MacroAPE 1083:PROP1 f1: Difference between revisions
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(Created page with "{{Macroape_1083
|PWM=PO;A;C;G;T!1;2.275280898876405;1.264044943820223;4.196629213483149;1.264044943820223!2;6.977528089887644;0.0;0.0;2.022471910112364!3;0.0;3.03370786516853...") |
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| ||
|name=PROP1_f1 | |name=PROP1_f1 | ||
|tomtom_result=hbn#MA0226.1;-3;0.000245445;0.116832;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!Lhx3#MA0135.1;0;0.000346765;0.16506;0.042878;13;GAGTAATTAATATAA;GATTAATTAATTT;-!CG15696#MA0176.1;-3;0.000394206;0.187642;0.042878;7;GAGTAATTAATATAA;CAATTAA;-!repo#MA0240.1;-3;0.000394206;0.187642;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!CG32532#MA0179.1;-3;0.000494044;0.235165;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!otp#MA0236.1;-3;0.00055177;0.262643;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!PHDP#MA0457.1;-3;0.00055177;0.262643;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!CG32105#MA0178.1;-3;0.000615145;0.292809;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!Lim1#MA0194.1;-3;0.000615145;0.292809;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!NK7.1#MA0196.1;-3;0.000615145;0.292809;0.042878;7;GAGTAATTAATATAA;CAATTAA;-!abd-A#MA0206.1;-3;0.000684044;0.325605;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!al#MA0208.1;-3;0.000684044;0.325605;0.042878;7;GAGTAATTAATATAA;TAATTAA;+!slou#MA0245.1;-3;0.000684044;0.325605;0.042878;7;GAGTAATTAATATAA;CAATTAA;-!Vsx1#MA0181.1;-3;0.000757642;0.360638;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!HGTX#MA0191.1;-3;0.000757642;0.360638;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!CG11294#MA0172.1;-3;0.000835683;0.397785;0.042878;7;GAGTAATTAATATAA;TAATTAA;-!Dll#MA0187.1;-2;0.000835683;0.397785;0.042878;7;GAGTAATTAATATAA;GTAATTA;-!C15#MA0170.1;-3;0.000918996;0.437442;0.0445331;7;GAGTAATTAATATAA;TAATTAA;-!unpg#MA0251.1;-3;0.00100773;0.479681;0.046263;7;GAGTAATTAATATAA;TAATTAA;-!unc-4#MA0250.1;-3;0.001102;0.524553;0.0480611;7;GAGTAATTAATATAA;CAATTAA;-!Ubx#MA0094.2;-3;0.0012402;0.590337;0.0481707;8;GAGTAATTAATATAA;TAATTAAA;-!en#MA0220.1;-3;0.00130964;0.623387;0.0481707;7;GAGTAATTAATATAA;TAATTAA;-!lab#MA0230.1;-3;0.00130964;0.623387;0.0481707;7;GAGTAATTAATATAA;TAATTAA;-!CG13424#MA0175.1;-3;0.00142404;0.677842;0.0481707;7;GAGTAATTAATATAA;CAATTAA;-!Prrx2#MA0075.1;-4;0.00151442;0.720863;0.0481707;5;GAGTAATTAATATAA;AATTA;+!Nobox#MA0125.1;-1;0.00154517;0.735501;0.0481707;8;GAGTAATTAATATAA;ACCAATTA;-!Awh#MA0167.1;-3;0.00154632;0.736048;0.0481707;7;GAGTAATTAATATAA;TAATTAA;-!Hmx#MA0192.1;-3;0.00154632;0.736048;0.0481707;7;GAGTAATTAATATAA;CAATTAA;-!ftz#MA0225.1;-3;0.00167714;0.798317;0.0504443;7;GAGTAATTAATATAA;TAATTAA;-!CG7056#MA0183.1;-3;0.00191075;0.909516;0.053611;8;GAGTAATTAATATAA;TAATTAAA;-!bsh#MA0214.1;-3;0.00196681;0.936201;0.053611;7;GAGTAATTAATATAA;CAATTAA;-!CG34031#MA0444.1;-3;0.00196681;0.936201;0.053611;7;GAGTAATTAATATAA;CAATTAA;-!Lim3#MA0195.1;-3;0.00229727;1.0935;0.0589353;7;GAGTAATTAATATAA;TAATTAA;-!zen2#MA0257.1;-3;0.00229727;1.0935;0.0589353;7;GAGTAATTAATATAA;TAATTAA;-!Vsx2#MA0180.1;-2;0.00262048;1.24735;0.0633074;9;GAGTAATTAATATAA;CTAATTAAA;-!CG11085#MA0171.1;-3;0.00267152;1.27164;0.0633074;7;GAGTAATTAATATAA;CAATTAA;-!Oct#MA0197.1;-3;0.00268543;1.27827;0.0633074;8;GAGTAATTAATATAA;TAATTAAA;-!YOX1#MA0433.1;-2;0.00286946;1.36586;0.0658655;8;GAGTAATTAATATAA;TTAATTAA;-!Rx#MA0202.1;-3;0.00309605;1.47372;0.0675133;7;GAGTAATTAATATAA;TAATTAG;-!H2.0#MA0448.1;-3;0.00309605;1.47372;0.0675133;7;GAGTAATTAATATAA;TAATTAA;-!Antp#MA0166.1;-3;0.00332842;1.58433;0.0708103;7;GAGTAATTAATATAA;TCATTAA;-!E5#MA0189.1;-3;0.00357497;1.70169;0.0742446;7;GAGTAATTAATATAA;TAATTAA;-!NHP6A#MA0345.1;-1;0.00369651;1.75954;0.0743614;14;GAGTAATTAATATAA;TCATTTTTATATATAGGTCAT;-!exex#MA0224.1;-2;0.00383635;1.8261;0.0743614;7;GAGTAATTAATATAA;GTAATTA;+!exex#MA0224.1;-2;0.00383635;1.8261;0.0743614;7;GAGTAATTAATATAA;GTAATTA;+!OdsH#MA0455.1;-3;0.00411353;1.95804;0.0763412;7;GAGTAATTAATATAA;TAATTAG;-!OdsH#MA0455.1;-3;0.00411353;1.95804;0.0763412;7;GAGTAATTAATATAA;TAATTAG;-!NHP6B#MA0346.1;0;0.0044258;2.10668;0.0804252;15;GAGTAATTAATATAA;TCATATTATATATAAATAAA;-!B-H2#MA0169.1;-3;0.00504714;2.40244;0.084661;7;GAGTAATTAATATAA;CAATTAA;-!CG18599#MA0177.1;-3;0.00504714;2.40244;0.084661;7;GAGTAATTAATATAA;TAATTAA;-!CG9876#MA0184.1;-3;0.00504714;2.40244;0.084661;7;GAGTAATTAATATAA;TAATTAG;-!tup#MA0248.1;-3;0.00504714;2.40244;0.084661;7;GAGTAATTAATATAA;CAATTAA;-!ems#MA0219.1;-3;0.00539651;2.56874;0.0888135;7;GAGTAATTAATATAA;TCATTAA;-!btn#MA0215.1;-3;0.00576718;2.74518;0.0931561;7;GAGTAATTAATATAA;TCATTAA;-!Nkx2-5#MA0063.1;-3;0.00616047;2.93239;0.0976997;7;GAGTAATTAATATAA;CAATTAA;-!ap#MA0209.1;-3;0.00701858;3.34084;0.105551;7;GAGTAATTAATATAA;TAATTAG;-!pb#MA0238.1;-3;0.00701858;3.34084;0.105551;7;GAGTAATTAATATAA;TAATTAA;-!ro#MA0241.1;-3;0.00701858;3.34084;0.105551;7;GAGTAATTAATATAA;TAATTAG;-!inv#MA0229.1;-3;0.00733223;3.49014;0.107027;8;GAGTAATTAATATAA;TAATTAGA;-!CG11617#MA0173.1;-6;0.00797722;3.79716;0.110447;7;GAGTAATTAATATAA;TTAACAT;+!ind#MA0228.1;-3;0.00797722;3.79716;0.110447;7;GAGTAATTAATATAA;TAATTAG;-!Pdx1#MA0132.1;-4;0.00833899;3.96936;0.111903;6;GAGTAATTAATATAA;AATTAG;-!ARID3A#MA0151.1;-5;0.00833899;3.96936;0.111903;6;GAGTAATTAATATAA;ATTAAA;+!Pph13#MA0200.1;-3;0.00849687;4.04451;0.112294;7;GAGTAATTAATATAA;TAATTAG;-!CG42234#MA0174.1;-3;0.00904531;4.30557;0.117758;7;GAGTAATTAATATAA;TAATAAA;-!PHO2#MA0356.1;-4;0.00954305;4.54249;0.119928;6;GAGTAATTAATATAA;TATTAT;-!B-H1#MA0168.1;-3;0.00962447;4.58125;0.119928;7;GAGTAATTAATATAA;CAATTAA;-!Dr#MA0188.1;-2;0.00962447;4.58125;0.119928;7;GAGTAATTAATATAA;CCAATTA;+!lbl#MA0232.1;-3;0.0102109;4.86037;0.124001;6;GAGTAATTAATATAA;TAATTA;-!eve#MA0221.1;-3;0.0102356;4.87216;0.124001;7;GAGTAATTAATATAA;TCATTAG;-!Ubx#MA0094.2;-5;0.0108428;5.16116;0.129557;4;GAGTAATTAATATAA;ATTA;-!CG4328#MA0182.1;-3;0.0138271;6.58168;0.15747;7;GAGTAATTAATATAA;CAATAAA;-!onecut#MA0235.1;-3;0.0138271;6.58168;0.15747;7;GAGTAATTAATATAA;AAATCAA;-!SMP1#MA0383.1;0;0.0149294;7.10639;0.160768;15;GAGTAATTAATATAA;TGCTAATTTAATTATAGGTAA;-!TBP#MA0386.1;3;0.0149294;7.10639;0.160768;15;GAGTAATTAATATAA;GACTAGATATATATATTCGAT;+!SPT23#MA0388.1;-2;0.015316;7.29042;0.161696;8;GAGTAATTAATATAA;GAAATCAA;+!cad#MA0216.1;-3;0.0155492;7.40141;0.161696;7;GAGTAATTAATATAA;CAATAAA;-!Scr#MA0203.1;-3;0.0164793;7.84415;0.167141;7;GAGTAATTAATATAA;TCATTAA;-!Dfd#MA0186.1;-3;0.0184861;8.79936;0.183233;7;GAGTAATTAATATAA;TCATTAA;- | |||
}} | }} |
Latest revision as of 14:57, 7 September 2012
Full Name: PROP1_f1
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
hbn#MA0226.1 | -3 | 0.000245445 | 0.116832 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Lhx3#MA0135.1 | 0 | 0.000346765 | 0.16506 | 0.042878 | 13 | GAGTAATTAATATAA | GATTAATTAATTT | - |
CG15696#MA0176.1 | -3 | 0.000394206 | 0.187642 | 0.042878 | 7 | GAGTAATTAATATAA | CAATTAA | - |
repo#MA0240.1 | -3 | 0.000394206 | 0.187642 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG32532#MA0179.1 | -3 | 0.000494044 | 0.235165 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
otp#MA0236.1 | -3 | 0.00055177 | 0.262643 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
PHDP#MA0457.1 | -3 | 0.00055177 | 0.262643 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG32105#MA0178.1 | -3 | 0.000615145 | 0.292809 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Lim1#MA0194.1 | -3 | 0.000615145 | 0.292809 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
NK7.1#MA0196.1 | -3 | 0.000615145 | 0.292809 | 0.042878 | 7 | GAGTAATTAATATAA | CAATTAA | - |
abd-A#MA0206.1 | -3 | 0.000684044 | 0.325605 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
al#MA0208.1 | -3 | 0.000684044 | 0.325605 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | + |
slou#MA0245.1 | -3 | 0.000684044 | 0.325605 | 0.042878 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Vsx1#MA0181.1 | -3 | 0.000757642 | 0.360638 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
HGTX#MA0191.1 | -3 | 0.000757642 | 0.360638 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG11294#MA0172.1 | -3 | 0.000835683 | 0.397785 | 0.042878 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Dll#MA0187.1 | -2 | 0.000835683 | 0.397785 | 0.042878 | 7 | GAGTAATTAATATAA | GTAATTA | - |
C15#MA0170.1 | -3 | 0.000918996 | 0.437442 | 0.0445331 | 7 | GAGTAATTAATATAA | TAATTAA | - |
unpg#MA0251.1 | -3 | 0.00100773 | 0.479681 | 0.046263 | 7 | GAGTAATTAATATAA | TAATTAA | - |
