G1;0.0850214!10450-106F9;0.248738!10604-108F1;0.155009!10605-108F2;0.295321!10606-108F3;0.365987!10603-108E9;0.305894!10497-107C2;0.214284!10448-106F7;0.0934789!10643-109A4;0.135651!10426-106D3;0.336185!10431-106D8;0.301441!10197-103E8;0.308951!10443-106F2;0.156421!10815-111B5;0.167079!10816-111B6;0.531611!10817-111B7;0.686732!10015-101C6;0.56542!10410-106B5;0.413855!10054-101G9;0.583497!10758-110E2;0.206205!10711-109H9;0.428024!10040-101F4;0.190827!10470-106I2;0.139034!10415-106C1;0.284713!10198-103E9;0.315823!10614-108G2;0.0866149!10612-108F9;0.334538!10549-107H9;0.149714!10615-108G3;0.126843!10487-107B1;0.422701!10433-106E1;0.442395!10688-109F4;0.110627!10444-106F3;0.727591!10444-106F3;0.5507!10485-107A8;0.354001!10413-106B8;0.596184!10175-103C4;0.20842!10161-103A8;0.0950449!12131-128D7;0.0889952!10624-108H3;0.936637!10712-109I1;0.964462!10205-103F7;0.161931!10206-103F8;0.102548!10207-103F9;0.106297!10050-101G5;0.35848!10051-101G6;0.253482!10016-101C7;0.0342895!10046-101G1;0.0768536!10778-110G4;0.198451!10633-108I3;0.394226!10818-111B8;0.0286793!10819-111B9;0.050571!10820-111C1;0.0679751!10484-107A7;0.0602372!10808-111A7;0.3139!10169-103B7;0.107033!10153-102I9;0.190866!13425-144D5;0.174472!13433-144E4;0.0835707!13437-144E8;0.0341957!11904-125F5;0.0198781!11905-125F6;0.649586!10039-101F3;0.59109!10791-110H8;0.155317!10017-101C8;0.138662!10045-101F9;0.573089!10509-107D5;0.574911!10839-111E2;0.119861!10692-109F8;0.555886!10079-102A7;0.485298!10078-102A6;0.118018!10721-110A1;0.0797982!10569-108B2;0.17757!10570-108B3;0.540299!10571-108B4;0.0956336!10647-109A8;0.649896!10752-110D5;0.963304!10782-110G8;0.768534!10726-110A6;0.879293!10018-101C9;0.486601!10086-102B5;0.984237!10182-103D2;0.854578!10165-103B3;0.0981783!10499-107C4;0.104004!10408-106B3;0.214107!10019-101D1;0.140346!10068-101I5;0.439004!10075-102A3;0.693281!10077-102A5;0.353351!10727-110A7;0.151139!10775-110G1;0.557778!10412-106B7;0.296079!12231-129F8;0.412625!12232-129F9;0.249138!12233-129G1;0.106418!12234-129G2;0.233166!10414-106B9;0.628311!10170-103B8;0.38245!10183-103D3;0.11079!10150-102I6;0.147256!10174-103C3;0.154935!10155-103A2;0.116119!10038-101F2;0.0893517!10838-111E1;0.0806125!10759-110E3;0.314404!10514-107E1;0.113577!10465-106H6;0.0970433!10691-109F7;0.157732!10843-111E6;0.0363907!10844-111E7;0.743581!11747-123G1;0.889805!11748-123G2;0.363381!11749-123G3;0.528297!11750-123G4;0.580871!11751-123G5;0.201402!11840-124H4;0.354691!11752-123G6;0.313813!11753-123G7;0.771636!11754-123G8;0.77275!11755-123G9;0.964041!11756-123H1;0.969999!11833-124G6;0.79646!11760-123H5;0.247421!11836-124G9;0.906024!11758-123H3;0.584721!11835-124G8;0.899071!11762-123H7;0.19101!11838-124H2;0.711295!11757-123H2;0.384376!11759-123H4;0.556676!11761-123