FFCP PHASE1:Mm9::chr4:126430616..126430684,-: Difference between revisions
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|id=chr4:126430616..126430684,- | |id=chr4:126430616..126430684,- | ||
|ontology_enrichment_celltype=CL:0000221!3.23e-16!44;CL:0000133!3.23e-16!44;CL:0002319!3.28e-16!43;CL:0000540!7.98e-14!33;CL:0000047!7.98e-14!33;CL:0000031!7.98e-14!33;CL:0000404!7.98e-14!33;CL:0000117!1.97e-12!23;CL:0000337!1.97e-12!23;CL:0000055!7.49e-12!50;CL:0000393!2.54e-10!39;CL:0000211!2.54e-10!39 | |ontology_enrichment_celltype=CL:0000221!3.23e-16!44;CL:0000133!3.23e-16!44;CL:0002319!3.28e-16!43;CL:0000540!7.98e-14!33;CL:0000047!7.98e-14!33;CL:0000031!7.98e-14!33;CL:0000404!7.98e-14!33;CL:0000117!1.97e-12!23;CL:0000337!1.97e-12!23;CL:0000055!7.49e-12!50;CL:0000393!2.54e-10!39;CL:0000211!2.54e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-16,44;CL:0000133,3.23e-16,44;CL:0002319,3.28e-16,43;CL:0000540,7.98e-14,33;CL:0000047,7.98e-14,33;CL:0000031,7.98e-14,33;CL:0000404,7.98e-14,33;CL:0000117,1.97e-12,23;CL:0000337,1.97e-12,23;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.29e-32!73;UBERON:0005743!4.29e-32!73;UBERON:0000073!6.76e-32!75;UBERON:0001016!6.76e-32!75;UBERON:0004121!5.51e-25!102;UBERON:0000924!5.51e-25!102;UBERON:0006601!5.51e-25!102;UBERON:0001049!3.75e-24!52;UBERON:0005068!3.75e-24!52;UBERON:0006241!3.75e-24!52;UBERON:0007135!3.75e-24!52;UBERON:0000955!2.33e-23!50;UBERON:0006238!2.33e-23!50;UBERON:0002346!3.60e-23!71;UBERON:0003075!3.60e-23!71;UBERON:0007284!3.60e-23!71;UBERON:0002616!1.16e-22!49;UBERON:0000033!7.32e-21!63;UBERON:0002020!1.24e-19!34;UBERON:0000153!2.07e-19!94;UBERON:0007811!1.22e-18!86;UBERON:0003080!1.95e-17!40;UBERON:0002791!7.17e-17!29;UBERON:0003528!7.17e-17!29;UBERON:0001893!7.17e-17!29;UBERON:0002780!9.03e-17!39;UBERON:0001890!9.03e-17!39;UBERON:0006240!9.03e-17!39;UBERON:0003056!2.90e-16!49;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!8.72e-11!17;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!4.29e-32!73;UBERON:0005743!4.29e-32!73;UBERON:0000073!6.76e-32!75;UBERON:0001016!6.76e-32!75;UBERON:0004121!5.51e-25!102;UBERON:0000924!5.51e-25!102;UBERON:0006601!5.51e-25!102;UBERON:0001049!3.75e-24!52;UBERON:0005068!3.75e-24!52;UBERON:0006241!3.75e-24!52;UBERON:0007135!3.75e-24!52;UBERON:0000955!2.33e-23!50;UBERON:0006238!2.33e-23!50;UBERON:0002346!3.60e-23!71;UBERON:0003075!3.60e-23!71;UBERON:0007284!3.60e-23!71;UBERON:0002616!1.16e-22!49;UBERON:0000033!7.32e-21!63;UBERON:0002020!1.24e-19!34;UBERON:0000153!2.07e-19!94;UBERON:0007811!1.22e-18!86;UBERON:0003080!1.95e-17!40;UBERON:0002791!7.17e-17!29;UBERON:0003528!7.17e-17!29;UBERON:0001893!7.17e-17!29;UBERON:0002780!9.03e-17!39;UBERON:0001890!9.03e-17!39;UBERON:0006240!9.03e-17!39;UBERON:0003056!2.90e-16!49;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!8.72e-11!17;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.29e-32,73;UBERON:0001016,6.76e-32,75;UBERON:0000073,1.22e-25,54;UBERON:0004121,5.43e-25,95;UBERON:0000924,5.43e-25,95;UBERON:0006601,5.43e-25,95;UBERON:0001049,3.75e-24,52;UBERON:0005068,3.75e-24,52;UBERON:0006241,3.75e-24,52;UBERON:0007135,3.75e-24,52;UBERON:0002346,9.67e-24,64;UBERON:0003075,9.67e-24,64;UBERON:0007284,9.67e-24,64;UBERON:0000955,2.79e-21,47;UBERON:0006238