Personal tools

MCL coexpression mm9:1307: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.111349957755186,-0.519077070725277,-0.48328232938228,-0.512722611981812,-0.454683783067199,-0.458724562884919,-0.432108707902008,-0.652106334461255,-0.563305554327245,-0.578382558400693,-0.648427399690435,-0.664165805320121,-0.637737717674699,-0.611524929703433,-0.591278247033921,-0.600923274116146,-0.733201059592651,-0.594055825577168,-0.611851879164578,-0.633389377841358,-0.128580248454128,-0.500646072166785,-0.487852779164851,-0.539135320116755,-0.496059069191307,-0.562727686650889,-0.535771935742334,-0.497838023503444,-0.527149366927912,-0.511840149374599,-0.586137375247114,-0.656007744016067,-0.698502734835838,-0.733201059592651,-0.479292670553873,-0.506805560814009,-0.516554524961712,-0.614071850633652,-0.630624410778792,-0.681346406649765,-0.607147643704947,-0.606196578268341,-0.634448269226903,0.1932457009661,0.183760192520486,0.159819623335784,0.351964358998535,0.323254580745532,0.210113196634878,0.228970734868707,0.21763456524539,0.22633953587474,-0.590232367519015,-0.649552340973579,-0.582163453856384,0.157075133707785,0.351097371294636,0.351375710226196,0.225497509127166,0.171110483811972,0.171077447346275,0.258154107711806,0.187029444376954,-0.376040251856806,-0.40197104118601,-0.324567293127769,0.180454040262185,0.0674658287527794,-0.00875692448010048,-0.039027047688183,-0.0776354858352503,-0.0507399577907791,-0.00387573272382258,0.0177178577438203,0.0900171434029418,-0.00463856994161253,-0.262228810453892,-0.14919879931628,-0.207458635454139,0.125394235183787,0.0538843200092595,0.15367369204499,-0.210485692856163,-0.102370039529235,-0.128017059817981,0.118890333338224,0.107330924240964,0.107658243026652,-0.0652835484680565,-0.0268637898711144,-0.048594951314259,-0.165067856115272,-0.167356088752264,-0.275721549853375,-0.322280807601797,-0.269440362798128,-0.0763202293187717,-0.00772778183204,-0.021948189362732,-0.00494573297251949,0.263498979603803,0.484385540383309,0.690898098326029,0.775709997554393,-0.123315865330662,-0.107953255238666,-0.265321850996986,-0.145543175115465,-0.52584195107235,0.0102097886173377,0.227755825125933,0.0814508498285785,0.109199322131435,3.88827914253216e-05,0.216219494264025,0.0814356103433676,-0.0411801439092608,0.247552749324761,-0.311720323599376,0.283250090601141,-0.0417476071446075,-0.0700375391951784,-0.392277077472969,-0.242540318908087,-0.207242963154205,-0.333608190482117,-0.507923553712678,-0.588735008285788,-0.535671657877633,-0.0719542989203497,-0.304811714999768,-0.0675270022230836,-0.24985371776699,-0.196145597278685,-0.121996511240133,-0.168345313897088,0.355874926677516,0.0512699217143626,-0.243888057210716,-0.0465242164131604,0.37113976377907,0.282306266187221,0.312146300718605,0.269874545931569,0.323222148569665,0.254139591707625,0.249194411954388,0.11088029342159,0.290404169763048,0.522133907686362,0.561141554650683,0.41372094344433,0.463354746059887,0.423480563544575,0.332861042636699,0.268155654677355,-0.733201059592651,-0.58935548863532,-0.653943241356295,0.208666414716175,0.275625969905035,0.26497711080082,0.24205865245439,0.177630530489393,0.178298537773369,0.0460562744112229,0.16312647033784,0.153231816504052,0.12232365238917,0.0812955870337316,0.092179539060754,0.00979814986147006,-0.0502719220447161,0.0626555698143694,-0.313714153046382,-0.089480793329237,-0.543771760737765,-0.275784056276952,0.441467687024608,0.424483250278586,0.296967738048673,0.179456681224126,0.107243303240215,0.0704766845265232,-0.195761430764109,0.0559006766319075,-0.0516859124333639,0.0878525238252195,0.0641506913966404,-0.270841016636805,-0.195357501153127,-0.159258304219116,0.214628737371954,0.194905446243579,0.238015547047921,0.145516398846677,0.193655843131161,0.220926953545714,0.167349710697608,-0.00636755737306696,-0.0331581905776089,-0.00909