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MacroAPE 1083:KAISO f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;257.66247788884664;900.790031670873;211.65088007644692;640.3488153190856!2;4.599088698664084;1.4118545557428959;19.727913019652103;1984.7133...")
 
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129A6;0.729433!10809-111A8;0.236329!10597-108E3;0.40272!10717-109I6;0.00510264!10455-106G5;0.0153821!10534-107G3;0.00256711!10429-106D6;0.000668285!10464-106H5;0.0194584!10827-111C8;0.033262!10789-110H6;0.185139!10828-111C9;0.18398!10788-110H5;0.703845!10792-110H9;0.0909043!10765-110E9;0.820941!10829-111D1;0.226311!10830-111D2;0.00486385!10831-111D3;0.0890797!10832-111D4;0.0761557!10833-111D5;0.022484!10764-110E8;0.025166!10770-110F5;0.0324166!10399-106A3;0.330344!10400-106A4;0.00892306!10405-106A9;0.0143738!10834-111D6;0.00636238!10835-111D7;0.000616047!10836-111D8;0.00163503!10837-111D9;0.046692!10699-109G6;0.000627319!10802-111A1;0.0229372!10796-110I4;0.577536!10010-101C1;0.0252264!10810-111A9;0.047005!10421-106C7;0.009297!10708-109H6;0.253484!12235-129G3;0.182299!12236-129G4;0.317847!12237-129G5;0.0126131!10167-103B5;0.0588579!10151-102I7;0.140267!10428-106D5;0.0689483!10795-110I3;0.284713!10805-111A4;0.00804794!10052-101G7;0.00499828!10189-103D9;0.16436!10589-108D4;0.621239!10425-106D2;0.0142095!10427-106D4;0.724662!10702-109G9;0.000400119!10432-106D9;0.15782!10496-107C1;0.116589!10718-109I7;0.229726!10011-101C2;0.213868!10053-101G8;0.38265!10686-109F2;0.257543!10084-102B3;0.472853!10012-101C3;0.0186409!10085-102B4;0.0787978!10482-107A5;0.346993!10419-106C5;0.500296!10080-102A8;0.793131!10760-110E4;0.172018!10709-109H7;0.0768283!10710-109H8;0.0126886!10703-109H1;0.00709692!10719-109I8;0.00977559!10642-109A3;0.015453!10177-103C6;0.0113168!10164-103B2;0.157479!10173-103C2;0.111289!10166-103B4;0.218659!10083-102B2;0.101853!10188-103D8;0.1177!10552-107I3;0.105151!10553-107I4;0.0322049!10013-101C4;0.2157!10536-107G5;0.252472!10618-108G6;0.450689!10423-106C9;0.130844!10785-110H2;0.0567404!12238-129G6;0.604228!12239-129G7;0.63885!12240-129G8;0.215147!10416-106C2;0.218844!10801-110I9;0.0354324!10766-110F1;0.31668!10824-111C5;0.324003!10825-111C6;0.00267334!10826-111C7;0.00160641!10454-106G4;0.000887896!10409-106B4;0.00125301!10638-108I8;0.48497!10636-108I6;0.0414489!10513-107D9;0.062305!10420-106C6;0.136564!10082-102B1;0.0182368!10014-101C5;0.413886!10070-101I7;0.772079!10452-106G2;0.365746!10453-106G3;0.158868!10449-106F8;0.111254!10042-101F6;0.0547558!10069-101I6;0.0531382!10193-103E4;0.233702!10631-108I1;0.119451!10438-106E6;0.00128508!10488-107B2;0.0240231!10196-103E7;0.219207!10071-101I8;0.0296428!10071-101I8;0.651036!10041-101F5;0.614669!10451-106G1;0.183132!10450-106F9;0.0122938!10604-108F1;0.000264923!10605-108F2;0.034515!10606-108F3;0.196338!10603-108E9;0.0946025!10497-107C2;0.0843314!10448-106F7;0.907432!10643-109A4;0.256231!10426-106