H6;0.449893!11842-124H6;0.732103!11837-124H1;0.723981!10568-108B1;0.477185!13230-141I8;0.463735!13231-141I9;0.346053!10696-109G3;0.236651!10493-107B7;0.448481!10494-107B8;0.0345384!10850-111F4;0.165742!10851-111F5;0.0374585!10852-111F6;0.856344!10853-111F7;0.572758!10854-111F8;0.153042!10855-111F9;0.345197!10856-111G1;0.865718!10847-111F1;0.418538!10846-111E9;0.114675!10848-111F2;0.252302!10845-111E8;0.0487601!10857-111G2;0.0501087!10858-111G3;0.775904!10156-103A3;0.264844!11901-125F2;0.166202!11902-125F3;0.34219!11903-125F4;0.237363!10689-109F5;0.311371!10648-109A9;0.116536!10784-110H1;0.00872179!10744-110C6;0.164687!10772-110F7;0.20432!10474-106I6;0.559257!10600-108E6;0.349353!10684-109E9;0.872483!12226-129F3;0.859565!12227-129F4;0.336129!10508-107D4;0.468769!10539-107G8;0.966561!10607-108F4;0.977441!10555-107I6;0.192555!10774-110F9;0.751446!10637-108I7;0.164089!10663-109C6;0.433453!10728-110A8;0.302461!10729-110A9;0.461289!10430-106D7;0.777484!10730-110B1;0.390908!10813-111B3;0.686154!10812-111B2;0.761645!10037-101F1;0.373186!10172-103C1;0.15808!10163-103B1;0.12897!10076-102A4;0.122473!10073-102A1;0.138897!10036-101E9;0.267751!10195-103E6;0.164554!10277-104E7;0.183688!10434-106E2;0.0787213!10550-107I1;0.532776!10545-107H5;0.0876501!10544-107H4;0.454942!10704-109H2;0.243372!10510-107D6;0.344992!10558-107I9;0.309073!10020-101D2;0.668281!10732-110B3;0.140883!10049-101G4;0.38732!10698-109G5;0.923749!10437-106E5;0.413278!10417-106C3;0.187431!10035-101E8;0.302163!10171-103B9;0.131839!10157-103A4;0.117762!10034-101E7;0.171609!10072-101I9;0.13814!10199-103F1;0.311895!10200-103F2;0.293996!10697-109G4;0.149!10723-110A3;0.16025!10179-103C8;0.175532!10160-103A7;0.567921!10180-103C9;0.411953!10162-103A9;0.473893!10021-101D3;0.209448!10840-111E3;0.452194!10706-109H4;0.202927!10033-101E6;0.831119!10032-101E5;0.0834517!10490-107B4;0.142912!10439-106E7;0.0424711!10022-101D4;0.0448126!10176-103C5;0.144678!10469-106I1;0.239962!10067-101I4;0.126044!10411-106B6;0.362446!10471-106I3;0.498689!10030-101E3;0.0101459!10475-106I7;0.109653!10787-110H4;0.284066!10477-106I9;0.305625!10695-109G2;0.213202!11771-123I7;0.302287!11772-123I8;0.0688559!11773-123I9;0.693024!10093-102C3;0.974819!10442-106F1;0.324913!10442-106F1;0.0345188!10201-103F3;0.078631!10639-108I9;0.167035!11843-124H7;0.546205!11841-124H5;0.0696178!10693-109F9;0.132695!10436-106E4;0.129597!10483-107A6;0.181795!10282-104F3;0.384814!10023-101D5;0.137839!10066-101I3;0.183034!10065-101I2;0.36208!10800-110I8;0.264786!10610-108F7;0.199496!10841-111E4;0.416219!10541-107H1;0.370513!10842-111E5;0.224419!10562-108A4;0.144466!10024-101D6;0.412461!10064-101I1;0.49521!10609-108F6;0.600264!10048-101G3;0.112024!10781-110G7;0.302613!10181-103D1;0.168221!10159-103A6