FFCP PHASE1:Mm9::chr19:7557731..7557769,-: Difference between revisions
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|id=chr19:7557731..7557769,- | |id=chr19:7557731..7557769,- | ||
|ontology_enrichment_celltype=CL:0000117!8.02e-13!23;CL:0000337!8.02e-13!23;CL:0000221!9.23e-09!44;CL:0000133!9.23e-09!44;CL:0002319!1.27e-08!43;CL:0000540!1.80e-08!33;CL:0000047!1.80e-08!33;CL:0000031!1.80e-08!33;CL:0000404!1.80e-08!33 | |ontology_enrichment_celltype=CL:0000117!8.02e-13!23;CL:0000337!8.02e-13!23;CL:0000221!9.23e-09!44;CL:0000133!9.23e-09!44;CL:0002319!1.27e-08!43;CL:0000540!1.80e-08!33;CL:0000047!1.80e-08!33;CL:0000031!1.80e-08!33;CL:0000404!1.80e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-13,23;CL:0000337,8.02e-13,23;CL:0000221,9.23e-09,44;CL:0000133,9.23e-09,44;CL:0002319,1.27e-08,43;CL:0000540,1.80e-08,33;CL:0000047,1.80e-08,33;CL:0000031,1.80e-08,33;CL:0000404,1.80e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.32e-26!73;UBERON:0005743!4.32e-26!73;UBERON:0001049!1.11e-24!52;UBERON:0005068!1.11e-24!52;UBERON:0006241!1.11e-24!52;UBERON:0007135!1.11e-24!52;UBERON:0000073!6.87e-24!75;UBERON:0001016!6.87e-24!75;UBERON:0000955!1.14e-23!50;UBERON:0006238!1.14e-23!50;UBERON:0002616!4.06e-23!49;UBERON:0000033!1.50e-22!63;UBERON:0002346!3.02e-19!71;UBERON:0003075!3.02e-19!71;UBERON:0007284!3.02e-19!71;UBERON:0003056!7.89e-19!49;UBERON:0002020!1.92e-18!34;UBERON:0003080!2.74e-18!40;UBERON:0004121!6.11e-18!102;UBERON:0000924!6.11e-18!102;UBERON:0006601!6.11e-18!102;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0007811!3.37e-17!86;UBERON:0002791!1.22e-15!29;UBERON:0003528!1.22e-15!29;UBERON:0001893!1.22e-15!29;UBERON:0000153!2.75e-14!94;UBERON:0000025!8.20e-14!114;UBERON:0004111!7.63e-13!122;UBERON:0000956!2.29e-11!21;UBERON:0001869!2.29e-11!21;UBERON:0000203!2.29e-11!21;UBERON:0000477!8.22e-11!154;UBERON:0000475!3.50e-10!200;UBERON:0002619!1.19e-09!17;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0000483!3.52e-07!181;UBERON:0000119!4.18e-07!183;UBERON:0003076!5.57e-07!12;UBERON:0003057!5.57e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!4.32e-26!73;UBERON:0005743!4.32e-26!73;UBERON:0001049!1.11e-24!52;UBERON:0005068!1.11e-24!52;UBERON:0006241!1.11e-24!52;UBERON:0007135!1.11e-24!52;UBERON:0000073!6.87e-24!75;UBERON:0001016!6.87e-24!75;UBERON:0000955!1.14e-23!50;UBERON:0006238!1.14e-23!50;UBERON:0002616!4.06e-23!49;UBERON:0000033!1.50e-22!63;UBERON:0002346!3.02e-19!71;UBERON:0003075!3.02e-19!71;UBERON:0007284!3.02e-19!71;UBERON:0003056!7.89e-19!49;UBERON:0002020!1.92e-18!34;UBERON:0003080!2.74e-18!40;UBERON:0004121!6.11e-18!102;UBERON:0000924!6.11e-18!102;UBERON:0006601!6.11e-18!102;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0007811!3.37e-17!86;UBERON:0002791!1.22e-15!29;UBERON:0003528!1.22e-15!29;UBERON:0001893!1.22e-15!29;UBERON:0000153!2.75e-14!94;UBERON:0000025!8.20e-14!114;UBERON:0004111!7.63e-13!122;UBERON:0000956!2.29e-11!21;UBERON:0001869!2.29e-11!21;UBERON:0000203!2.29e-11!21;UBERON:0000477!8.22e-11!154;UBERON:0000475!3.50e-10!200;UBERON:0002619!1.19e-09!17;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0000483!3.52e-07!181;UBERON:0000119!4.18e-07!183;UBERON:0003076!5.57e-07!12;UBERON:0003057!5.57e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-26,54;UBERON:0001017,4.32e-26,73;UBERON:0002346,5.42e-25,64;UBERON:0003075,5.42e-25,64;UBERON