989466621597,-0.32881932821569,-0.11610566649934,-0.134316132053029,-0.282872223055269,-0.249088678240781,-0.267943972143318,-0.289544307028773,-0.183675509519291,-0.199583703139128,-0.333651241500524,0.0404305122160068,-0.0179304067883257,-0.050840380052808,-0.122990329817027,-0.284956975112604,-0.140324197996758,-0.0485355664921925,0.256207335011495,0.193451068800353,0.174105759541756,0.115072391676151,0.0504651612067892,0.133546272309154,0.173146050168293,0.144210305063333,0.15735565801934,0.225121532851063,-0.0073084582523419,-0.00616768446030752,-0.0093209556232446,-0.609495540953867,-0.566268380027468,-0.2146037017358,-0.116854744462317,-0.170757292625373,-0.141219487809241,0.177932394806923,0.00484978039177332,0.656066318447334,0.623844380607215,0.73456216303271,0.709199820436989,0.635996418897219,0.683940460575546,0.728239349497151,0.671336644739036,0.706725660706676,-0.105610598681088,0.126116362686092,0.197747178320775,0.353396606124203,0.212123640420181,-0.131774615452458,0.05373606046807,0.0275218902993989,-0.173448766834522,-0.00217202721029846,-0.0011861720605355,0.0947159172863282,0.0240169827035075,0.0254800771876325,-0.0520670849363304,-0.297595015089218,-0.101870484086703,0.122990051608891,0.44353075480878,0.348133576045322,0.326601311233195,0.303178327535832,0.367567809413462,0.306380331183797,0.238281390924313,-0.293210378888077,-0.298736720675118,-0.202349805232117,0.159368103631828,0.226350541767262,0.191229991994684,0.104777025539408,0.0873600857376129,-0.0980473334213663,-0.182844870360531,-0.50524476380489,0.174002944110894,-0.047791962584602,-0.391764154043929,-0.48782795253264,-0.427991186461807,-0.325469039888133,-0.322100373505293,-0.296345812710581,-0.175881606386882,0.361817540978336,0.322085262924437,0.203368326783331,0.188179830375467,0.162113337755249,0.153624683576838,0.173005170773646,-0.0385514650904949,-0.0995750823490136,-0.0334297851405783,-0.626253060315582,0.28776282554681,0.230593648731821,0.386503833154103,0.349013593771174,0.355971126288001,0.415046777561765,0.198023894510495,-0.0358474432314028,-0.388875570326851,-0.321177671500941,-0.397494608312912,0.176056894198661,0.0550731495214859,-0.133475752979711,-0.150188599286927,-0.208010978864728,-0.298230335375212,-0.334105501844179,-0.357852678236463,-0.398402450521925,-0.436835370923653,-0.449259339215937,-0.433295695370058,-0.468630002727819,-0.074893867188774,-0.344254206748444,-0.477584933841144,-0.500460130338251,0.171181487011938,0.0159361952020911,0.111827510580671,-0.0383484110504527,-0.147764691798367,-0.15331616456559,-0.26529106312667,-0.241685613874928,-0.19505626870253,-0.280026508191827,-0.375616023645948,-0.347881402549031,-0.28009807807681,-0.281032097281128,-0.268445359308627,0.143766484303701,0.52546721825424,0.379927960185153,0.307566298891418,0.108188179701717,0.109125709136516,0.161622907935747,0.219012136908716,0.120278019453647,0.171638808712206,0.164287284815195,0.193393137256669,0.190623159714893,0.212275206081313,0.223672724308283,0.235886593670256,0.195440068831616,0.143521792241698,0.217877171420413,0.166915570989829,0.178852470766602,0.130332180265148,0.176734273138823,0.154445226519792,0.180738277493802,0.124938123139109,0.191290246886447,0.171558237761215,0.180289502888766,0.0225146819757223,0.195909974777914,0.189533153857794,0.142743398563585,0.194815468588133,0.192206935253368,0.296990172419334,0.197347544796058,0.205792221189865,0.262809264386212,0.24068563300296,0.108819119447266