,2.79e-21,47;UBERON:0002616,1.34e-20,46;UBERON:0002020,1.24e-19,34;UBERON:0010371,8.94e-19,73;UBERON:0003080,1.95e-17,40;UBERON:0003528,7.17e-17,29;UBERON:0002791,7.17e-17,29;UBERON:0001893,7.17e-17,29;UBERON:0002780,9.03e-17,39;UBERON:0001890,9.03e-17,39;UBERON:0006240,9.03e-17,39;UBERON:0003056,2.90e-16,49;UBERON:0010314,2.13e-15,92;UBERON:0000956,1.53e-12,21;UBERON:0001869,1.53e-12,21;UBERON:0000203,1.53e-12,21;UBERON:0002619,8.72e-11,17;UBERON:0002021,7.61e-08,10;UBERON:0000411,7.61e-08,10;UBERON:0001950,7.61e-08,10;UBERON:0003076,2.39e-07,12;UBERON:0003057,2.39e-07,12 | |||
|phase1_expression=31.869620573854,23.0323769041978,29.1199513209303,11.1911758183527,12.0214975187123,26.1891664182548,28.2671295120586,44.4184232639022,78.8416844049334,78.1775517915458,62.3233404340838,64.9345374222038,52.0450218990865,58.8339308279852,28.3143297543313,21.4623783433216,10.4934281719222,28.3915948822414,31.3992052957142,24.6145998042858,162.772857349148,37.5319795539346,31.8663742749501,35.3583254373429,33.9525735979412,19.5238867799107,21.5380998079537,30.1659725760245,15.9619672343354,13.6096270070363,28.6032358745343,59.6928833052053,76.8830984480713,63.3926724061755,14.4425809875637,16.4572298904907,13.4751775133164,17.1597968602132,15.626706890476,17.2762835511353,16.4704816648684,16.3930916390027,19.4204141212461,25.1793635951155,21.2891555560981,22.7597972680485,92.3221786330686,74.1285531693518,84.3594941700372,85.743585491759,37.3763745739718,63.2511283205875,34.2276516357782,58.0289713609076,58.1442272516463,31.6429106324215,28.3668105539369,45.3791441204149,131.708016019598,149.175456154713,136.273751753829,51.1655243424389,42.6861502133347,58.0435317646502,85.0425071807598,65.3641705750412,79.6936293978957,98.7441044676395,70.5089363697648,92.8840855722032,86.2332341540666,389.342291742384,367.525252143485,86.7234858441875,68.0502844229478,139.721255564723,883.129365615097,943.098679097197,816.418724256934,117.642568655333,112.529801630964,102.619933999682,690.140373531414,547.005256950793,564.74232378309,270.469041464827,254.987680311193,172.233087942578,34.3039655799324,43.000217700761,35.073603132903,12.9063581547208,96.5559293865006,23.746940432064,31.1892680374881,28.2256938871321,50.5599912474307,43.1188716122486,26.4981724694926,39.9273719196684,42.1121825132275,44.9142670950112,99.3740434855918,85.3280043783997,29.2262905365139,18.4952701796822,26.2872711407687,35.7395543520658,51.26970096214,52.1031908117535,36.2584332941224,44.7564253118848,32.9780161076164,35.5705431704189,41.3912249117681,30.0343153277924,26.6970565153124,29.2090700978222,16.8076004870476,33.9710384889559,16.7839554029899,22.3042616442202,33.550517019262,301.564220921894,319.615674597332,19.9256503062701,25.0413610217373,15.5974710058286,26.9388881394897,884.513725685478,1152.90151910294,207.832298394678,950.123734170983,728.277622476781,852.346558783315,820.129584807515,30.3481304273943,23.2641035040874,41.95197789999,35.3542317889276,32.5301107406759,25.0593293832485,35.6523017014591,33.6071743773645,46.5369654195083,48.9394411488126,43.8524070939531,80.9741550413119,41.8201906289714,42.5488680377593,42.2282697993477,32.8793598641362,45.8777961222236,38.3077383174383,41.1564272815887,24.0831462850377,29.4929538671