D3;0.144094!10431-106D8;0.00639408!10197-103E8;0.0678793!10443-106F2;0.0230592!10815-111B5;0.299542!10816-111B6;0.00707645!10817-111B7;0.00873682!10015-101C6;0.00966519!10410-106B5;0.782287!10054-101G9;0.632919!10758-110E2;0.121171!10711-109H9;0.225284!10040-101F4;0.0504648!10470-106I2;0.10125!10415-106C1;0.0870621!10198-103E9;0.461368!10614-108G2;0.174016!10612-108F9;0.9!10549-107H9;0.0868191!10615-108G3;0.100991!10487-107B1;0.0114445!10433-106E1;0.0110187!10688-109F4;0.0355959!10444-106F3;0.0815476!10444-106F3;0.537051!10485-107A8;0.520578!10413-106B8;0.014561!10175-103C4;0.00213651!10161-103A8;0.21423!12131-128D7;0.22141!10624-108H3;0.0700964!10712-109I1;0.536979!10205-103F7;0.213045!10206-103F8;0.132588!10207-103F9;0.135967!10050-101G5;0.162053!10051-101G6;0.308286!10016-101C7;0.0281931!10046-101G1;0.184065!10778-110G4;0.434132!10633-108I3;0.0314243!10818-111B8;0.0405423!10819-111B9;0.320975!10820-111C1;0.281573!10484-107A7;0.348982!10808-111A7;0.296765!10169-103B7;0.00182608!10153-102I9;0.0533707!13425-144D5;0.0484472!13433-144E4;0.00383862!13437-144E8;0.000929919!11904-125F5;0.00224484!11905-125F6;0.566759!10039-101F3;0.204357!10791-110H8;0.0714152!10017-101C8;0.136729!10045-101F9;0.0062146!10509-107D5;0.0877139!10839-111E2;0.102257!10692-109F8;0.129212!10079-102A7;0.366991!10078-102A6;0.0774437!10721-110A1;0.0411176!10569-108B2;0.0372354!10570-108B3;0.166351!10571-108B4;0.0400782!10647-109A8;0.438886!10752-110D5;0.00587514!10782-110G8;0.0865742!10726-110A6;0.517968!10018-101C9;0.539569!10086-102B5;0.0783165!10182-103D2;0.363486!10165-103B3;0.0786409!10499-107C4;0.0592975!10408-106B3;0.596323!10019-101D1;0.201571!10068-101I5;0.0704597!10075-102A3;0.709217!10077-102A5;0.025828!10727-110A7;0.619391!10775-110G1;0.0816187!10412-106B7;0.00302509!12231-129F8;0.344547!12232-129F9;0.373965!12233-129G1;0.113236!12234-129G2;0.0477079!10414-106B9;0.250569!10170-103B8;0.008008!10183-103D3;0.15424!10150-102I6;0.12378!10174-103C3;0.0867307!10155-103A2;0.107032!10038-101F2;0.0386866!10838-111E1;0.0405861!10759-110E3;0.00465625!10514-107E1;0.00658225!10465-106H6;0.0128277!10691-109F7;0.19452!10843-111E6;0.703078!10844-111E7;0.000697689!11747-123G1;0.0496956!11748-123G2;0.951603!11749-123G3;0.355123!11750-123G4;0.988068!11751-123G5;0.317977!11840-124H4;0.208323!11752-123G6;0.299376!11753-123G7;0.012184!11754-123G8;0.158634!11755-123G9;0.928152!11756-123H1;0.930679!11833-124G6;0.76755!11760-123H5;0.0234436!11836-124G9;0.767926!11758-123H3;0.578197!11835-124G8;0.131845!11762-123H7;0.0704349!11838-124H2;0.0268834!11757-123H2;0.0174888!11759-123H4;0.667485!11761-123H6;0.487091!11842-124H6;0.129313!11837-124H1;0.710861!10568-108B1;0.210523!13230-141I8;0.0329827!13231-141I9;0.486242!10696-109G3;0.498815!10493-107B7;0.996296!10494-107B8;0.792515!10850-111F4;0.967711!10851-111F5;0.674403!10852-111F6;0.210153!10853-111F7;0.515808!10854-111F8;0.865635!10855-111F9;0.375421!10856-111