unc-4#MA0250.1 | -3 | 0.001102 | 0.524553 | 0.0480611 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Ubx#MA0094.2 | -3 | 0.0012402 | 0.590337 | 0.0481707 | 8 | GAGTAATTAATATAA | TAATTAAA | - |
en#MA0220.1 | -3 | 0.00130964 | 0.623387 | 0.0481707 | 7 | GAGTAATTAATATAA | TAATTAA | - |
lab#MA0230.1 | -3 | 0.00130964 | 0.623387 | 0.0481707 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG13424#MA0175.1 | -3 | 0.00142404 | 0.677842 | 0.0481707 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Prrx2#MA0075.1 | -4 | 0.00151442 | 0.720863 | 0.0481707 | 5 | GAGTAATTAATATAA | AATTA | + |
Nobox#MA0125.1 | -1 | 0.00154517 | 0.735501 | 0.0481707 | 8 | GAGTAATTAATATAA | ACCAATTA | - |
Awh#MA0167.1 | -3 | 0.00154632 | 0.736048 | 0.0481707 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Hmx#MA0192.1 | -3 | 0.00154632 | 0.736048 | 0.0481707 | 7 | GAGTAATTAATATAA | CAATTAA | - |
ftz#MA0225.1 | -3 | 0.00167714 | 0.798317 | 0.0504443 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG7056#MA0183.1 | -3 | 0.00191075 | 0.909516 | 0.053611 | 8 | GAGTAATTAATATAA | TAATTAAA | - |
bsh#MA0214.1 | -3 | 0.00196681 | 0.936201 | 0.053611 | 7 | GAGTAATTAATATAA | CAATTAA | - |
CG34031#MA0444.1 | -3 | 0.00196681 | 0.936201 | 0.053611 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Lim3#MA0195.1 | -3 | 0.00229727 | 1.0935 | 0.0589353 | 7 | GAGTAATTAATATAA | TAATTAA | - |
zen2#MA0257.1 | -3 | 0.00229727 | 1.0935 | 0.0589353 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Vsx2#MA0180.1 | -2 | 0.00262048 | 1.24735 | 0.0633074 | 9 | GAGTAATTAATATAA | CTAATTAAA | - |
CG11085#MA0171.1 | -3 | 0.00267152 | 1.27164 | 0.0633074 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Oct#MA0197.1 | -3 | 0.00268543 | 1.27827 | 0.0633074 | 8 | GAGTAATTAATATAA | TAATTAAA | - |
YOX1#MA0433.1 | -2 | 0.00286946 | 1.36586 | 0.0658655 | 8 | GAGTAATTAATATAA | TTAATTAA | - |
Rx#MA0202.1 | -3 | 0.00309605 | 1.47372 | 0.0675133 | 7 | GAGTAATTAATATAA | TAATTAG | - |
H2.0#MA0448.1 | -3 | 0.00309605 | 1.47372 | 0.0675133 | 7 | GAGTAATTAATATAA | TAATTAA | - |
Antp#MA0166.1 | -3 | 0.00332842 | 1.58433 | 0.0708103 | 7 | GAGTAATTAATATAA | TCATTAA | - |
E5#MA0189.1 | -3 | 0.00357497 | 1.70169 | 0.0742446 | 7 | GAGTAATTAATATAA | TAATTAA | - |
NHP6A#MA0345.1 | -1 | 0.00369651 | 1.75954 | 0.0743614 | 14 | GAGTAATTAATATAA | TCATTTTTATATATAGGTCAT | - |
exex#MA0224.1 | -2 | 0.00383635 | 1.8261 | 0.0743614 | 7 | GAGTAATTAATATAA | GTAATTA | + |
exex#MA0224.1 | -2 | 0.00383635 | 1.8261 | 0.0743614 | 7 | GAGTAATTAATATAA | GTAATTA | + |
OdsH#MA0455.1 | -3 | 0.00411353 | 1.95804 | 0.0763412 | 7 | GAGTAATTAATATAA | TAATTAG | - |
OdsH#MA0455.1 | -3 | 0.00411353 | 1.95804 | 0.0763412 | 7 | GAGTAATTAATATAA | TAATTAG | - |
NHP6B#MA0346.1 | 0 | 0.0044258 | 2.10668 | 0.0804252 | 15 | GAGTAATTAATATAA | TCATATTATATATAAATAAA | - |
