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MacroAPE 1083:Motif GTACTN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;176;0!02;0;0;0;176!03;176;0;0;0!04;0;176;0;0!05;0;0;0;176!06;44;44;44;44 |macroape_1083_sample_pvalues=11376-118A8;0.900008!11327-117E...")
 
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0850-111F4;0.806368!10851-111F5;0.371464!10852-111F6;0.914211!10853-111F7;0.786113!10854-111F8;0.303699!10855-111F9;0.579743!10856-111G1;0.455091!10847-111F1;0.45892!10846-111E9;0.964057!10848-111F2;0.216783!10845-111E8;0.52897!10857-111G2;0.0469963!10858-111G3;0.812519!10156-103A3;0.684876!11901-125F2;0.453724!11902-125F3;0.804229!11903-125F4;0.814212!10689-109F5;0.667316!10648-109A9;0.216466!10784-110H1;0.765981!10744-110C6;0.927934!10772-110F7;0.0964154!10474-106I6;0.786563!10600-108E6;0.234555!10684-109E9;0.56854!12226-129F3;0.925353!12227-129F4;0.297477!10508-107D4;0.471085!10539-107G8;0.951824!10607-108F4;0.391823!10555-107I6;0.884517!10774-110F9;0.93199!10637-108I7;0.830136!10663-109C6;0.2242!10728-110A8;0.869007!10729-110A9;0.630009!10430-106D7;0.690857!10730-110B1;0.956348!10813-111B3;0.659318!10812-111B2;0.569337!10037-101F1;0.946205!10172-103C1;0.39557!10163-103B1;0.626832!10076-102A4;0.404294!10073-102A1;0.672667!10036-101E9;0.916358!10195-103E6;0.344722!10277-104E7;0.519748!10434-106E2;0.902987!10550-107I1;0.939125!10545-107H5;0.783907!10544-107H4;0.954968!10704-109H2;0.73447!10510-107D6;0.503115!10558-107I9;0.193025!10020-101D2;0.617804!10732-110B3;0.0799892!10049-101G4;0.834612!10698-109G5;0.498735!10437-106E5;0.576354!10417-106C3;0.807374!10035-101E8;0.573231!10171-103B9;0.439737!10157-103A4;0.728186!10034-101E7;0.417279!10072-101I9;0.421849!10199-103F1;0.968755!10200-103F2;0.840473!10697-109G4;0.215388!10723-110A3;0.83405!10179-103C8;0.596135!10160-103A7;0.689008!10180-103C9;0.313519!10162-103A9;0.962206!10021-101D3;0.622165!10840-111E3;0.220518!10706-109H4;0.60033!10033-101E6;0.609429!10032-101E5;0.472724!10490-107B4;0.385689!10439-106E7;0.576967!10022-101D4;0.826158!10176-103C5;0.336346!10469-106I1;0.57249!10067-101I4;0.7336!10411-106B6;0.597809!10471-106I3;0.298327!10030-101E3;0.30446!10475-106I7;0.148855!10787-110H4;0.758256!10477-106I9;0.897441!10695-109G2;0.361476!11771-123I7;0.984299!11772-123I8;0.643868!11773-123I9;0.90329!10093-102C3;0.406719!10442-106F1;0.975462!10442-106F1;0.578221!10201-103F3;0.483577!10639-108I9;0.728097!11843-124H7;0.830659!11841-124H5;0.140009!10693-109F9;0.0769009!10436-106E4;0.266572!10483-107A6;0.697341!10282-104F3;0.139105!10023-101D5;0.873658!10066-101I3;0.447645!10065-101I2;0.539241!10800-110I8;0.3779!10610-108F7;0.734253!10841-111E4;0.977196!10541-107H1;0.941958!10842-111E5;0.822219!10562-108A4;0.462223!10024-101D6;0.644797!10064-101I1;0.644187!10609-108F6;0.880145!10048-101G3;0.669486!10781-110G7;0.254173!10181-103D1;0.501629!10159-103A6;0.531408!10056-101H2;0.381903!10737-110B8;0.501624!10025-101D7;0.933176!10044-101F8;0.407716!10424-106D1;0.223529!10463-106H4;0.446408!10616-108G4;0.719551!10486-107A9;0.882689!10062-101H8;0.91853!10202-103F4;0.740016!10158-103A5;0.873655!10441-106E9;0.724263!10031-101E4;0.587175!10063-101H9;0.334763!10063-101H9;0.902594!11763-123H8;0.484356!11765-123I1;0.183865!11768-123I4;0.313434!10807-111A6;0.641449!10790-110H7;0.857561!10798-110I6;0.793791!10786-110H3;0.731823!10591-108D6;0.600075!10593-108D8;0.621286!10590-108D5;0.51529!10026-101D8;0.684459!10096-102C6;0.632627!10168-103B6;0.977196!10154-103A1;0.692529!10209-103G2;0.573104!10061-101H7;0.251466!10027-101D9;0.350197!10043-101F7;0.294146!10783-110G9;0.188127!10028-101E1;0.681699!10060-101H6;0.112589!10203-103F5;0.14263!10059-101H5;0.28135!10047-101G2;0.400806!10029-101E2;0.0073472!10058-101H4;0.224637!10418-106C4;0.447031!10492-107B6;0.821606!10694-109G1;0.906!10797-110I5;0.876648!10057-101H3;0.629503!10100-102D1;0.108963!10055-101H1;0.213746!10204-103F6;0.706766!10191-103E2;0.363588!10563-108A5;0.514334
|name=motif_GTACTN
|name=motif_GTACTN
|tomtom_result=HMG-1#MA0044.1;3;0.00951076;4.52712;1;6;GTACTA;GTTGTACTC;+
}}
}}

Latest revision as of 15:04, 7 September 2012

Full Name: motif_GTACTN

Motif matrix
POACGT
01001760
02000176
03176000
04017600
05000176
0644444444

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HMG-1#MA0044.130.009510764.5271216GTACTAGTTGTACTC+
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