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FFCP PHASE1:Mm9::chr3:95330741..95330793,+: Difference between revisions

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|id=chr3:95330741..95330793,+
|id=chr3:95330741..95330793,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!4.53e-11!51;UBERON:0002405!1.41e-09!70;UBERON:0002371!2.31e-09!16;UBERON:0002193!3.77e-09!48;UBERON:0002390!6.96e-08!45;UBERON:0003061!6.96e-08!45;UBERON:0001474!8.48e-08!22;UBERON:0004765!8.48e-08!22;UBERON:0001434!8.48e-08!22;UBERON:0001007!6.61e-07!128;UBERON:0001555!6.61e-07!128;UBERON:0007026!6.61e-07!128;UBERON:0004119!9.86e-07!130;UBERON:0000925!9.86e-07!130;UBERON:0006595!9.86e-07!130
|ontology_enrichment_uberon=UBERON:0007023!4.53e-11!51;UBERON:0002405!1.41e-09!70;UBERON:0002371!2.31e-09!16;UBERON:0002193!3.77e-09!48;UBERON:0002390!6.96e-08!45;UBERON:0003061!6.96e-08!45;UBERON:0001474!8.48e-08!22;UBERON:0004765!8.48e-08!22;UBERON:0001434!8.48e-08!22;UBERON:0001007!6.61e-07!128;UBERON:0001555!6.61e-07!128;UBERON:0007026!6.61e-07!128;UBERON:0004119!9.86e-07!130;UBERON:0000925!9.86e-07!130;UBERON:0006595!9.86e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.39e-11,51;UBERON:0002371,2.29e-09,16;UBERON:0002193,3.49e-09,48;UBERON:0002405,3.49e-09,48;UBERON:0002390,6.47e-08,45;UBERON:0003061,6.47e-08,45;UBERON:0001007,8.77e-08,116;UBERON:0001555,8.77e-08,116;UBERON:0007026,8.77e-08,116;UBERON:0001474,9.89e-08,22;UBERON:0004765,9.89e-08,22;UBERON:0001434,9.89e-08,22;UBERON:0004119,1.41e-07,118;UBERON:0000925,1.41e-07,118;UBERON:0006595,1.41e-07,118;UBERON:0004921,3.55e-07,114;UBERON:0005409,6.84e-07,47
|phase1_expression=14.5735450865363,47.4606554389531,52.7799117691862,37.2030979907401,39.0698669358151,11.7515490338323,15.8856595604957,122.667157269497,40.6879407018317,26.4492914743853,13.1837835533639,6.30200056063158,128.058145988542,91.3543205278523,122.251282586348,162.79011498142,118.925519281785,491.647784710813,470.028278400473,463.009110111651,47.9644156452034,26.4113930194355,36.306770690312,101.115211205433,111.492910598645,60.8685881961921,50.3991535506118,39.8621780468895,190.403466295287,118.706191116927,96.0093111137469,0,0,0,21.9527231010969,22.9403810594719,25.3170001765338,121.374172913703,438.329128277852,230.350447348471,21.7645650571475,30.7370468231301,107.297788019885,0,0,0,4.69434806608824,0.65407546914134,0,1.94429899074283,5.17949760013841,0,478.180427264549,97.9238891715315,79.9903241959064,16.9791227783725,65.3296243060365,64.9746836269577,5.05791152148994,5.81890077199236,4.43681982454325,0,0,1564.92560835235,2286.25903025484,1642.63002575538,281.923703997819,168.287617730841,3.21437798156281,5.26523159493594,4.41682418837902,19.9955689082663,22.307722636113,4.5321595709533,4.31304619582064,4.5960939330501,67.1706874096271,71.1218473134496,69.8909726315908,3.29715719325485,5.03182039813253,7.8137005583514,74.5418607333687,90.6047802151005,75.7879308972978,21.5078867395777,23.3489556510529,8.76077395378913,14.9937862799704,3.55186332501892,5.79728977403356,109.273832376636,1.3599426674155,2.69851595818909,25.3412802804591,9.85659151614138,47.1893251642686,0,0,0,0.422530259330042,0,0,0,0,0,0,63.2578693643592,461.168370775613,287.532423368566,7.45986905094384,15.8322048722313,15.2206228188999,24.4170677695249,29.6323541981976,27.2696503185396,14.0901131608593,49.3083807096899,126.499308928832,18.9267214438469,39.0889487674897,43.63877278217,188.255678830303,26.0574909340277,17.8029700791437,123.896671776167,70.2116629604693,89.9854096490111,70.651046252624,60.2158370407387,117.120154321568,5.90575454930463,59.2740931855663,55.2345387833514,83.115217823824,61.9761624918834,23.6267324132734,68.2994268649411,61.411630299383,91.9630910223891,10.6698763229417,9.42598628177239,7.56260945182467,9.34369870581433,8.36848939561333,9.35230158079403,8.62055865949505,17