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MacroAPE 1083:GAATTSGA,motif806: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.854;0.854;851.438;0.854!2;851.438;0.854;0.854;0.854!3;420.168;90.524;210.938;132.37!4;0.854;60.634;314.272;478.24!5;0.854;0.854;77.714;774...")
 
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|name=GAATTSGA,motif806,CNhs11977,T:854.0(30.02%),B:15132.7(21.13%),P:1e-28
|name=GAATTSGA,motif806,CNhs11977,T:854.0(30.02%),B:15132.7(21.13%),P:1e-28
|tomtom_result=GABPA#MA0062.2;3;0.00654553;3.11567;1;8;GAATTGGA;CCGGAAGTGGC;+
}}
}}

Latest revision as of 14:45, 7 September 2012

Full Name: GAATTSGA,motif806,CNhs11977,T:854.0(30.02%),B:15132.7(21.13%),P:1e-28

Motif matrix
POACGT
10.8540.854851.4380.854
2851.4380.8540.8540.854
3420.16890.524210.938132.37
40.85460.634314.272478.24
50.8540.85477.714774.578
60.854310.002379.176163.968
70.8540.854851.4380.854
8650.7480.85498.21104.188

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GABPA#MA0062.230.006545533.1156718GAATTGGACCGGAAGTGGC+
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