G1;0.0718636!10847-111F1;0.368959!10846-111E9;0.112879!10848-111F2;0.341377!10845-111E8;0.311142!10857-111G2;0.00632224!10858-111G3;0.329342!10156-103A3;0.815675!11901-125F2;0.10469!11902-125F3;0.527421!11903-125F4;0.378605!10689-109F5;0.498649!10648-109A9;0.389948!10784-110H1;0.178103!10744-110C6;0.431293!10772-110F7;0.343748!10474-106I6;0.0090701!10600-108E6;0.746384!10684-109E9;0.113618!12226-129F3;0.00130059!12227-129F4;0.910201!10508-107D4;0.226761!10539-107G8;0.0983355!10607-108F4;0.0405017!10555-107I6;0.00223889!10774-110F9;0.0142342!10637-108I7;0.00137551!10663-109C6;0.00112671!10728-110A8;0.161004!10729-110A9;0.00915134!10430-106D7;0.783278!10730-110B1;0.0157457!10813-111B3;0.0134218!10812-111B2;0.383725!10037-101F1;0.0336465!10172-103C1;0.0872729!10163-103B1;0.196192!10076-102A4;0.122491!10073-102A1;0.0796268!10036-101E9;0.61784!10195-103E6;0.0531972!10277-104E7;0.0879924!10434-106E2;0.45038!10550-107I1;0.205455!10545-107H5;0.0546679!10544-107H4;0.199798!10704-109H2;0.000834692!10510-107D6;0.191732!10558-107I9;0.0746393!10020-101D2;0.0483596!10732-110B3;0.392901!10049-101G4;0.738742!10698-109G5;0.00590459!10437-106E5;0.14915!10417-106C3;0.0347369!10035-101E8;0.741286!10171-103B9;0.0628387!10157-103A4;0.163476!10034-101E7;0.0868509!10072-101I9;0.0578097!10199-103F1;0.934027!10200-103F2;0.128351!10697-109G4;0.119612!10723-110A3;0.284312!10179-103C8;0.833815!10160-103A7;0.0673054!10180-103C9;0.0709081!10162-103A9;0.353072!10021-101D3;0.228687!10840-111E3;0.134194!10706-109H4;0.00814054!10033-101E6;0.76827!10032-101E5;0.0904048!10490-107B4;0.0535742!10439-106E7;0.00217889!10022-101D4;0.00278093!10176-103C5;0.277789!10469-106I1;0.132519!10067-101I4;0.817944!10411-106B6;0.661205!10471-106I3;0.0220165!10030-101E3;0.952931!10475-106I7;0.0379196!10787-110H4;0.00246583!10477-106I9;0.00775643!10695-109G2;2.67539e-05!11771-123I7;0.657407!11772-123I8;0.482819!11773-123I9;0.938518!10093-102C3;0.459256!10442-106F1;0.41588!10442-106F1;0.345244!10201-103F3;0.324891!10639-108I9;0.012939!11843-124H7;0.533024!11841-124H5;0.301633!10693-109F9;0.238931!10436-106E4;0.431112!10483-107A6;0.0149415!10282-104F3;0.0746077!10023-101D5;0.160443!10066-101I3;0.209113!10065-101I2;0.352083!10800-110I8;0.174609!10610-108F7;0.0011918!10841-111E4;0.144248!10541-107H1;0.130463!10842-111E5;0.00321804!10562-108A4;0.00954712!10024-101D6;0.272445!10064-101I1;0.936336!10609-108F6;0.844738!10048-101G3;0.121734!10781-110G7;0.628991!10181-103D1;0.995563!10159-103A6;0.0769448!10056-101H2;0.145519!10737-110B8;0.0699934!10025-101D7;0.943489!10044-101F8;0.390178!10424-106D1;0.411785!10463-106H4;0.037576!10616-108G4;0.142356!10486-107A9;0.135758!10062-101H8;0.280388!10202-103F4;0.767732!10158-103A5;0.354165!10441-106E9;0.156005!10031-101E4;0.0730629!10063-101H9;0.0347359!10063-101H9;0.799676!11763-123H8;0.516354!11765-123I1;0.598199!11768-123I4;0.204733!10807-111A6;0.871704!10790-110H7;0.0205538!10798-110