.5918292102531,2.37124792226126,4.34943984385984,4.04687585577082,8.11024209982027,11.9560317167007,9.4028084960985,19.1377386859387,6.17006227137329,73.7323846678896,36.5434028102895,35.5204374244491,4.34964122324554,5.62862543954631,9.18316513451176,9.94327889457883,16.9217239302767,13.5755059340893,13.0219009060228,12.3405764643825,17.0477399856067,10.5318303944627,15.595909087514,14.1059728609789,20.3217982521212,41.4949717900086,42.946054003319,65.4001740034436,10.9078889122042,146.705939644806,61.8814325992694,7.25180051819795,9.52170354627798,11.7269389803105,16.9414160683608,29.3539017875229,56.1165597032049,98.7020448012584,135.382540783137,194.784786820209,221.040640437719,209.781357740173,75.5008303269546,117.795237181708,141.191162737346,2.84501851429623,6.62641373136427,5.63538678365402,6.31319116320474,10.0855293327165,7.99548346749632,6.38689024954999,9.29943932271494,15.071877872772,12.4631135561019,77.3741356697459,10.5112416601139,11.2038627214526,16.864658428864,29.2118574799444,34.4883338445956,52.1982996151911,71.9240343627027,91.76853835467,70.836844602525,115.014565221884,142.157842009368,95.4835279730555,53.7993010027348,51.3076602672669,63.6825448199645,168.310156241777,6.253216588426,6.35563408123901,11.712410918488,13.1426539041561,15.7455881995307,37.8489389008762,53.0763522173213,70.6205445595736,65.5535481360374,52.4606188883133,122.405896092656,146.436864622279,163.164138079945,8056.77830087532,4360.49186717459,76.7152265909696,82.505087145115,88.9450268532367,58.254208236325,0,15.9056684138755,0,0.390438744296638,0,1.19484398976276,0,0.283076530788832,0,0.292255857911312,0,48.5195187796929,57.2018543389323,14.4233138970477,10.0989914799217,101.786565874054,17.2568679841952,6.5550771761845,6.34879469625977,10.5618844663303,12.4026795009925,22.1353306519628,52.2025152199807,25.4473610634254,22.4593348382374,22.4386098134429,32.6797686582496,15.470331487228,39.4909942674394,5.58189391497062,8.02023839453078,11.7885369267376,17.3793428969428,16.0531935841863,12.0120785039548,15.5277124048446,13.3762873596315,15.8874053147865,11.9085334949679,34.7909993706523,23.5738062976022,11.5197686612778,13.130957840345,12.3105674808796,122.130470547907,104.579870333927,222.132145037208,79.4589441658407,86.3006497542856,86.8378586791626,108.945299493657,152.595041528751,35.5254918687158,37.5069892227403,35.6555932415413,34.3681422485441,5.21954389408873,7.9294592179471,14.4727156701214,17.1452402731864,32.3176594344343,16.8580432981026,32.3175011886064,29.5784214441953,251.064203266203,91.958218336865,0,3.73791365109947,6.12196414691261,6.80579159204167,13.8201011121172,10.3063236549375,13.0266534896787,7.81226309063701,4.61381115473128,8.69702834973622,11.2331702440568,85.0069914489799,12.9744137785705,19.92592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|phase1_expression=14.5735450865363,47.4606554389531,52.7799117691862,37.2030979907401,39.0698669358151,11.7515490338323,15.8856595604957,122.667157269497,40.6879407018317,26.4492914743853,13.1837835533639,6.30200056063158,128.058145988542,91.3543205278523,122.251282586348,162.79011498142,118.925519281785,491.647784710813,470.028278400473,463.009110111651,47.9644156452034,26.4113930194355,36.306770690312,101.115211205433,111.492910598645,60.8685881961921,50.3991535506118,39.8621780468895,190.403466295287,118.706191116927,96.0093111137469,0,0,0,21.9527231010969,22.9403810594719,25.3170001765338,121.374172913703,438.329128277852,230.350447348471,21.7645650571475,30.7370468231301,107.297788019885,0,0,0,4.69434806608824,0.65407546914134,0,1.94429899074283,5.17949760013841,0,478.180427264549,97.9238891715315,79.9903241959064,16.9791227783725,65.3296243060365,64.9746836269577,5.05791152148994,5.81890077199236,4.43681982454325,0,0,1564.92560835235,2286.25903025484,1642.63002575538,281.923703997819,168.287617