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MacroAPE 1083:CNhs11377 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;72.7838985926779;361.4874017174914;53.1999557563397;68.54535493103299!2;88.74141648899803;236.04615008445955;44.35654284144232;186.872501582...")
 
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I7;0.209584!12177-128I8;0.0831608!12182-129A4;0.140319!12183-129A5;0.217089!12184-129A6;0.258062!10809-111A8;0.152776!10597-108E3;0.094916!10717-109I6;0.501988!10455-106G5;0.158945!10534-107G3;1.79825e-05!10429-106D6;3.34194e-05!10464-106H5;0.00114003!10827-111C8;8.53924e-06!10789-110H6;0.000377557!10828-111C9;0.0026557!10788-110H5;0.00497912!10792-110H9;0.00763333!10765-110E9;0.00172252!10829-111D1;0.000208985!10830-111D2;0.000880629!10831-111D3;0.000253902!10832-111D4;0.00053534!10833-111D5;6.64816e-05!10764-110E8;0.000557581!10770-110F5;0.000539038!10399-106A3;0.00117761!10400-106A4;0.0023021!10405-106A9;0.00189932!10834-111D6;0.00171638!10835-111D7;0.000270851!10836-111D8;0.016933!10837-111D9;0.0469978!10699-109G6;0.00175474!10802-111A1;0.00352109!10796-110I4;0.00042419!10010-101C1;0.308123!10810-111A9;0.00547606!10421-106C7;0.0130182!10708-109H6;0.000652775!12235-129G3;0.441863!12236-129G4;0.727576!12237-129G5;0.0561884!10167-103B5;0.906125!10151-102I7;0.0182837!10428-106D5;0.00439057!10795-110I3;0.808299!10805-111A4;0.000105259!10052-101G7;0.580439!10189-103D9;0.0012379!10589-108D4;0.0224702!10425-106D2;0.516995!10427-106D4;0.485016!10702-109G9;2.57312e-06!10432-106D9;0.114793!10496-107C1;0.568598!10718-109I7;0.417217!10011-101C2;0.000157479!10053-101G8;0.000169211!10686-109F2;0.103993!10084-102B3;0.235212!10012-101C3;0.00588978!10085-102B4;0.00893534!10482-107A5;0.0463107!10419-106C5;0.705231!10080-102A8;0.64207!10760-110E4;0.00254105!10709-109H7;0.376633!10710-109H8;0.679639!10703-109H1;0.161841!10719-109I8;0.356604!10642-109A3;0.43182!10177-103C6;0.843432!10164-103B2;0.0116033!10173-103C2;0.00629287!10166-103B4;0.067972!10083-102B2;0.0275451!10188-103D8;0.0311116!10552-107I3;0.00578977!10553-107I4;0.00519246!10013-101C4;0.863665!10536-107G5;0.000300014!10618-108G6;0.937535!10423-106C9;0.194149!10785-110H2;0.0431706!12238-129G6;0.296918!12239-129G7;0.368112!12240-129G8;0.267053!10416-106C2;0.274114!10801-110I9;0.000549774!10766-110F1;0.00133156!10824-111C5;0.000369925!10825-111C6;0.00748519!10826-111C7;0.0122474!10454-106G4;0.0130529!10409-106B4;0.0282495!10638-108I8;0.000707352!10636-108I6;0.0535715!10513-107D9;0.035048!10420-106C6;0.153369!10082-102B1;0.00853339!10014-101C5;0.0247698!10070-101I7;0.00308306!10452-106G2;0.0026238!10453-106G3;1.68987e-05!10449-106F8;1.69762e-05!10042-101F6;5.5492e-05!10069-101I6;0.00219693!10193-103E4;0.000166141!10631-108I1;0.007457!10438-106E6;8.72411e-05!10488-107B2;0.147836!10196-103E7;0.0376335!10071-