I6;0.0277983!10786-110H3;0.0325629!10591-108D6;0.161139!10593-108D8;0.0131905!10590-108D5;0.166091!10026-101D8;0.0067799!10096-102C6;0.0721756!10168-103B6;0.956346!10154-103A1;0.199562!10209-103G2;0.173332!10061-101H7;0.280479!10027-101D9;0.456384!10043-101F7;0.0177863!10783-110G9;0.662216!10028-101E1;0.078548!10060-101H6;0.243988!10203-103F5;0.343288!10059-101H5;0.345492!10047-101G2;0.30577!10029-101E2;0.981613!10058-101H4;0.130943!10418-106C4;0.258576!10492-107B6;0.0191021!10694-109G1;0.00866537!10797-110I5;0.76244!10057-101H3;0.98151!10100-102D1;0.143256!10055-101H1;0.416301!10204-103F6;0.600248!10191-103E2;0.466955!10563-108A5;0.22098
|name=KAISO_f1
|name=KAISO_f1
|tomtom_result=UGA3#MA0410.1;-1;0.00163372;0.777652;1;8;CTCGCAGGAAGA;CGGCGGGA;+!Stat3#MA0144.1;-1;0.00530701;2.52614;1;10;CTCGCAGGAAGA;TTCCAGGAAG;+!STAT1#MA0137.2;2;0.00761485;3.62467;1;12;CTCGCAGGAAGA;GGTTTCCGGGAAATG;-!YJL103C#MA0427.1;-1;0.0102796;4.89311;1;11;CTCGCAGGAAGA;TCTCCGGAGCT;-!SUT1#MA0399.1;-2;0.0105932;5.04236;1;7;CTCGCAGGAAGA;CGCGGGG;+!ARO80#MA0273.1;5;0.013895;6.61404;1;12;CTCGCAGGAAGA;GATAATTCTCGGCAAGTATGT;+!NFIC#MA0161.1;0;0.0152999;7.28274;1;6;CTCGCAGGAAGA;TTGGCA;+!Tal1::Gata1#MA0140.1;0;0.0191067;9.09477;1;12;CTCGCAGGAAGA;CTGGTGGGGACAGATAAG;+!PUT3#MA0358.1;-2;0.0205509;9.78222;1;8;CTCGCAGGAAGA;CCCGGGAA;+
}}
}}

Latest revision as of 14:44, 7 September 2012

Full Name: KAISO_f1

Motif matrix
POACGT
1257.66247788884664900.790031670873211.65088007644692640.3488153190856
24.5990886986640841.411854555742895919.7279130196521031984.71334868119
3295.429664831525541059.2238955580744564.344349726662591.45429483898985
425.17364903127420637.6795954405544861947.39970704403570.1992534393868244
53.92831460010654961995.3331898605610.477210133785580.7134903607970537
61247.64637503276443.7516769815069733759.05415294098080.0
7621.35447088751150.01347.035543958006942.06219010973591
811.9831541857008017.0881845789150291776.9767785656231214.4040876250111
91794.5623564904847213.606542997740551.12940155586751661.1539039111559994
10823.6177858710014111.47043150982765689.6814118222019385.68257575222225
11361.0115728391968242.0765180166437834.0629415858018573.3011725136116
12732.6907440063584379.0100588885276357.6546527744916541.0967492858778

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
UGA3#MA0410.1-10.001633720.77765218CTCGCAGGAAGACGGCGGGA+
Stat3#MA0144.1-10.005307012.52614110CTCGCAGGAAGATTCCAGGAAG+
STAT1#MA0137.220.007614853.62467112CTCGCAGGAAGAGGTTTCCGGGAAATG-
YJL103C#MA0427.1-10.01027964.89311111CTCGCAGGAAGATCTCCGGAGCT-
SUT1#MA0399.1-20.01059325.0423617CTCGCAGGAAGACGCGGGG+
ARO80#MA0273.150.0138956.61404112CTCGCAGGAAGAGATAATTCTCGGCAAGTATGT+
NFIC#MA0161.100.01529997.2827416CTCGCAGGAAGATTGGCA+
Tal1::Gata1#MA0140.100.01910679.09477112CTCGCAGGAAGACTGGTGGGGACAGATAAG+
PUT3#MA0358.1-20.02055099.7822218CTCGCAGGAAGACCCGGGAA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:KAISO_f1&oldid=2134472"