730841,3.21437798156281,5.26523159493594,4.41682418837902,19.9955689082663,22.307722636113,4.5321595709533,4.31304619582064,4.5960939330501,67.1706874096271,71.1218473134496,69.8909726315908,3.29715719325485,5.03182039813253,7.8137005583514,74.5418607333687,90.6047802151005,75.7879308972978,21.5078867395777,23.3489556510529,8.76077395378913,14.9937862799704,3.55186332501892,5.79728977403356,109.273832376636,1.3599426674155,2.69851595818909,25.3412802804591,9.85659151614138,47.1893251642686,0,0,0,0.422530259330042,0,0,0,0,0,0,63.2578693643592,461.168370775613,287.532423368566,7.45986905094384,15.8322048722313,15.2206228188999,24.4170677695249,29.6323541981976,27.2696503185396,14.0901131608593,49.3083807096899,126.499308928832,18.9267214438469,39.0889487674897,43.63877278217,188.255678830303,26.0574909340277,17.8029700791437,123.896671776167,70.2116629604693,89.9854096490111,70.651046252624,60.2158370407387,117.120154321568,5.90575454930463,59.2740931855663,55.2345387833514,83.115217823824,61.9761624918834,23.6267324132734,68.2994268649411,61.411630299383,91.9630910223891,10.6698763229417,9.42598628177239,7.56260945182467,9.34369870581433,8.36848939561333,9.35230158079403,8.62055865949505,17.5918292102531,2.37124792226126,4.34943984385984,4.04687585577082,8.11024209982027,11.9560317167007,9.4028084960985,19.1377386859387,6.17006227137329,73.7323846678896,36.5434028102895,35.5204374244491,4.34964122324554,5.62862543954631,9.18316513451176,9.94327889457883,16.9217239302767,13.5755059340893,13.0219009060228,12.3405764643825,17.0477399856067,10.5318303944627,15.595909087514,14.1059728609789,20.3217982521212,41.4949717900086,42.946054003319,65.4001740034436,10.9078889122042,146.705939644806,61.8814325992694,7.25180051819795,9.52170354627798,11.7269389803105,16.9414160683608,29.3539017875229,56.1165597032049,98.7020448012584,135.382540783137,194.784786820209,221.040640437719,209.781357740173,75.5008303269546,117.795237181708,141.191162737346,2.84501851429623,6.62641373136427,5.63538678365402,6.31319116320474,10.0855293327165,7.99548346749632,6.38689024954999,9.29943932271494,15.071877872772,12.4631135561019,77.3741356697459,10.5112416601139,11.2038627214526,16.864658428864,29.2118574799444,34.4883338445956,52.1982996151911,71.9240343627027,91.76853835467,70.836844602525,115.014565221884,142.157842009368,95.4835279730555,53.7993010027348,51.3076602672669,63.6825448199645,168.310156241777,6.253216588426,6.35563408123901,11.712410918488,13.1426539041561,15.7455881995307,37.8489389008762,53.0763522173213,70.6205445595736,65.5535481360374,52.4606188883133,122.405896092656,146.436864622279,163.164138079945,8056.77830087532,4360.49186717459,76.7152265909696,82.505087145115,88.9450268532367,58.254208236325,0,15.9056684138755,0,0.390438744296638,0,1.19484398976276,0,0.283076530788832,0,0.292255857911312,0,48.5195187796929,57.2018543389323,14.4233138970477,10.0989914799217,101.786565874054,17.2568679841952,6.5550771761845,6.34879469625977,10.5618844663303,12.4026795009925,22.1353306519628,52.2025152199807,25.4473610634254,22.4593348382374,22.4386098134429,32.6797686582496,15.470331487228,39.4909942674394,5.58189391497062,8.02023839453078,11.7885369267376,17.3793428969428,16.0531935841863,12.0120785039548,15.5277124048446,13.3762873596315,15.8874053147865,11.9085334949679,34.7909993706523,23.5738062976022,11.5197686612778,13.130957840345,12.3105674808796,122.130470547907,104.579870333927,222.132145037208,79.4589441658407,86.3006497542856,86.8378586791626,108.945299493657,152.595041528751,35.5254918687158,37.5069892227403,35.6555932415413,34.3681422485441,5.21954389408873,7.9294592179471,14.4727156701214,17.1452402731864,32.3176594344343,16.8580432981026,32.3175011886064,29.5784214441953,251.064203266203,91.958218336865,0,3.73791365109947,6.12196414691261,6.80579159204167,13.8201011121172,10.3063236549375,13.0266534896787,7.81226309063701,4.61381115473128,8.69702834973622,11.2331702440568,85.0069914489799,12.9744137785705,19.92592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|short_description=p1@Ctss