101I8;0.00126633!10071-101I8;6.0248e-05!10041-101F5;0.0582779!10451-106G1;0.000375509!10450-106F9;0.00149362!10604-108F1;0.0186113!10605-108F2;0.439834!10606-108F3;0.842289!10603-108E9;0.449802!10497-107C2;0.616139!10448-106F7;0.301019!10643-109A4;0.388142!10426-106D3;0.0888437!10431-106D8;0.529114!10197-103E8;0.282827!10443-106F2;9.91034e-05!10815-111B5;0.633729!10816-111B6;0.00833363!10817-111B7;0.00903759!10015-101C6;0.00820691!10410-106B5;0.00120173!10054-101G9;0.124105!10758-110E2;0.000288421!10711-109H9;0.541113!10040-101F4;0.0320681!10470-106I2;0.0104804!10415-106C1;0.30625!10198-103E9;0.754754!10614-108G2;1.11256e-05!10612-108F9;0.597196!10549-107H9;0.443331!10615-108G3;0.018341!10487-107B1;0.415869!10433-106E1;0.016587!10688-109F4;0.105354!10444-106F3;0.584099!10444-106F3;0.880212!10485-107A8;0.924348!10413-106B8;0.770515!10175-103C4;0.136961!10161-103A8;0.0102252!12131-128D7;0.00197579!10624-108H3;0.188796!10712-109I1;0.081952!10205-103F7;2.65539e-05!10206-103F8;0.00250197!10207-103F9;0.000760391!10050-101G5;0.0210063!10051-101G6;0.0182994!10016-101C7;0.00167377!10046-101G1;0.0369803!10778-110G4;0.00381426!10633-108I3;0.0703376!10818-111B8;0.440937!10819-111B9;0.141876!10820-111C1;0.122977!10484-107A7;0.17061!10808-111A7;0.960592!10169-103B7;0.000209309!10153-102I9;0.0117039!13425-144D5;0.00390208!13433-144E4;0.0415178!13437-144E8;0.0489941!11904-125F5;0.0224606!11905-125F6;0.0429619!10039-101F3;0.11592!10791-110H8;0.00694628!10017-101C8;0.192207!10045-101F9;0.000442411!10509-107D5;0.00133405!10839-111E2;0.318807!10692-109F8;0.0477758!10079-102A7;0.0840052!10078-102A6;0.000780023!10721-110A1;0.0446889!10569-108B2;0.0356491!10570-108B3;0.153852!10571-108B4;0.535488!10647-109A8;0.532366!10752-110D5;0.676881!10782-110G8;3.287e-05!10726-110A6;0.251938!10018-101C9;0.373267!10086-102B5;0.885235!10182-103D2;0.570323!10165-103B3;0.00459607!10499-107C4;0.00284818!10408-106B3;0.203174!10019-101D1;0.520528!10068-101I5;0.0370651!10075-102A3;0.00106328!10077-102A5;0.0107982!10727-110A7;0.602468!10775-110G1;1.43206e-05!10412-106B7;5.41284e-05!12231-129F8;0.457423!12232-129F9;0.0714782!12233-129G1;0.0311748!12234-129G2;0.194363!10414-106B9;0.318443!10170-103B8;0.295343!10183-103D3;0.020858!10150-102I6;0.0139734!10174-103C3;0.00510052!10155-103A2;0.00166551!10038-101F2;0.00139918!10838-111E1;0.000948425!10759-110E3;0.776413!10514-107E1;0.69542!10465-106H6;0.000166253!10691-109F7;0.000261736!10843-111E6;0.746211!10844-111E7;0.530182!11747-123G1;0.950247!11748-123G2;0.275041!11749-123G3;0.607681!11750-123G4;0.377291!11751-123G5;0.0872296!11840-124H4;0.104393!11752-123G6;0.292462!11753-123G7;0.88911!11754-123G8;0.337103!11755-123G9;0.913173!11756-123H1;0.637554!11833-124G6;0.952801!11760-123H5;0.884378!11836-124G9;0.89159!11758-123H3;0.794517!11835-124G8;0.589612!11762-123H7;0.237667