:0007284,5.42e-25,64;UBERON:0001049,1.11e-24,52;UBERON:0005068,1.11e-24,52;UBERON:0006241,1.11e-24,52;UBERON:0007135,1.11e-24,52;UBERON:0001016,6.87e-24,75;UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0010371,1.09e-21,73;UBERON:0000955,1.67e-21,47;UBERON:0006238,1.67e-21,47;UBERON:0002616,5.78e-21,46;UBERON:0003056,7.89e-19,49;UBERON:0002020,1.92e-18,34;UBERON:0003080,2.74e-18,40;UBERON:0002780,1.27e-17,39;UBERON:0001890,1.27e-17,39;UBERON:0006240,1.27e-17,39;UBERON:0003528,1.22e-15,29;UBERON:0002791,1.22e-15,29;UBERON:0001893,1.22e-15,29;UBERON:0000025,8.20e-14,114;UBERON:0010314,1.41e-13,92;UBERON:0004111,7.63e-13,122;UBERON:0000956,2.29e-11,21;UBERON:0001869,2.29e-11,21;UBERON:0000203,2.29e-11,21;UBERON:0002619,1.19e-09,17;UBERON:0000483,5.40e-09,174;UBERON:0000119,6.67e-09,176;UBERON:0002021,6.22e-08,10;UBERON:0000411,6.22e-08,10;UBERON:0001950,6.22e-08,10;UBERON:0003076,5.57e-07,12;UBERON:0003057,5.57e-07,12 | |||
|phase1_expression=62.6181992179744,36.9913932097723,31.394947517878,21.4749590027849,30.0537437967808,26.6928042339905,34.5746708081378,64.5616617207881,28.298533152485,35.577808000943,13.8686554262659,18.1880522509367,63.0018686146837,65.4778814118291,80.945672121206,66.8168382386426,74.8531209597117,74.7645331899023,72.1221920766186,67.4779546358868,135.559004500805,90.5533474952074,94.5543236682946,59.0372040107671,60.1052316395985,33.3054539186712,30.1533397311352,35.5527533931717,52.8265106088719,50.910086211506,59.645507366277,24.7661962649256,27.6779154413057,47.5445043046316,37.839562187417,45.0495888921514,33.4837744270285,387.978821693113,266.435352482616,315.6848176162,392.938634004718,351.7684247536,366.07480618549,58.2902267226923,54.9462967209769,42.5828465015101,101.710874765245,138.227949145203,85.8972974491785,121.907546719576,134.526951181973,165.315449019717,88.2536507863693,65.282592781021,83.3512621873311,45.5349201783626,59.3124220673226,53.629897596854,265.843829569511,386.692405847856,313.112713332053,62.3473939007203,110.272554717781,120.586562115707,132.508092583975,96.6252956326696,145.306053601426,136.01328008383,166.110758918181,179.017874227822,178.986542110026,530.453878037863,496.070742977324,192.433045566693,181.339631166503,255.542822677586,1030.68464615428,598.470553605275,709.815790177101,354.642227706491,351.95296493847,313.589849075169,661.384524634271,502.54701075829,556.491218403142,525.617396485023,450.606369729161,302.899099466113,21.0518817466252,50.9352315119734,43.7695377939533,60.229671388697,69.3570760381906,119.274405351958,151.397905265307,118.727125080794,92.5528728668245,28.8027245156918,23.6405264188611,31.4472221314203,106.618468770947,19.2489716121477,7.64415719119937,14.2213340630666,30.7417278235924,34.7103015700885,32.3535644809461,86.3230130676093,97.1017063676894,59.3768556259299,68.3532187458575,63.3288194889254,70.5683421603539,53.506537396181,65.1441437531805,38.0769771728917,72.6753205139059,93.8449826410227,168.960615422426,49.1771223840124,71.3318104627071,73.7010384765538,50.325775528893,308.883740847182,221.594615808635,61.3096932500619,110.469544794458,79.1871604911298,113.854923457466,650.091375016931,457.043102215808,231.455316591896,646.974119755653,588.912698231751,572.248274717028,513.00687382025,72.8151451529761,93.4296349281799,215.067067427057,200.340646803923,71.566243629487,78.3966176118143,99.9