|short_description=p1@Ctss
}}
}}

Revision as of 20:27, 13 November 2012

Short description:p1@Ctss
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ctss_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 33bp_to_ENSMUST00000015667, ENSMUST00000116304, NM_021281, uc008qjz.2, uc008qka.2_5end
EntrezGene:Ctss
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ctss

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I547.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I652.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.20
CD326+ enterocyte, pool2.CNhs13197.11849-124I439.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9122.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F226.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4128.06
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E891.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1122.25
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3162.79
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5118.93
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2491.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4470.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6463.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A347.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1101.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2111.49
GP2+ M cell, pool1.CNhs13228.11845-124H960.87
GP2+ M cell, pool2.CNhs13231.11846-124I150.40
GP2+ M cell, pool3.CNhs13240.11847-124I239.86
Ileum epithelium, pool1.CNhs13199.10252-104B9190.40
Ileum epithelium, pool2.CNhs13232.10253-104C1118.71
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C896.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8121.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1438.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3230.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4107.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2478.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I997.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A179.99
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E165.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C564.97
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71564.93
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72286.26
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21642.63
Mouse Microglia, donor1.CNhs12629.11718-123C8281.92
Mouse Microglia, donor2.CNhs12634.11736-123E8168.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D367.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F371.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D769.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E474.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E590.60
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I675.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D914.99
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7109.27
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A747.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B663.26
accessory axillary lymph node, adult.CNhs10475.1063-29H9461.17
adrenal gland, adult.CNhs10508.49-24D7287.53
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F524.42
adrenal gland, neonate N00.CNhs11191.1311-23C129.63
adrenal gland, neonate N25.CNhs11223.1377-27I327.27
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H149.31
bone (os femoris), adult.CNhs10483.56-12G2126.50
bone (os femoris), neonate N02.CNhs11227.1985-43F518.93
bone (os femoris), neonate N16.CNhs11225.1525-43A639.09
bone (os femoris), neonate N20.CNhs11195.1350-25C343.64