559,25.9921386185862,26.1430419443945,33.5543751507513,40.8075344367107,28.4498057108403,37.6424129580484,33.4499193970587,28.3851487712776,31.3920825413051,28.4369805483596,23.8201298429026,27.9751744852917,23.4759473633106,24.9691933401236,24.1229979251798,26.5655639502171,23.8887425393462,1520.81690801577,149.829115624238,17.8426142811251,24.5939026997096,32.2065258308203,35.5322107946471,37.1138288607629,34.0845156613449,34.24621875211,29.2947464213341,22.7773949541366,34.9161784014903,28.4008785944305,27.8539060857611,27.2949721966768,28.7622210769351,25.7204279350886,24.0960940637784,25.9845024305722,29.0191222028711,34.9393980586549,32.7878637830956,28.7049681008086,35.2081815849399,29.7844089855252,29.0791991519816,26.8467824608751,29.6153193412321,27.2736416920177,26.1946815974268,24.5698743891504,22.0364870137157,19.6774317746848,13.9882752656402,15.0229252551038,13.5217184601881,25.4552306036806,17.0228076176611,5.75072826109418,14.8856379067401,16.8500343481863,14.6495749209325,16.5045620440159,13.5084185981743,32.5165614693224,22.9284608242287,34.3856100292675,31.572585954185,27.2240688014662,28.141051250225,24.9945822930314,36.0997248536928,32.9457451181939,33.2197034473162,34.2827752613597,26.5458569839496,23.8305274974936,28.4958645405578,25.6345182696763,48.9515115436839,19.6705709207614,22.3508764506833,590.183968795123,482.794937073285,50.491963176016,16.4106102682842,44.8021671571084,55.4423016901227,65.9195597062365,48.7496347823206,45.0053321646436,61.1445306503878,53.0302019194112,58.1589157243511,57.7120155801924,882.02701357786,42.5820255624806,31.3395462454369,32.0887309926545,42.3973216039416,22.5666735177937,25.977528068583,26.9067965698628,28.2907619633847,36.9127366100966,36.5847826053274,28.6855405416725,26.1744285223804,27.8067955140083,32.2357493094532,28.4630243152497,19.5957532171555,49.3637428342993,28.449652856947,41.2654201266987,32.1505552547388,30.8572006537556,40.8464592308742,49.5292552012384,85.859115650317,22.5284839741162,23.9370240076117,115.777408978855,29.0199805177005,37.2982825667542,25.5123672446099,27.4556391207214,23.8004304630339,24.7758711135373,577.599815762738,21.7006018613273,35.9113150256007,34.075793036027,19.0252141574738,24.1948783066215,18.3022538565218,22.9470880491705,26.3108730368477,29.98939431556,28.6401185404534,34.4806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| ||
|short_description=p1@Ncdn | |short_description=p1@Ncdn | ||
}} | }} |
Revision as of 22:07, 13 November 2012
Short description: | p1@Ncdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ncdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000030637, ENSMUST00000106116, ENSMUST00000127079, NM_011986, uc008utt.2, uc008utu.2_5end |
EntrezGene: | Ncdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.23e-16 | 44 |
neurectodermal cell | 3.23e-16 | 44 |
neural cell | 3.28e-16 | 43 |
neuron | 7.98e-14 | 33 |
neuronal stem cell | 7.98e-14 | 33 |
neuroblast | 7.98e-14 | 33 |
electrically signaling cell | 7.98e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.97e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-12 | 23 |
electrically responsive cell | 2.54e-10 | 39 |
electrically active cell | 2.54e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.