FFCP PHASE1:Mm9::chr3:89041849..89041862,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:89041849..89041862,- | |id=chr3:89041849..89041862,- | ||
|ontology_enrichment_celltype=CL:0002563!4.15e-14!9;CL:0002251!4.15e-14!9;CL:0000066!5.70e-13!25;CL:0000473!4.65e-12!3;CL:0000627!4.65e-12!3;CL:0000682!4.65e-12!3;CL:0000239!2.28e-10!6;CL:0000677!2.28e-10!6;CL:0000212!2.28e-10!6;CL:0000584!2.28e-10!6;CL:0000075!6.85e-09!7;CL:0002076!3.20e-08!15;CL:0000223!5.25e-08!20 | |ontology_enrichment_celltype=CL:0002563!4.15e-14!9;CL:0002251!4.15e-14!9;CL:0000066!5.70e-13!25;CL:0000473!4.65e-12!3;CL:0000627!4.65e-12!3;CL:0000682!4.65e-12!3;CL:0000239!2.28e-10!6;CL:0000677!2.28e-10!6;CL:0000212!2.28e-10!6;CL:0000584!2.28e-10!6;CL:0000075!6.85e-09!7;CL:0002076!3.20e-08!15;CL:0000223!5.25e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.54e-30,3;CL:0000239,1.46e-26,6;CL:0000677,1.46e-26,6;CL:0000584,1.46e-26,6;CL:0000075,7.61e-23,7;CL:0000066,3.82e-19,25;CL:0002563,7.01e-18,9;CL:0002251,7.01e-18,9;CL:0000473,2.54e-13,7;CL:0002076,6.76e-11,15;CL:0000223,2.95e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.64e-18!15;UBERON:0003350!4.15e-14!9;UBERON:0004808!4.15e-14!9;UBERON:0001277!4.15e-14!9;UBERON:0001242!6.13e-13!13;UBERON:0000060!6.13e-13!13;UBERON:0001262!6.13e-13!13;UBERON:0004786!6.13e-13!13;UBERON:0000485!1.96e-11!11;UBERON:0004923!9.97e-11!24;UBERON:0001962!7.59e-08!2;UBERON:0001961!7.59e-08!2;UBERON:0001744!7.59e-08!2 | |ontology_enrichment_uberon=UBERON:0000344!4.64e-18!15;UBERON:0003350!4.15e-14!9;UBERON:0004808!4.15e-14!9;UBERON:0001277!4.15e-14!9;UBERON:0001242!6.13e-13!13;UBERON:0000060!6.13e-13!13;UBERON:0001262!6.13e-13!13;UBERON:0004786!6.13e-13!13;UBERON:0000485!1.96e-11!11;UBERON:0004923!9.97e-11!24;UBERON:0001962!7.59e-08!2;UBERON:0001961!7.59e-08!2;UBERON:0001744!7.59e-08!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.22e-19,13;UBERON:0001262,6.22e-19,13;UBERON:0004786,6.22e-19,13;UBERON:0003350,7.01e-18,9;UBERON:0004808,7.01e-18,9;UBERON:0001277,7.01e-18,9;UBERON:0000344,1.92e-16,15;UBERON:0000485,1.03e-14,11;UBERON:0004923,2.40e-10,24;UBERON:0000160,4.93e-08,31 | |||
|phase1_expression=0,10.1202868215415,5.0049916332849,0,0,4.19698179779725,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,6.31655160526522,3.4460959692726,9.48073423817912,0,0,2.66076612786366,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,10.1202868215415,5.0049916332849,0,0,4.19698179779725,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,6.31655160526522,3.4460959692726,9.48073423817912,0,0,2.66076612786366,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:89041849..89041862,- | |short_description=p@chr3:89041849..89041862,- | ||
}} | }} |
Revision as of 15:42, 14 November 2012
Short description: | p@chr3:89041849..89041862, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:89041849..89041862, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.54e-30 | 3 |
brush border epithelial cell | 1.46e-26 | 6 |
gut absorptive cell | 1.46e-26 | 6 |
enterocyte | 1.46e-26 | 6 |
columnar/cuboidal epithelial cell | 7.61e-23 | 7 |
epithelial cell | 3.82e-19 | 25 |
intestinal epithelial cell | 7.01e-18 | 9 |
epithelial cell of alimentary canal | 7.01e-18 | 9 |
defensive cell | 2.54e-13 | 7 |
endo-epithelial cell | 6.76e-11 | 15 |
endodermal cell | 2.95e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.22e-19 | 13 |
wall of intestine | 6.22e-19 | 13 |
gastrointestinal system mucosa | 6.22e-19 | 13 |
epithelium of mucosa | 7.01e-18 | 9 |
gastrointestinal system epithelium | 7.01e-18 | 9 |
intestinal epithelium | 7.01e-18 | 9 |
mucosa | 1.92e-16 | 15 |
simple columnar epithelium | 1.03e-14 | 11 |
organ component layer | 2.40e-10 | 24 |
intestine | 4.93e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.