|coexpression_dpi_cluster_scores_mean=0.111349957755186,-0.519077070725277,-0.48328232938228,-0.512722611981812,-0.454683783067199,-0.458724562884919,-0.432108707902008,-0.652106334461255,-0.563305554327245,-0.578382558400693,-0.648427399690435,-0.664165805320121,-0.637737717674699,-0.611524929703433,-0.591278247033921,-0.600923274116146,-0.733201059592651,-0.594055825577168,-0.611851879164578,-0.633389377841358,-0.128580248454128,-0.500646072166785,-0.487852779164851,-0.539135320116755,-0.496059069191307,-0.562727686650889,-0.535771935742334,-0.497838023503444,-0.527149366927912,-0.511840149374599,-0.586137375247114,-0.656007744016067,-0.698502734835838,-0.733201059592651,-0.479292670553873,-0.506805560814009,-0.516554524961712,-0.614071850633652,-0.630624410778792,-0.681346406649765,-0.607147643704947,-0.606196578268341,-0.634448269226903,0.1932457009661,0.183760192520486,0.159819623335784,0.351964358998535,0.323254580745532,0.210113196634878,0.228970734868707,0.21763456524539,0.22633953587474,-0.590232367519015,-0.649552340973579,-0.582163453856384,0.157075133707785,0.351097371294636,0.351375710226196,0.225497509127166,0.171110483811972,0.171077447346275,0.258154107711806,0.187029444376954,-0.376040251856806,-0.40197104118601,-0.324567293127769,0.180454040262185,0.0674658287527794,-0.00875692448010048,-0.039027047688183,-0.0776354858352503,-0.0507399577907791,-0.00387573272382258,0.0177178577438203,0.0900171434029418,-0.00463856994161253,-0.262228810453892,-0.14919879931628,-0.207458635454139,0.125394235183787,0.0538843200092595,0.15367369204499,-0.210485692856163,-0.102370039529235,-0.128017059817981,0.118890333338224,0.107330924240964,0.107658243026652,-0.0652835484680565,-0.0268637898711144,-0.048594951314259,-0.165067856115272,-0.167356088752264,-0.275721549853375,-0.322280807601797,-0.269440362798128,-0.0763202293187717,-0.00772778183204,-0.021948189362732,-0.00494573297251949,0.263498979603803,0.484385540383309,0.690898098326029,0.775709997554393,-0.123315865330662,-0.107953255238666,-0.265321850996986,-0.145543175115465,-0.52584195107235,0.0102097886173377,0.227755825125933,0.0814508498285785,0.109199322131435,3.88827914253216e-05,0.216219494264025,0.0814356103433676,-0.0411801439092608,0.247552749324761,-0.311720323599376,0.283250090601141,-0.0417476071446075,-0.0700375391951784,-0.392277077472969,-0.242540318908087,-0.207242963154205,-0.333608190482117,-0.507923553712678,-0.588735008285788,-0.535671657877633,-0.0719542989203497,-0.304811714999768,-0.0675270022230836,-0.24985371776699,-0.196145597278685,-0.121996511240133,-0.168345313897088,0.355874926677516,0.0512699217143626,-0.243888057210716,-0.0465242164131604,0.37113976377907,0.282306266187221,0.312146300718605,0.269874545931569,0.323222148569665,0.254139591707625,0.249194411954388,0.11088029342159,0.290404169763048,0.522133907686362,0.561141554650683,0.41372094344433,0.463354746059887,0.423480563544575,0.332861042636699,0.268155654677355,-0.733201059592651,-0.58935548863532,-0.653943241356295,0.208666414716175,0.275625969905035,0.26497711080082,0.24205865245439,0.177630530489393,0.178298537773369,0.0460562744112229,0.16312647033784,0.153231816504052,0.12232365238917,0.0812955870337316,0.092179539060754,0.00979814986147006,-0.0502719220447161,0.0626555698143694,-0.313714153046382,-0.089480793329237,-0.543771760737765,-0.275784056276952,0.441467687024608,0.424483250278586,0.296967738048673,0.179456681224126,0.107243303240215,0.0704766845265232,-0.195761430764109,0.0559006766319075,-0.0516859124333639,0.0878525238252195,0.0641506913966404,-0.270841016636805,-0.195357501153127,-0.159258304219116,0.214628737371954,0.194905446243579,0.238015547047921,0.145516398846677,0.193655843131161,0.220926953545714,0.167349710697608,-0.00636755737306696,-0.0331581905776089,-0.00909989466621597,-0.32881932821569,-0.11610566649934,-0.134316132053029,-0.282872223055269,-0.249088678240781,-0.267943972143318,-0.289544307028773,-0.183675509519291,-0.199583703139128,-0.333651241500524,0.0404305122160068,-0.0179304067883257,-0.050840380052808,-0.122990329817027,-0.284956975112604,-0.140324197996758,-0.0485355664921925,0.256207335011495,0.193451068800353,0.174105759541756,0.115072391676151,0.0504651612067892,0.133546272