!11838-124H2;0.215341!11757-123H2;0.419953!11759-123H4;0.491589!11761-123H6;0.642552!11842-124H6;0.402176!11837-124H1;0.315217!10568-108B1;0.174853!13230-141I8;0.660295!13231-141I9;0.968721!10696-109G3;0.889177!10493-107B7;0.00103358!10494-107B8;0.0180717!10850-111F4;0.460646!10851-111F5;0.346884!10852-111F6;0.829191!10853-111F7;0.290198!10854-111F8;0.0127271!10855-111F9;0.473912!10856-111G1;0.184006!10847-111F1;0.221093!10846-111E9;0.805029!10848-111F2;0.434389!10845-111E8;0.424184!10857-111G2;0.750722!10858-111G3;0.278827!10156-103A3;0.0506475!11901-125F2;0.00450991!11902-125F3;0.00020187!11903-125F4;0.0014747!10689-109F5;0.00152963!10648-109A9;0.00397571!10784-110H1;0.181151!10744-110C6;0.393413!10772-110F7;0.000367161!10474-106I6;8.11061e-05!10600-108E6;0.000244551!10684-109E9;0.890637!12226-129F3;0.953354!12227-129F4;0.231183!10508-107D4;0.00171351!10539-107G8;0.958076!10607-108F4;0.808606!10555-107I6;0.338794!10774-110F9;0.485918!10637-108I7;0.103505!10663-109C6;0.90393!10728-110A8;0.850987!10729-110A9;0.163148!10430-106D7;0.105426!10730-110B1;6.94918e-08!10813-111B3;0.256835!10812-111B2;0.383778!10037-101F1;0.205524!10172-103C1;0.00621423!10163-103B1;0.0202079!10076-102A4;0.0051235!10073-102A1;0.0119716!10036-101E9;0.089507!10195-103E6;0.00716409!10277-104E7;0.00825817!10434-106E2;0.0170281!10550-107I1;0.315447!10545-107H5;0.0870763!10544-107H4;0.687224!10704-109H2;0.662846!10510-107D6;0.0316329!10558-107I9;0.978896!10020-101D2;0.906174!10732-110B3;0.0110916!10049-101G4;0.694683!10698-109G5;0.60421!10437-106E5;0.136269!10417-106C3;0.240128!10035-101E8;0.474064!10171-103B9;0.01047!10157-103A4;0.0244064!10034-101E7;0.00680155!10072-101I9;0.00910677!10199-103F1;0.0810273!10200-103F2;0.00238691!10697-109G4;3.27208e-06!10723-110A3;0.990271!10179-103C8;0.568158!10160-103A7;0.0685617!10180-103C9;0.0711761!10162-103A9;0.0574197!10021-101D3;0.0222011!10840-111E3;0.0207316!10706-109H4;1.75448e-06!10033-101E6;0.101271!10032-101E5;0.00902533!10490-107B4;0.00870152!10439-106E7;0.0668643!10022-101D4;0.860226!10176-103C5;0.000126566!10469-106I1;0.0104293!10067-101I4;0.977147!10411-106B6;0.00448524!10471-106I3;0.300419!10030-101E3;0.1977!10475-106I7;0.000162506!10787-110H4;0.131905!10477-106I9;0.0371206!10695-109G2;0.625688!11771-123I7;0.00966353!11772-123I8;0.617803!11773-123I9;0.573597!10093-102C3;0.037244!10442-106F1;0.000408804!10442-106F1;1.41415e-06!10201-103F3;1.28883e-05!10639-108I9;0.00243687!11843-124H7;0.114666!11841-124H5;0.136702!10693-109F9;0.157338!10436-106E4;0.0572916!10483-107A6;0.681104!10282-104F3;0.712795!10023-101D5;0.0180771!10066-101I3;0.00733182!10065-101I2;0.000163455!10800-110I8;0.000201058!10610-108F7;0.339964!10841-111E4;0.43681!10541-107H1;0.00897313!10842-111E5;0.00844175!10562-108A4;0.444096!10024-101D6;0.617523!10064-101I1;0.000707937!10609-108F6;