cecum, adult.CNhs10467.37-13H4188.26
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I217.80
colon, adult.CNhs10468.36-18H7123.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C770.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D189.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D470.65
corpora quadrigemina, adult.CNhs10501.16-22A460.22
corpus striatum, adult.CNhs10487.19-21D8117.12
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D559.27
cortex, neonate N30.CNhs11107.1392-42F255.23
diencephalon, adult.CNhs10482.20-12F283.12
diencephalon, neonate N30.CNhs11201.1388-42B261.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A268.30
epididymis, adult.CNhs10490.58-23B261.41
eyeball, adult.CNhs10484.31-12G491.96
eyeball, embryo E12.CNhs11016.345-16C610.67
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D49.34
eyeball, neonate N00.CNhs11207.633-15C68.37
eyeball, neonate N01.CNhs11140.1532-43E79.35
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C873.73
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D236.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D535.52
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C613.58
heart, embryo E17.CNhs11025.479-18E513.02
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E317.05
heart, neonate N03.CNhs11221.1349-25I210.53
heart, neonate N10.CNhs11118.749-24G115.60
heart, neonate N16.CNhs11209.782-15G114.11
heart, neonate N20.CNhs11127.821-26I620.32
heart, neonate N25.CNhs11196.1351-25D341.49
heart, neonate N30.CNhs11202.1390-42D242.95
hippocampus, adult.CNhs10478.13-16E865.40
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I3146.71
intestine, adult.CNhs10496.178-9A361.88
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H416.94
intestine, embryo E17.CNhs10582.482-18D329.35
intestine, embryo E18.CNhs10526.1289-20F756.12
intestine, neonate N00.CNhs11126.644-26D198.70
intestine, neonate N01.CNhs11192.1322-23E9135.38
intestine, neonate N06.CNhs11102.688-20B8194.78
intestine, neonate N07.CNhs11095.720-20F2221.04
intestine, neonate N10.CNhs11098.755-23A5209.78
intestine, neonate N20.CNhs11187.827-18D175.50
intestine, neonate N25.CNhs11121.1352-25E3117.80
intestine, neonate N30.CNhs11131.1384-42G1141.19
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C710.09
kidney, neonate N00.CNhs11214.646-21G78.00
kidney, neonate N10.CNhs11206.758-6D56.39
kidney, neonate N20.CNhs11113.832-19I19.30
kidney, neonate N25.CNhs11122.1353-25F315.07
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B277.37
liver, embryo E12.CNhs10601.355-15F810.51
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E116.86
liver, embryo E15.CNhs10520.433-16D729.21
liver, embryo E16.CNhs10523.462-17F534.49
liver, embryo E17.CNhs10510.481-18A352.20
liver, embryo E18.CNhs10579.499-43G471.92
liver, neonate N00.CNhs11117.641-24F491.77
liver, neonate N03.CNhs11123.1345-25G270.84
liver, neonate N06.CNhs11101.684-20A8115.01
liver, neonate N07.CNhs11103.716-20H2142.16
liver, neonate N10.CNhs11115.751-24B995.48
liver, neonate N20.CNhs11220.823-25A353.80
liver, neonate N25.CNhs11198.1368-26H151.31
liver, neonate N30.CNhs11106.1382-42D163.68
lung, adult.CNhs10474.28-22B1168.31
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C511.71
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I637.85
lung, neonate N00.CNhs11224.640-42C653.08
lung, neonate N06.CNhs11212.683-20E570.62
lung, neonate N07.CNhs11111.715-19A365.55
lung, neonate N10.CNhs11219.750-23E652.46
lung, neonate N20.CNhs11109.822-18A4122.41
lung, neonate N25.CNhs11119.1359-25C7146.44
lung, neonate N30.CNhs11133.1394-42H2163.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A18056.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14360.49
mammary gland, adult lactating day02.CNhs10480.595-22B676.72
mammary gland, adult pregnant day19.CNhs10476.588-5H282.51