;0.117577!10056-101H2;0.105904!10737-110B8;0.101138!10025-101D7;0.427334!10044-101F8;0.173737!10424-106D1;0.252432!10463-106H4;0.14173!10616-108G4;0.191276!10486-107A9;0.378726!10062-101H8;0.148071!10202-103F4;0.467325!10158-103A5;0.191163!10441-106E9;0.0859027!10031-101E4;0.166141!10063-101H9;0.162736!10063-101H9;0.334739!11763-123H8;0.159762!11765-123I1;0.631961!11768-123I4;0.473896!10807-111A6;0.265069!10790-110H7;0.417281!10798-110I6;0.220267!10786-110H3;0.220531!10591-108D6;0.331968!10593-108D8;0.359661!10590-108D5;0.97848!10026-101D8;0.0114894!10096-102C6;0.0395037!10168-103B6;0.344931!10154-103A1;0.101233!10209-103G2;0.0959686!10061-101H7;0.187652!10027-101D9;0.382419!10043-101F7;0.799283!10783-110G9;0.319055!10028-101E1;0.299499!10060-101H6;0.951322!10203-103F5;0.710145!10059-101H5;0.241923!10047-101G2;0.24927!10029-101E2;0.483438!10058-101H4;0.401751!10418-106C4;0.469629!10492-107B6;0.479799!10694-109G1;0.14595!10797-110I5;0.703264!10057-101H3;0.0511333!10100-102D1;0.495723!10055-101H1;0.212358!10204-103F6;0.277187!10191-103E2;0.756437!10563-108A5;0.0900246
|name=motif189
|name=motif189
|tomtom_result=RREB1#MA0073.1;3;0.00605071;2.88014;1;9;GGGAGGCTG;TGGGGGGGGGTGGTTTGGGG;-!SP1#MA0079.2;-1;0.00715099;3.40387;1;8;GGGAGGCTG;GGGGGCGGGG;-!CRZ1#MA0285.1;-2;0.00774121;3.68481;1;7;GGGAGGCTG;GTGGCTTAG;-!SP1#MA0079.2;2;0.0080005;3.80824;1;8;GGGAGGCTG;GGGGCGGGGT;+!btd#MA0443.1;0;0.00861599;4.10121;1;9;GGGAGGCTG;AGGGGGCGGA;+!TLX1::NFIC#MA0119.1;2;0.00962782;4.58284;1;9;GGGAGGCTG;TTGGCATGGTGCCA;-!UME6#MA0412.1;1;0.0123964;5.90068;1;9;GGGAGGCTG;TCGGCGGCTAATT;+!Macho-1#MA0118.1;1;0.0142638;6.78956;1;8;GGGAGGCTG;TGGGGGGTC;+!HAP4#MA0315.1;0;0.0145129;6.90815;1;9;GGGAGGCTG;TCGCCTCTGATTGGT;-!Pax4#MA0068.1;3;0.0151534;7.213;1;9;GGGAGGCTG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-
}}
}}

Latest revision as of 14:36, 7 September 2012

Full Name: motif189

Motif matrix
POACGT
0100727630
0200727630
0357608900550463057
0427693135121699414564
0503814640464903
0629715525614332834
0734845866481062509
0800072763
0910773594657912301

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RREB1#MA0073.130.006050712.8801419GGGAGGCTGTGGGGGGGGGTGGTTTGGGG-
SP1#MA0079.2-10.007150993.4038718GGGAGGCTGGGGGGCGGGG-
CRZ1#MA0285.1-20.007741213.6848117GGGAGGCTGGTGGCTTAG-
SP1#MA0079.220.00800053.8082418GGGAGGCTGGGGGCGGGGT+
btd#MA0443.100.008615994.1012119GGGAGGCTGAGGGGGCGGA+
TLX1::NFIC#MA0119.120.009627824.5828419GGGAGGCTGTTGGCATGGTGCCA-
UME6#MA0412.110.01239645.9006819GGGAGGCTGTCGGCGGCTAATT+
Macho-1#MA0118.110.01426386.7895618GGGAGGCTGTGGGGGGTC+
HAP4#MA0315.100.01451296.9081519GGGAGGCTGTCGCCTCTGATTGGT-
Pax4#MA0068.130.01515347.21319GGGAGGCTGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif189&oldid=2134422"