309154,0.173146050168293,0.144210305063333,0.15735565801934,0.225121532851063,-0.0073084582523419,-0.00616768446030752,-0.0093209556232446,-0.609495540953867,-0.566268380027468,-0.2146037017358,-0.116854744462317,-0.170757292625373,-0.141219487809241,0.177932394806923,0.00484978039177332,0.656066318447334,0.623844380607215,0.73456216303271,0.709199820436989,0.635996418897219,0.683940460575546,0.728239349497151,0.671336644739036,0.706725660706676,-0.105610598681088,0.126116362686092,0.197747178320775,0.353396606124203,0.212123640420181,-0.131774615452458,0.05373606046807,0.0275218902993989,-0.173448766834522,-0.00217202721029846,-0.0011861720605355,0.0947159172863282,0.0240169827035075,0.0254800771876325,-0.0520670849363304,-0.297595015089218,-0.101870484086703,0.122990051608891,0.44353075480878,0.348133576045322,0.326601311233195,0.303178327535832,0.367567809413462,0.306380331183797,0.238281390924313,-0.293210378888077,-0.298736720675118,-0.202349805232117,0.159368103631828,0.226350541767262,0.191229991994684,0.104777025539408,0.0873600857376129,-0.0980473334213663,-0.182844870360531,-0.50524476380489,0.174002944110894,-0.047791962584602,-0.391764154043929,-0.48782795253264,-0.427991186461807,-0.325469039888133,-0.322100373505293,-0.296345812710581,-0.175881606386882,0.361817540978336,0.322085262924437,0.203368326783331,0.188179830375467,0.162113337755249,0.153624683576838,0.173005170773646,-0.0385514650904949,-0.0995750823490136,-0.0334297851405783,-0.626253060315582,0.28776282554681,0.230593648731821,0.386503833154103,0.349013593771174,0.355971126288001,0.415046777561765,0.198023894510495,-0.0358474432314028,-0.388875570326851,-0.321177671500941,-0.397494608312912,0.176056894198661,0.0550731495214859,-0.133475752979711,-0.150188599286927,-0.208010978864728,-0.298230335375212,-0.334105501844179,-0.357852678236463,-0.398402450521925,-0.436835370923653,-0.449259339215937,-0.433295695370058,-0.468630002727819,-0.074893867188774,-0.344254206748444,-0.477584933841144,-0.500460130338251,0.171181487011938,0.0159361952020911,0.111827510580671,-0.0383484110504527,-0.147764691798367,-0.15331616456559,-0.26529106312667,-0.241685613874928,-0.19505626870253,-0.280026508191827,-0.375616023645948,-0.347881402549031,-0.28009807807681,-0.281032097281128,-0.268445359308627,0.143766484303701,0.52546721825424,0.379927960185153,0.307566298891418,0.108188179701717,0.109125709136516,0.161622907935747,0.219012136908716,0.120278019453647,0.171638808712206,0.164287284815195,0.193393137256669,0.190623159714893,0.212275206081313,0.223672724308283,0.235886593670256,0.195440068831616,0.143521792241698,0.217877171420413,0.166915570989829,0.178852470766602,0.130332180265148,0.176734273138823,0.154445226519792,0.180738277493802,0.124938123139109,0.191290246886447,0.171558237761215,0.180289502888766,0.0225146819757223,0.195909974777914,0.189533153857794,0.142743398563585,0.194815468588133,0.192206935253368,0.296990172419334,0.197347544796058,0.205792221189865,0.262809264386212,0.24068563300296,0.108819119447266
|coexpression_dpi_cluster_scores_median=0.181402026669751,-0.527785688464637,-0.413028951833766,-0.423748571315348,-0.367772506363019,-0.47071848055689,-0.446038575596216,-0.592787704655714,-0.592787704655714,-0.592787704655714,-0.592787704655714,-0.61310327659469,-0.592787704655714,-0.592787704655714,-0.613151882886388,-0.611074793205427,-0.82020903941228,-0.592787704655714,-0.592787704655714,-0.592787704655714,-0.132854333994919,-0.470328505604544,-0.427557084570342,-0.507471854265461,-0.462658398145524,-0.453134783766653,-0.535700032832858,-0.453049146786774,-0.425637009264142,-0.582001733626213,-0.590931821414552,-0.592787704655714,-0.716114065141841,-0.82020903941228,-0.312671045526697,-0.367772506363019,-0.367772506363019,-0.592787704655714,-0.592787704655714,-0.664645080583621,-0.592787704655714,-0.592