medulla oblongata, adult.CNhs10477.17-12C288.95
medulla oblongata, neonate N30.CNhs11200.1396-42A358.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.91
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I948.52
ovary, adult.CNhs10507.91-2I757.20
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I410.10
oviduct, adult pregnant day01.CNhs10500.988-6G6101.79
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E510.56
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I722.14
pancreas, neonate N00.CNhs11105.645-26G952.20
pancreas, neonate N01.CNhs11138.1531-43D725.45
pancreas, neonate N02.CNhs11139.1539-43D822.46
pancreas, neonate N16.CNhs11136.787-43B622.44
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G839.49
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C78.02
pituitary gland, embryo E14.CNhs11037.398-44A511.79
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F616.05
pituitary gland, embryo E17.CNhs11039.1265-44F512.01
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G315.89
prostate, adult.CNhs10470.859-1F811.91
skin, adult.CNhs10492.30-1C334.79
skin, neonate N00.CNhs11124.650-25G423.57
skin, neonate N03.CNhs11215.662-22H311.52
skin, neonate N06.CNhs11097.693-20I513.13
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I1122.13
spinal cord, adult.CNhs10505.24-13C9104.58
spleen, adult.CNhs10465.25-2G2222.13
spleen, embryo E16.CNhs11035.461-43C179.46
spleen, embryo E18.CNhs11011.1271-21F286.30
spleen, neonate N10.CNhs11116.752-24D186.84
spleen, neonate N20.CNhs11112.824-19H1108.95
spleen, neonate N25.CNhs11099.1354-25G3152.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.66
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D414.47
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C632.32
stomach, neonate N03.CNhs11193.1340-24B816.86
stomach, neonate N07.CNhs11210.718-18A932.32
stomach, neonate N25.CNhs11104.1355-25E429.58
stomach, neonate N30.CNhs11134.1386-42I1251.06
submandibular gland, adult.CNhs10469.59-29C191.96
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I513.82
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B713.03
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B585.01
thymus, embryo E14.CNhs11041.402-44I412.97
thymus, embryo E15.CNhs11005.430-45I219.93
thymus, embryo E16.CNhs11002.456-26C529.10
thymus, embryo E17.CNhs10581.478-18C126.50
thymus, embryo E18.CNhs10595.1273-19G424.44
thymus, neonate N02.CNhs11181.1541-43F835.94
thymus, neonate N03.CNhs11137.2104-43C726.58
thymus, neonate N06.CNhs11197.681-26C431.20
thymus, neonate N07.CNhs11211.713-19D323.40
thymus, neonate N10.CNhs11194.748-24E432.67
thymus, neonate N20.CNhs11186.820-7A254.28
thymus, neonate N25.CNhs11125.1362-25G751.28
thymus, neonate N30.CNhs11132.1393-42G257.15
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E442.50
uterus, adult pregnant day19.CNhs10497.590-15F583.52
uterus, adult.CNhs10509.92-27E562.64
vagina, adult.CNhs10502.89-27D534.08
vesicular gland, adult.CNhs10491.51-27F848.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B324.09
whole body, neonate N00.CNhs10525.657-19C229.22
whole body, neonate N01.CNhs10576.659-23C623.53
whole body, neonate N06.CNhs10515.692-21D130.44
whole body, neonate N10.CNhs10518.761-6B429.45





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism4.39e-1151
bone marrow2.29e-0916
hemolymphoid system3.49e-0948
immune system3.49e-0948
hematopoietic system6.47e-0845
blood island6.47e-0845
digestive system8.77e-08116
digestive tract8.77e-08116
primitive gut8.77e-08116
bone element9.89e-0822
skeletal element9.89e-0822
skeletal system9.89e-0822
endoderm-derived structure1.41e-07118
endoderm1.41e-07118
presumptive endoderm1.41e-07118
subdivision of digestive tract3.55e-07114
gastrointestinal system6.84e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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