FFCP PHASE1:Mm9::chr4:88956930..88956934,-: Difference between revisions
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|id=chr4:88956930..88956934,- | |id=chr4:88956930..88956934,- | ||
|ontology_enrichment_celltype=CL:0000239!5.71e-07!6;CL:0000677!5.71e-07!6;CL:0000212!5.71e-07!6;CL:0000584!5.71e-07!6 | |ontology_enrichment_celltype=CL:0000239!5.71e-07!6;CL:0000677!5.71e-07!6;CL:0000212!5.71e-07!6;CL:0000584!5.71e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.47e-24,6;CL:0000677,2.47e-24,6;CL:0000584,2.47e-24,6;CL:0000075,8.67e-21,7;CL:0002563,4.69e-16,9;CL:0002251,4.69e-16,9;CL:0000682,3.78e-13,3;CL:0000066,4.79e-12,25;CL:0000473,1.91e-09,7;CL:0002076,2.07e-09,15;CL:0002603,1.35e-08,2;CL:0000223,6.57e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.08e-08!43;UBERON:0005409!2.03e-08!59;UBERON:0000344!3.22e-08!15;UBERON:0001242!9.91e-07!13;UBERON:0000060!9.91e-07!13;UBERON:0001262!9.91e-07!13;UBERON:0004786!9.91e-07!13 | |ontology_enrichment_uberon=UBERON:0000160!1.08e-08!43;UBERON:0005409!2.03e-08!59;UBERON:0000344!3.22e-08!15;UBERON:0001242!9.91e-07!13;UBERON:0000060!9.91e-07!13;UBERON:0001262!9.91e-07!13;UBERON:0004786!9.91e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.70e-25,15;UBERON:0001242,1.68e-23,13;UBERON:0001262,1.68e-23,13;UBERON:0004786,1.68e-23,13;UBERON:0000160,3.54e-16,31;UBERON:0003350,4.69e-16,9;UBERON:0004808,4.69e-16,9;UBERON:0001277,4.69e-16,9;UBERON:0004923,5.88e-15,24;UBERON:0000485,4.88e-13,11;UBERON:0005409,5.93e-10,47 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,1.81478526784098,3.50627010962443,2.85394762250213,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.60586496747019,2.8711598205751,3.01533397311352,2.80112602491656,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.367093504323363,2.34717403304412,1.09012578190223,0.878744730937887,0.58328969722285,0.979904951377538,0,0,0,0,1.28629718017973,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,1.77858959222228,0,0,0.7104801149461,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,0.253359865475099,0,0.45673551887624,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,0.289198713839823,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0.257734922644187,0.605050573870028,0.444756087689741,0.760902504450237,0.474529061544512,0.658795818896044,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,1.15719246865209,0,0,0,0,0,0,0,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0,5.23463111459042,4.54999239389536,1.81478526784098,3.50627010962443,2.85394762250213,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.60586496747019,2.8711598205751,3.01533397311352,2.80112602491656,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.367093504323363,2.34717403304412,1.09012578190223,0.878744730937887,0.58328969722285,0.979904951377538,0,0,0,0,1.28629718017973,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,1.77858959222228,0,0,0.7104801149461,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,0.253359865475099,0,0.45673551887624,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,0.289198713839823,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0.257734922644187,0.605050573870028,0.444756087689741,0.760902504450237,0.474529061544512,0.658795818896044,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,1.15719246865209,0,0,0,0,0,0,0,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p2@Cdkn2b | |short_description=p2@Cdkn2b | ||
}} | }} |
Revision as of 12:26, 14 November 2012
Short description: | p2@Cdkn2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdkn2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 6bp_to_ENSMUST00000097981, NM_007670, uc008tok.2_5end |
EntrezGene: | Cdkn2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.47e-24 | 6 |
gut absorptive cell | 2.47e-24 | 6 |
enterocyte | 2.47e-24 | 6 |
columnar/cuboidal epithelial cell | 8.67e-21 | 7 |
intestinal epithelial cell | 4.69e-16 | 9 |
epithelial cell of alimentary canal | 4.69e-16 | 9 |
M cell of gut | 3.78e-13 | 3 |
epithelial cell | 4.79e-12 | 25 |
defensive cell | 1.91e-09 | 7 |
endo-epithelial cell | 2.07e-09 | 15 |
astrocyte of the cerebellum | 1.35e-08 | 2 |
endodermal cell | 6.57e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.70e-25 | 15 |
intestinal mucosa | 1.68e-23 | 13 |
wall of intestine | 1.68e-23 | 13 |
gastrointestinal system mucosa | 1.68e-23 | 13 |
intestine | 3.54e-16 | 31 |
epithelium of mucosa | 4.69e-16 | 9 |
gastrointestinal system epithelium | 4.69e-16 | 9 |
intestinal epithelium | 4.69e-16 | 9 |
organ component layer | 5.88e-15 | 24 |
simple columnar epithelium | 4.88e-13 | 11 |
gastrointestinal system | 5.93e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.