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MacroAPE 1083:Motif CAAGTNNCA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;176;0;0!02;176;0;0;0!03;176;0;0;0!04;0;0;176;0!05;0;0;0;176!06;44;44;44;44!07;44;44;44;44!08;0;176;0;0!09;176;0;0;0 |macroape_1083_sampl...")
 
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81899!10828-111C9;0.685154!10788-110H5;0.359709!10792-110H9;0.708444!10765-110E9;0.128417!10829-111D1;0.774425!10830-111D2;0.8094!10831-111D3;0.0446433!10832-111D4;0.431091!10833-111D5;0.210924!10764-110E8;0.342453!10770-110F5;0.469503!10399-106A3;0.600425!10400-106A4;0.310093!10405-106A9;0.487107!10834-111D6;0.166771!10835-111D7;0.645403!10836-111D8;0.244416!10837-111D9;0.891065!10699-109G6;0.539024!10802-111A1;0.96338!10796-110I4;0.380338!10010-101C1;0.425961!10810-111A9;0.564244!10421-106C7;0.269599!10708-109H6;0.588322!12235-129G3;0.666737!12236-129G4;0.0688827!12237-129G5;0.0372201!10167-103B5;0.117522!10151-102I7;0.602447!10428-106D5;0.89004!10795-110I3;0.101455!10805-111A4;0.215567!10052-101G7;0.818905!10189-103D9;0.408585!10589-108D4;0.691937!10425-106D2;0.683375!10427-106D4;0.253533!10702-109G9;0.659397!10432-106D9;0.336535!10496-107C1;0.826896!10718-109I7;0.820617!10011-101C2;0.760919!10053-101G8;0.55127!10686-109F2;0.69354!10084-102B3;0.481143!10012-101C3;0.734949!10085-102B4;0.88376!10482-107A5;0.454427!10419-106C5;0.654152!10080-102A8;0.917086!10760-110E4;0.29211!10709-109H7;0.474796!10710-109H8;0.943466!10703-109H1;0.541138!10719-109I8;0.632797!10642-109A3;0.629518!10177-103C6;0.448333!10164-103B2;0.291102!10173-103C2;0.691189!10166-103B4;0.0454601!10083-102B2;0.0460734!10188-103D8;0.131978!10552-107I3;0.808287!10553-107I4;0.33381!10013-101C4;0.586397!10536-107G5;0.540253!10618-108G6;0.150065!10423-106C9;0.583937!10785-110H2;0.260887!12238-129G6;0.247139!12239-129G7;0.00851725!12240-129G8;0.220872!10416-106C2;0.000821652!10801-110I9;0.247575!10766-110F1;0.916213!10824-111C5;0.682605!10825-111C6;0.104536!10826-111C7;0.119447!10454-106G4;0.138871!10409-106B4;0.264233!10638-108I8;0.450604!10636-108I6;0.727042!10513-107D9;0.749899!10420-106C6;0.389171!10082-102B1;0.340596!10014-101C5;0.970249!10070-101I7;0.898251!10452-106G2;0.755001!10453-106G3;0.0675016!10449-106F8;0.325263!10042-101F6;0.342098!10069-101I6;0.837461!10193-103E4;0.220024!10631-108I1;0.92672!10438-106E6;0.395117!10488-107B2;0.929669!10196-103E7;0.569614!10071-101I8;0.479731!10071-101I8;0.430227!10041-101F5;0.419433!10451-106G1;0.464321!10450-106F9;0.318789!10604-108F1;0.50239!10605-108F2;0.300488!10606-108F3;0.165691!10603-108E9;0.263268!10497-107C2;0.490841!10448-106F7;0.14722!10643-109A4;0.00146989!10426-106D3;0.33634!10431-106D8;0.912243!10197-103E8;0.285575!10443-106F2;0.255032!10815-111B5;0.0108825!10816-111B6;0.102076!10817-111B7;0.129963!10015-101C6;0.197063!10410-106B5;0.119186!10054-101G9;0.112028!10758-110E2;0.956788!10711-109H9;0.820602!10040-101F4;0.156207!10470-106I2;0.792227!10415-106C1;0.433379!10198-103E9;0.877338!10614-108G2;0.429996!10612-108F9;0.912762!10549-107H9;0.601351!10615-108G3;0.142902!10487-107B1;0.428159!10433-106E1;0.412968!10688-109F4;0.210383!10444-106F3;0.619802!10444-106F3;0.0106143!10485-107A8;0.00441615!10413-106B8;0.898848!10175-103C4;0.714359!10161-103A8;0.711608!12131-128D7