787704655714,-0.592787704655714,0.163387848955505,0.227853769028067,0.135806446720493,0.288804639483469,0.339307735384271,0.172306562565628,0.236869685341894,0.245314615108395,0.219953371171786,-0.592787704655714,-0.592787704655714,-0.592787704655714,0.138987289033597,0.248590582984349,0.39364017430079,0.166799072487431,0.0859331654522314,0.136822349232311,0.212334164676414,0.173911221272241,-0.399754105347023,-0.361217561246222,-0.302919656462461,0.247656566237399,0.0671494581875633,-0.0789415314141045,-0.12375971096923,-0.228721546964563,-0.00620254633859125,-0.00139908166543375,-0.00368915237115415,0.0659752361931066,0.0153678452862054,-0.263944913533137,-0.159286964560923,-0.278594737388585,0.159275148031995,0.0685720916765936,0.254712113656482,-0.217971435091058,-0.111158783082351,-0.117156002855359,0.168876128835076,0.173985257425748,0.041154425478696,-0.0047982751197109,0.0805976531395132,-0.0996829023171846,-0.139150116826896,-0.309929064621872,-0.367772506363019,-0.367772506363019,-0.418433537985196,-0.141126386429392,0.149127863193108,0.17655482947642,0.16075233743228,0.236530109706214,0.398199525257788,0.745403792171324,0.867729898563125,-0.153938293055456,-0.0930370640394282,-0.216537480356042,-0.205500774464684,-0.529233132995918,-0.0715542552890471,0.178331313249678,0.0527899748825823,0.158988621602237,0.0224009377920423,0.185459500410991,0.0860445027461231,-0.0541972931456389,0.167869136604461,-0.331302644345901,0.286235514078576,-0.0362325010007355,-0.0299216673999321,-0.411734865507343,-0.212180946931003,-0.17001938601899,-0.305620893970061,-0.553010214968466,-0.568587561971612,-0.58139323493059,-0.0269769077090403,-0.318510883546203,-0.125609350480834,-0.253006066267071,-0.251949426435261,-0.0908519084578857,-0.167429439739475,0.360402155951391,0.054690412280812,-0.281500972278389,-0.138648814846628,0.352821883896917,0.290009628561505,0.292968032978053,0.306349836450356,0.364164323892945,0.288388045751886,0.241963316643979,0.0916616470326854,0.308993209957483,0.539114752773648,0.547581294810762,0.388989600281018,0.460871948731419,0.400510357806447,0.33956155517627,0.292964648836049,-0.82020903941228,-0.592787704655714,-0.592787704655714,0.206633565671887,0.245587100363263,0.301351898024524,0.237628989846514,0.212420905674416,0.186217347232629,0.0816525285526896,0.166674715275005,0.123164062476392,0.105673324060345,0.0874882312400209,0.072922006195339,-0.0224569720067952,-0.0186693371244514,0.0776836993732796,-0.295303683988771,-0.0552298908150419,-0.560470772112497,-0.250937321320721,0.398963972982595,0.457906340186032,0.25394727822345,0.186002785608549,0.079342374824815,0.0940283714529868,-0.175583857071827,0.103240933204586,-0.0199331732152812,0.108202676163724,0.0592726989267855,-0.40693228526225,-0.184017304491248,-0.166622386139209,0.228451136057575,0.202933309874463,0.262519255699483,0.138172953621322,0.169564731733682,0.184924856417274,0.184444828801675,-0.0575557306356019,-0.0794344905438983,-0.0268764661372203,-0.367772506363019,-0.110686256861901,-0.0942428432119287,-0.243973161031542,-0.229076421475174,-0.26870228345421,-0.284824906855291,-0.270803742488258,-0.223717679384507,-0.381380507840561,-0.0273362407620711,0.0263119950037694,-0.123932831106729,-0.239976912327142,-0.331942420856468,-0.135614633765741,-0.0940633229819464,0.203997614467308,0.175350481681696,0.124350173312234,0.0430665942777525,0.108209660293203,0.108059397300601,0.239185829236588,0.188893242118083,0.178513779897143,0.302433005019723,0.0078655996742559,-0.0170468603464926,0.0250429596920712,-0.592787704655714,-0.510788722894872,-0.281280906468969,-0.0753102001536808,-0.138112308862653,-0.169342225861908,0.282612459987666,0.0533830895768615,0.65192234025622,0.602921172714862,0.767325649673865,0.7166780977098,0.638544506702837,0.705178235612635,0.775942906028706,0.673444501662883,0.70590