B-H2#MA0169.1 | -3 | 0.00504714 | 2.40244 | 0.084661 | 7 | GAGTAATTAATATAA | CAATTAA | - |
CG18599#MA0177.1 | -3 | 0.00504714 | 2.40244 | 0.084661 | 7 | GAGTAATTAATATAA | TAATTAA | - |
CG9876#MA0184.1 | -3 | 0.00504714 | 2.40244 | 0.084661 | 7 | GAGTAATTAATATAA | TAATTAG | - |
tup#MA0248.1 | -3 | 0.00504714 | 2.40244 | 0.084661 | 7 | GAGTAATTAATATAA | CAATTAA | - |
ems#MA0219.1 | -3 | 0.00539651 | 2.56874 | 0.0888135 | 7 | GAGTAATTAATATAA | TCATTAA | - |
btn#MA0215.1 | -3 | 0.00576718 | 2.74518 | 0.0931561 | 7 | GAGTAATTAATATAA | TCATTAA | - |
Nkx2-5#MA0063.1 | -3 | 0.00616047 | 2.93239 | 0.0976997 | 7 | GAGTAATTAATATAA | CAATTAA | - |
ap#MA0209.1 | -3 | 0.00701858 | 3.34084 | 0.105551 | 7 | GAGTAATTAATATAA | TAATTAG | - |
pb#MA0238.1 | -3 | 0.00701858 | 3.34084 | 0.105551 | 7 | GAGTAATTAATATAA | TAATTAA | - |
ro#MA0241.1 | -3 | 0.00701858 | 3.34084 | 0.105551 | 7 | GAGTAATTAATATAA | TAATTAG | - |
inv#MA0229.1 | -3 | 0.00733223 | 3.49014 | 0.107027 | 8 | GAGTAATTAATATAA | TAATTAGA | - |
CG11617#MA0173.1 | -6 | 0.00797722 | 3.79716 | 0.110447 | 7 | GAGTAATTAATATAA | TTAACAT | + |
ind#MA0228.1 | -3 | 0.00797722 | 3.79716 | 0.110447 | 7 | GAGTAATTAATATAA | TAATTAG | - |
Pdx1#MA0132.1 | -4 | 0.00833899 | 3.96936 | 0.111903 | 6 | GAGTAATTAATATAA | AATTAG | - |
ARID3A#MA0151.1 | -5 | 0.00833899 | 3.96936 | 0.111903 | 6 | GAGTAATTAATATAA | ATTAAA | + |
Pph13#MA0200.1 | -3 | 0.00849687 | 4.04451 | 0.112294 | 7 | GAGTAATTAATATAA | TAATTAG | - |
CG42234#MA0174.1 | -3 | 0.00904531 | 4.30557 | 0.117758 | 7 | GAGTAATTAATATAA | TAATAAA | - |
PHO2#MA0356.1 | -4 | 0.00954305 | 4.54249 | 0.119928 | 6 | GAGTAATTAATATAA | TATTAT | - |
B-H1#MA0168.1 | -3 | 0.00962447 | 4.58125 | 0.119928 | 7 | GAGTAATTAATATAA | CAATTAA | - |
Dr#MA0188.1 | -2 | 0.00962447 | 4.58125 | 0.119928 | 7 | GAGTAATTAATATAA | CCAATTA | + |
lbl#MA0232.1 | -3 | 0.0102109 | 4.86037 | 0.124001 | 6 | GAGTAATTAATATAA | TAATTA | - |
eve#MA0221.1 | -3 | 0.0102356 | 4.87216 | 0.124001 | 7 | GAGTAATTAATATAA | TCATTAG | - |
Ubx#MA0094.2 | -5 | 0.0108428 | 5.16116 | 0.129557 | 4 | GAGTAATTAATATAA | ATTA | - |
CG4328#MA0182.1 | -3 | 0.0138271 | 6.58168 | 0.15747 | 7 | GAGTAATTAATATAA | CAATAAA | - |
onecut#MA0235.1 | -3 | 0.0138271 | 6.58168 | 0.15747 | 7 | GAGTAATTAATATAA | AAATCAA | - |
SMP1#MA0383.1 | 0 | 0.0149294 | 7.10639 | 0.160768 | 15 | GAGTAATTAATATAA | TGCTAATTTAATTATAGGTAA | - |
TBP#MA0386.1 | 3 | 0.0149294 | 7.10639 | 0.160768 | 15 | GAGTAATTAATATAA | GACTAGATATATATATTCGAT | + |
SPT23#MA0388.1 | -2 | 0.015316 | 7.29042 | 0.161696 | 8 | GAGTAATTAATATAA | GAAATCAA | + |
cad#MA0216.1 | -3 | 0.0155492 | 7.40141 | 0.161696 | 7 | GAGTAATTAATATAA | CAATAAA | - |
Scr#MA0203.1 | -3 | 0.0164793 | 7.84415 | 0.167141 | 7 | GAGTAATTAATATAA | TCATTAA | - |
Dfd#MA0186.1 | -3 | 0.0184861 | 8.79936 | 0.183233 | 7 | GAGTAATTAATATAA | TCATTAA | - |