0.000504878!10048-101G3;0.340651!10781-110G7;0.000882653!10181-103D1;0.966738!10159-103A6;0.00524535!10056-101H2;0.00345124!10737-110B8;0.00288133!10025-101D7;0.174857!10044-101F8;0.99089!10424-106D1;0.0776838!10463-106H4;7.94724e-08!10616-108G4;0.730071!10486-107A9;0.975219!10062-101H8;0.217324!10202-103F4;0.000603963!10158-103A5;4.37449e-05!10441-106E9;0.00534155!10031-101E4;0.714867!10063-101H9;0.005588!10063-101H9;0.080338!11763-123H8;4.19658e-06!11765-123I1;0.0717624!11768-123I4;0.0576138!10807-111A6;0.176261!10790-110H7;0.0745868!10798-110I6;0.0243578!10786-110H3;0.972543!10591-108D6;0.0997363!10593-108D8;0.0762259!10590-108D5;0.246421!10026-101D8;0.000852813!10096-102C6;0.292087!10168-103B6;0.67965!10154-103A1;0.00763967!10209-103G2;0.00306192!10061-101H7;0.001502!10027-101D9;0.000761735!10043-101F7;0.0423076!10783-110G9;0.386369!10028-101E1;0.484074!10060-101H6;0.00771579!10203-103F5;0.000625535!10059-101H5;0.00198674!10047-101G2;9.3707e-05!10029-101E2;0.0299454!10058-101H4;0.00283804!10418-106C4;0.000320676!10492-107B6;0.568086!10694-109G1;0.00273925!10797-110I5;0.204439!10057-101H3;0.60136!10100-102D1;0.00759177!10055-101H1;0.000222885!10204-103F6;0.00114781!10191-103E2;0.0039544!10563-108A5;0.00647785
|name=CNhs11377_bl_f2
|name=CNhs11377_bl_f2
|tomtom_result=Trl#MA0205.1;-2;6.12833e-05;0.0291709;0.0583417;10;CCCGGCTCTCTG;TTGCTCTCTC;+!ECM23#MA0293.1;0;0.00743435;3.53875;1;11;CCCGGCTCTCTG;TTTAGATCTTT;-!GAT4#MA0302.1;0;0.0107238;5.10453;1;11;CCCGGCTCTCTG;TTTAGATCTTT;-!IXR1#MA0323.1;0;0.0108792;5.17848;1;12;CCCGGCTCTCTG;CCCCGCTTCCGGCTT;-
}}
}}

Latest revision as of 14:41, 7 September 2012

Full Name: CNhs11377_bl_f2

Motif matrix
POACGT
172.7838985926779361.487401717491453.199955756339768.54535493103299
288.74141648899803236.0461500844595544.35654284144232186.87250158264237
347.32692990918897233.4082432259036120.62887711207097154.65256075037874
489.182855612416949.000286247951616231.3677172007864226.46575193638753
559.31003023635557113.83973756747336351.525025976079531.341817217633842
60.0550.76279530143690.05.253815696105564
70.73455086621063730.00.0555.2820601313316
81.0840251741774585552.764535475011.08402517417745851.0840251741774585
9159.79633731488045183.676040185891425.2162242818193905207.32800921495104
1019.19449809000028278.34279530329157.62370124181584100.85561636243614
11165.4955356045732326.04852216527281469.71674299698888294.7558102307073
1247.41470361872115136.78089525810248319.105412386636752.715599734082026

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.1-26.12833e-050.02917090.058341710CCCGGCTCTCTGTTGCTCTCTC+
ECM23#MA0293.100.007434353.53875111CCCGGCTCTCTGTTTAGATCTTT-
GAT4#MA0302.100.01072385.10453111CCCGGCTCTCTGTTTAGATCTTT-
IXR1#MA0323.100.01087925.17848112CCCGGCTCTCTGCCCCGCTTCCGGCTT-
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