;0.907713!10624-108H3;0.467772!10712-109I1;0.258586!10205-103F7;0.533662!10206-103F8;0.354394!10207-103F9;0.439498!10050-101G5;0.352994!10051-101G6;0.338071!10016-101C7;0.111031!10046-101G1;0.202991!10778-110G4;0.305044!10633-108I3;0.595494!10818-111B8;0.544621!10819-111B9;0.72957!10820-111C1;0.731026!10484-107A7;0.736745!10808-111A7;0.230591!10169-103B7;0.694571!10153-102I9;0.774394!13425-144D5;0.875058!13433-144E4;0.280181!13437-144E8;0.0785552!11904-125F5;0.105788!11905-125F6;0.549766!10039-101F3;0.355154!10791-110H8;0.794568!10017-101C8;0.617945!10045-101F9;0.839357!10509-107D5;0.523512!10839-111E2;0.0805464!10692-109F8;0.483708!10079-102A7;0.160714!10078-102A6;0.0967598!10721-110A1;0.150017!10569-108B2;0.168234!10570-108B3;0.677212!10571-108B4;0.39084!10647-109A8;0.92261!10752-110D5;0.468426!10782-110G8;0.902507!10726-110A6;0.947838!10018-101C9;0.14692!10086-102B5;0.0480957!10182-103D2;0.00177647!10165-103B3;0.710973!10499-107C4;0.934199!10408-106B3;0.55497!10019-101D1;0.442421!10068-101I5;0.810354!10075-102A3;0.982322!10077-102A5;0.678971!10727-110A7;0.109117!10775-110G1;0.628528!10412-106B7;0.186038!12231-129F8;0.753573!12232-129F9;0.810198!12233-129G1;0.722732!12234-129G2;0.844733!10414-106B9;0.853509!10170-103B8;0.195365!10183-103D3;0.40416!10150-102I6;0.643772!10174-103C3;0.796851!10155-103A2;0.785746!10038-101F2;0.755398!10838-111E1;0.844212!10759-110E3;0.247767!10514-107E1;0.866948!10465-106H6;0.844213!10691-109F7;0.00158109!10843-111E6;0.392321!10844-111E7;0.977618!11747-123G1;0.446765!11748-123G2;0.759786!11749-123G3;0.920631!11750-123G4;0.854947!11751-123G5;0.815388!11840-124H4;0.436841!11752-123G6;0.617992!11753-123G7;0.18874!11754-123G8;0.546351!11755-123G9;0.823248!11756-123H1;0.442868!11833-124G6;0.452265!11760-123H5;0.357451!11836-124G9;0.830075!11758-123H3;0.333158!11835-124G8;0.491854!11762-123H7;0.556857!11838-124H2;0.356502!11757-123H2;0.290739!11759-123H4;0.645389!11761-123H6;0.630754!11842-124H6;0.780243!11837-124H1;0.171573!10568-108B1;0.487843!13230-141I8;0.797963!13231-141I9;0.531312!10696-109G3;0.38423!10493-107B7;0.926098!10494-107B8;0.168323!10850-111F4;0.38255!10851-111F5;0.124297!10852-111F6;0.362577!10853-111F7;0.726245!10854-111F8;0.0390016!10855-111F9;0.60006!10856-111G1;0.676531!10847-111F1;0.560353!10846-111E9;0.185673!10848-111F2;0.770152!10845-111E8;0.714707!10857-111G2;0.966033!10858-111G3;0.223292!10156-103A3;0.535562!11901-125F2;0.889763!11902-125F3;0.0341349!11903-125F4;0.270989!10689-109F5;0.280051!10648-109A9;0.94793!10784-110H1;0.464699!10744-110C6;0.852652!10772-110F7;0.295707!10474-106I6;0.753641!10600-108E6;0.647722!10684-109E9;0.849478!12226-129F3;0.616499!12227-129F4;0.202635!10508-107D4;0.0415038!10539-107G8;0.381131!10607-108F4;0.371965!10555-107I6;0.805295!10774-110F9;0.635437!10637-108I7;0.863603!10663-109C6;0.475486!10728-110A8;0.67444!10729-110A9;0.385827!10430-106D7;0.416601!10730-110B1;0.674217!10813-111B3;0.647921!10812-111B2;0.615204!10037-101F1;0.0737495!10172-103C1;0.907712!10163-103B1;0.445909!10076-102A4;0.901596!10073-102A1;0.867441!10036-101E9;0.198655!10195-103E6;0.995339!10277-104E7;0.830923!10434-106E2;0.109621!10550-107I1;0.609199!10545-107H5;0.29822!10544-107H4;0.43928!10704-109H2;0.484575!10510-107D6;0.549686!10558-107I9;0.594858!10020-101D2