344820419688,99.4651797715719,139.542859759373,129.010516326844,123.124066071484,199.71900221052,93.3409409399207,70.3474618224288,66.6854760581366,68.6082642498309,69.5118123063995,57.1133553096353,50.0050591471303,57.321868843726,127.100586903696,137.423782399258,132.420190718346,105.219892448035,101.784310031796,88.4104721773583,109.139323104782,100.940050886418,92.7145348453143,86.7351613919021,82.8964810324823,80.1010248638783,78.4950484087302,81.098727255073,69.7191762094359,69.5911940144582,70.2560368931362,73.1424982244026,525.30429151319,252.116300329247,48.2411423156345,62.67478429926,73.5844464346557,72.6900782923173,73.196718030949,88.7407508342707,84.058900573361,89.7864955251279,59.7906617546085,75.102723354149,69.8711880464749,80.5773711766661,68.4323945788112,65.6138168317582,58.1411354162927,54.9629914182053,88.5749097450891,73.5760421206654,99.1828073923108,82.8860904330429,80.8781871488999,89.0724912607046,119.137635942101,137.12982747305,137.530885589044,143.26410731321,82.4138303302274,104.611881283991,116.166366111903,112.880780417197,119.890331740605,111.665024965369,99.0494563429723,111.050709056013,87.228752004969,86.7614065674338,100.637744569148,103.827324399512,86.4344354527333,88.6551861594362,96.5158084747888,91.6642690590398,118.796301277127,70.8697880021613,79.8528384565927,71.292936025579,77.4477819352057,85.5956975527678,92.5989763046593,71.6140487638122,86.2264238260865,87.9214817905636,80.843567709346,91.1080029819503,83.0614762774958,97.6381145425203,91.9826832029561,112.044570866654,193.7551235695,108.995014790369,678.486793288409,589.340360185598,16.2295595922909,46.9595924600134,82.9786617064755,90.9722274211168,114.389824196116,63.5657002553788,59.4872459799992,61.9937602427543,79.3428975282793,97.6134565423782,99.6125200425239,349.597592266926,69.6925818372599,82.8005057052737,66.2949924569055,72.4218839849431,100.886305138372,91.042738558118,91.3017142033548,93.3595144791696,101.288549258105,81.1628790571968,59.6969357218591,76.3420831902762,74.5079520824068,71.7403440514302,84.334886859999,85.6025008959951,124.260456100133,90.2106081096864,103.098870974855,109.740561936175,118.463276073039,117.723419617367,125.550902719418,111.434171375943,52.5664626062711,81.3435152117069,128.568056066043,45.013947053024,56.1896204901751,65.4998364719773,87.3805558102959,84.5325633687065,59.4620906724896,690.152974083117,104.572979048286,69.7587613715692,82.5967592068914,96.0679130723924,106.074720711516,87.3932621648917,89.5786326067617,102.724366005565,91.626582632333,82.1016731492998,87.1505662316028,74.21160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| ||
|short_description=p1@Rtn3 | |short_description=p1@Rtn3 | ||
}} | }} |
Revision as of 12:00, 13 November 2012
Short description: | p1@Rtn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rtn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 1bp_to_ENSMUST00000025667, NM_053076_5end |
EntrezGene: | Rtn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.02e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.02e-13 | 23 |
ectodermal cell | 9.23e-09 | 44 |
neurectodermal cell | 9.23e-09 | 44 |
neural cell | 1.27e-08 | 43 |
neuron | 1.80e-08 | 33 |
neuronal stem cell | 1.80e-08 | 33 |
neuroblast | 1.80e-08 | 33 |
electrically signaling cell | 1.80e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.