035376735,-0.0535433907543922,0.118158314489385,0.24618564491339,0.312869573939114,0.229453716442881,-0.184332197334778,0.0574119547903211,0.0441642152851718,-0.169819139177967,0.0357979379781005,0.00471228892321022,0.0739937864729028,0.0482153415770433,0.00365204802013413,-0.0257704241697921,-0.200848714669642,-0.0599865864736475,0.0789335160676902,0.406008592986948,0.371382856022028,0.304549093005538,0.251135782419995,0.412857398713332,0.331056858772906,0.258528922826198,-0.314332226947706,-0.244634047015786,-0.200654354653925,0.0160508199577166,0.22394970939381,0.191836647118741,0.0431166849252111,0.0100774690116957,-0.0594530036657552,-0.17879061595977,-0.428452355865042,0.0824834944423623,-0.0171861328331446,-0.343388684112161,-0.468782501995315,-0.366545187514947,-0.367772506363019,-0.367772506363019,-0.367772506363019,-0.311017236517143,0.329668158415618,0.33273439337891,0.18447940322198,0.258128403524685,0.125096448229269,0.14115103753842,0.135319764352791,-0.0406435768264133,-0.0625650395298402,-0.0317971663622677,-0.592787704655714,0.253531920210951,0.223517424663475,0.40486366851379,0.362596744532764,0.2816628203171,0.371849690786204,0.223799788315854,-0.0354606175547372,-0.374054640326786,-0.320347057246103,-0.394934441532701,0.18874626260531,0.0169079477565671,-0.158843087752598,-0.164354558712015,-0.214150491446105,-0.334198824397076,-0.363870626391856,-0.346771872305122,-0.406864926815216,-0.498446643454865,-0.447424882637126,-0.461029821682291,-0.50514816125831,-0.126100458614814,-0.213560013779367,-0.38167492164965,-0.473546456089564,0.172234388359955,-0.0437698500127704,0.107614400022975,-0.0660987101052714,-0.136181499324118,-0.219163730723959,-0.408741467134183,-0.300947749803772,-0.315992334467769,-0.34325640755124,-0.435595080685632,-0.337951673222802,-0.336833749849773,-0.290831725841438,-0.320004340224126,0.192458801653638,0.551183798382721,0.419984413760144,0.315605908380877,0.139540754167056,0.109407651559829,0.11866034410416,0.151851307703527,0.111241858825449,0.146940582972524,0.171494873119566,0.16619344227958,0.142473068089827,0.16501882275947,0.189555059133728,0.218693412524903,0.184395110962901,0.166352494795061,0.194234757945473,0.206095346091038,0.124759447083181,0.118896937948254,0.189980940615069,0.101858762269729,0.202247813416768,0.131939941804894,0.19873692991856,0.163787876824121,0.214829415272478,-0.0139942496768057,0.18712758888128,0.220897257819889,0.129591497650982,0.182117402933453,0.188565228871811,0.30468455852376,0.195246725925689,0.204162132035109,0.286799644070676,0.216834977844332,0.0611911625189191
|gostat_on_MCL_coexpression=GO:0001885;endothelial cell development;0.03204601427747;22344!GO:0031290;retinal ganglion cell axon guidance;0.0355930276672246;13640!GO:0045446;endothelial cell differentiation;0.0355930276672246;22344!GO:0007588;excretion;0.0400311858728939;170643!
|gostat_on_MCL_coexpression=GO:0001885;endothelial cell development;0.03204601427747;22344!GO:0031290;retinal ganglion cell axon guidance;0.0355930276672246;13640!GO:0045446;endothelial cell differentiation;0.0355930276672246;22344!GO:0007588;excretion;0.0400311858728939;170643!
}}
}}

Revision as of 12:55, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr11:87881569..87881633,+p2@Vezf1
Mm9::chr14:52604532..52604583,+p1@Arhgef40
Mm9::chr17:63231026..63231078,-p1@Efna5
Mm9::chr17:63232012..63232041,-p@chr17:63232012..63232041
-
Mm9::chr18:9212152..9212169,+p@chr18:9212152..9212169
+
Mm9::chr3:86978440..86978500,-p1@Kirrel


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0001885endothelial cell development0.03204601427747
GO:0031290retinal ganglion cell axon guidance0.0355930276672246
GO:0045446endothelial cell differentiation0.0355930276672246
GO:0007588excretion0.0400311858728939



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1307&oldid=2150593"