;0.335334!10732-110B3;0.643146!10049-101G4;0.934409!10698-109G5;0.0702142!10437-106E5;0.250442!10417-106C3;0.745327!10035-101E8;0.481773!10171-103B9;0.820924!10157-103A4;0.522689!10034-101E7;0.794889!10072-101I9;0.884806!10199-103F1;0.11086!10200-103F2;0.0585986!10697-109G4;0.945291!10723-110A3;0.465173!10179-103C8;0.452372!10160-103A7;0.335293!10180-103C9;0.193399!10162-103A9;0.398601!10021-101D3;0.458728!10840-111E3;0.0260498!10706-109H4;0.921524!10033-101E6;0.616755!10032-101E5;0.974664!10490-107B4;0.901798!10439-106E7;0.375305!10022-101D4;0.641081!10176-103C5;0.761764!10469-106I1;0.43736!10067-101I4;0.336868!10411-106B6;0.973435!10471-106I3;0.421663!10030-101E3;0.779227!10475-106I7;0.580237!10787-110H4;0.268565!10477-106I9;0.659953!10695-109G2;0.713007!11771-123I7;0.708948!11772-123I8;0.675599!11773-123I9;0.480044!10093-102C3;0.849247!10442-106F1;0.00183451!10442-106F1;0.728727!10201-103F3;0.573699!10639-108I9;0.485213!11843-124H7;0.959164!11841-124H5;0.555737!10693-109F9;0.670776!10436-106E4;0.461904!10483-107A6;0.332196!10282-104F3;0.61726!10023-101D5;0.656426!10066-101I3;0.537268!10065-101I2;0.439722!10800-110I8;0.0953366!10610-108F7;0.512262!10841-111E4;0.0554422!10541-107H1;0.0391607!10842-111E5;0.0638795!10562-108A4;0.205471!10024-101D6;0.412849!10064-101I1;0.892282!10609-108F6;0.574305!10048-101G3;0.961722!10781-110G7;0.854008!10181-103D1;0.855742!10159-103A6;0.794349!10056-101H2;0.884364!10737-110B8;0.502017!10025-101D7;0.450374!10044-101F8;0.188364!10424-106D1;0.200555!10463-106H4;0.80104!10616-108G4;0.637404!10486-107A9;0.774743!10062-101H8;0.708687!10202-103F4;0.269204!10158-103A5;0.0114855!10441-106E9;0.729494!10031-101E4;0.324344!10063-101H9;0.999682!10063-101H9;0.327264!11763-123H8;0.467834!11765-123I1;0.382907!11768-123I4;0.366709!10807-111A6;0.582347!10790-110H7;0.765912!10798-110I6;0.898823!10786-110H3;0.891478!10591-108D6;0.566711!10593-108D8;0.673523!10590-108D5;0.661231!10026-101D8;0.827742!10096-102C6;0.0584839!10168-103B6;0.211948!10154-103A1;0.63027!10209-103G2;0.990722!10061-101H7;0.220942!10027-101D9;0.201372!10043-101F7;0.396636!10783-110G9;0.399807!10028-101E1;0.343176!10060-101H6;0.755702!10203-103F5;0.709535!10059-101H5;0.12557!10047-101G2;0.104885!10029-101E2;0.0167059!10058-101H4;0.132889!10418-106C4;0.0788023!10492-107B6;0.898221!10694-109G1;0.333441!10797-110I5;0.0960961!10057-101H3;0.346748!10100-102D1;0.0474105!10055-101H1;0.844445!10204-103F6;0.33369!10191-103E2;0.760917!10563-108A5;0.101729
|name=motif_CAAGTNNCA
|name=motif_CAAGTNNCA
|tomtom_result=tin#MA0247.1;2;0.00836871;3.98351;1;6;CAAGTAACA;CTCAAGTG;+!ceh-22#MA0264.1;3;0.0100569;4.7871;1;8;CAAGTAACA;TTTCAAGTGGT;-!Six4#MA0204.1;-3;0.0110704;5.26949;1;6;CAAGTAACA;GTATCA;-!vnd#MA0253.1;3;0.0126157;6.00506;1;6;CAAGTAACA;TTTCAAGTG;+
}}
}}

Latest revision as of 14:57, 7 September 2012

Full Name: motif_CAAGTNNCA

Motif matrix
POACGT
01017600
02176000
03176000
04001760
05000176
0644444444
0744444444
08017600
09176000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
tin#MA0247.120.008368713.9835116CAAGTAACACTCAAGTG+
ceh-22#MA0264.130.01005694.787118CAAGTAACATTTCAAGTGGT-
Six4#MA0204.1-30.01107045.2694916CAAGTAACAGTATCA-
vnd#MA0253.130.01261576.0050616CAAGTAACATTTCAAGTG+
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