FFCP PHASE1:Mm9::chr16:18066509..18066552,+: Difference between revisions
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|id=chr16:18066509..18066552,+ | |id=chr16:18066509..18066552,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.52e-17!70;CL:0000220!1.52e-17!70;CL:0000221!1.82e-15!44;CL:0000133!1.82e-15!44;CL:0002319!6.07e-15!43;CL:0000055!1.04e-14!50;CL:0000117!3.43e-12!23;CL:0000337!3.43e-12!23;CL:0000540!2.08e-10!33;CL:0000047!2.08e-10!33;CL:0000031!2.08e-10!33;CL:0000404!2.08e-10!33;CL:0000393!8.81e-10!39;CL:0000211!8.81e-10!39;CL:0000548!3.85e-08!115;CL:0000004!3.85e-08!115;CL:0000255!3.85e-08!115;CL:0002371!3.40e-07!118 | |ontology_enrichment_celltype=CL:0002321!1.52e-17!70;CL:0000220!1.52e-17!70;CL:0000221!1.82e-15!44;CL:0000133!1.82e-15!44;CL:0002319!6.07e-15!43;CL:0000055!1.04e-14!50;CL:0000117!3.43e-12!23;CL:0000337!3.43e-12!23;CL:0000540!2.08e-10!33;CL:0000047!2.08e-10!33;CL:0000031!2.08e-10!33;CL:0000404!2.08e-10!33;CL:0000393!8.81e-10!39;CL:0000211!8.81e-10!39;CL:0000548!3.85e-08!115;CL:0000004!3.85e-08!115;CL:0000255!3.85e-08!115;CL:0002371!3.40e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.52e-17,70;CL:0000221,1.82e-15,44;CL:0000133,1.82e-15,44;CL:0002319,6.07e-15,43;CL:0000117,3.43e-12,23;CL:0000337,3.43e-12,23;CL:0000540,2.08e-10,33;CL:0000047,2.08e-10,33;CL:0000031,2.08e-10,33;CL:0000404,2.08e-10,33;CL:0000393,8.81e-10,39;CL:0000211,8.81e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.74e-13!75;UBERON:0001016!5.74e-13!75;UBERON:0001017!7.38e-13!73;UBERON:0005743!7.38e-13!73;UBERON:0004121!5.52e-09!102;UBERON:0000924!5.52e-09!102;UBERON:0006601!5.52e-09!102;UBERON:0001049!1.24e-08!52;UBERON:0005068!1.24e-08!52;UBERON:0006241!1.24e-08!52;UBERON:0007135!1.24e-08!52;UBERON:0000955!9.68e-08!50;UBERON:0006238!9.68e-08!50;UBERON:0002616!1.02e-07!49;UBERON:0002020!4.09e-07!34;UBERON:0002346!6.36e-07!71;UBERON:0003075!6.36e-07!71;UBERON:0007284!6.36e-07!71 | |ontology_enrichment_uberon=UBERON:0000073!5.74e-13!75;UBERON:0001016!5.74e-13!75;UBERON:0001017!7.38e-13!73;UBERON:0005743!7.38e-13!73;UBERON:0004121!5.52e-09!102;UBERON:0000924!5.52e-09!102;UBERON:0006601!5.52e-09!102;UBERON:0001049!1.24e-08!52;UBERON:0005068!1.24e-08!52;UBERON:0006241!1.24e-08!52;UBERON:0007135!1.24e-08!52;UBERON:0000955!9.68e-08!50;UBERON:0006238!9.68e-08!50;UBERON:0002616!1.02e-07!49;UBERON:0002020!4.09e-07!34;UBERON:0002346!6.36e-07!71;UBERON:0003075!6.36e-07!71;UBERON:0007284!6.36e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.74e-13,75;UBERON:0001017,7.38e-13,73;UBERON:0000073,1.17e-09,54;UBERON:0004121,1.72e-09,95;UBERON:0000924,1.72e-09,95;UBERON:0006601,1.72e-09,95;UBERON:0001049,1.24e-08,52;UBERON:0005068,1.24e-08,52;UBERON:0006241,1.24e-08,52;UBERON:0007135,1.24e-08,52;UBERON:0002346,1.57e-07,64;UBERON:0003075,1.57e-07,64;UBERON:0007284,1.57e-07,64;UBERON:0010371,2.46e-07,73;UBERON:0002020,4.09e-07,34;UBERON:0010314,4.92e-07,92;UBERON:0000955,8.37e-07,47;UBERON:0006238,8.37e-07,47;UBERON:0002616,8.85e-07,46 | |||
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| ||
|short_description=p1@Dgcr6 | |short_description=p1@Dgcr6 | ||
}} | }} |
Revision as of 04:53, 14 November 2012
Short description: | p1@Dgcr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dgcr6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066027, ENSMUST00000155387_5end |
EntrezGene: | Dgcr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.52e-17 | 70 |
ectodermal cell | 1.82e-15 | 44 |
neurectodermal cell | 1.82e-15 | 44 |
neural cell | 6.07e-15 | 43 |
CNS neuron (sensu Vertebrata) | 3.43e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-12 | 23 |
neuron | 2.08e-10 | 33 |
neuronal stem cell | 2.08e-10 | 33 |
neuroblast | 2.08e-10 | 33 |
electrically signaling cell | 2.08e-10 | 33 |
electrically responsive cell | 8.81e-10 | 39 |
electrically active cell | 8.81e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.74e-13 | 75 |
central nervous system | 7.38e-13 | 73 |
regional part of nervous system | 1.17e-09 | 54 |
ectoderm-derived structure | 1.72e-09 | 95 |
ectoderm | 1.72e-09 | 95 |
presumptive ectoderm | 1.72e-09 | 95 |
neural tube | 1.24e-08 | 52 |
neural rod | 1.24e-08 | 52 |
future spinal cord | 1.24e-08 | 52 |
neural keel | 1.24e-08 | 52 |
neurectoderm | 1.57e-07 | 64 |
neural plate | 1.57e-07 | 64 |
presumptive neural plate | 1.57e-07 | 64 |
ecto-epithelium | 2.46e-07 | 73 |
gray matter | 4.09e-07 | 34 |
structure with developmental contribution from neural crest | 4.92e-07 | 92 |
brain | 8.37e-07 | 47 |
future brain | 8.37e-07 | 47 |
regional part of brain | 8.85e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.