Personal tools

FFCP PHASE1:Mm9::chr9:58884130..58884151,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr9:58884130..58884151,-
|id=chr9:58884130..58884151,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.02e-10!333;UBERON:0004111!9.50e-08!122;UBERON:0000025!1.40e-07!114;UBERON:0000922!5.29e-07!328;UBERON:0001049!5.78e-07!52;UBERON:0005068!5.78e-07!52;UBERON:0006241!5.78e-07!52;UBERON:0007135!5.78e-07!52;UBERON:0003103!5.98e-07!43;UBERON:0000479!9.25e-07!349
|ontology_enrichment_uberon=UBERON:0000468!2.02e-10!333;UBERON:0004111!9.50e-08!122;UBERON:0000025!1.40e-07!114;UBERON:0000922!5.29e-07!328;UBERON:0001049!5.78e-07!52;UBERON:0005068!5.78e-07!52;UBERON:0006241!5.78e-07!52;UBERON:0007135!5.78e-07!52;UBERON:0003103!5.98e-07!43;UBERON:0000479!9.25e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.04e-11,92;UBERON:0010371,5.79e-08,73;UBERON:0003103,3.83e-07,43;UBERON:0004111,4.13e-07,122;UBERON:0000073,5.31e-07,54;UBERON:0000025,6.81e-07,114;UBERON:0001049,8.38e-07,52;UBERON:0005068,8.38e-07,52;UBERON:0006241,8.38e-07,52;UBERON:0007135,8.38e-07,52;UBERON:0007100,8.57e-07,18;UBERON:0000948,8.57e-07,18;UBERON:0005498,8.57e-07,18;UBERON:0004140,8.57e-07,18;UBERON:0009881,8.57e-07,18;UBERON:0004141,8.57e-07,18;UBERON:0003084,8.57e-07,18;UBERON:0007005,8.57e-07,18;UBERON:0004139,8.57e-07,18;UBERON:0004291,8.57e-07,18
|phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,1.20985684522732,1.00179145989269,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.0992909512008853,0.261199789138935,0.47997726838022,0.91763712426868,0,0,0.215471232685889,1.14014051673824,2.26827116783938,1.33038306393183,0,0,0,0.577703239502549,1.49611180822643,0.816677425049476,0,0,0,0,0,0,1.25896817975577,1.72340783073175,0.550640256485045,4.69434806608824,1.30815093828268,2.19686182734472,3.11087838518853,2.2397827460058,2.87505128729943,0,0,0,2.05807548828758,2.0057340795713,3.6097046459421,4.24864567805155,1.05798195854407,2.53532561402472,0.677689064138264,1.77858959222228,0,0,0,1.19840044207362,0.768436610643109,2.48855069540346,1.62007125998029,1.68259969081106,3.14216082844184,3.3130281142742,2.69479758272899,1.34183659425531,0.919218786610021,4.40463523997555,2.42605942361857,1.0752457327937,2.76961204233407,1.73826522844578,3.12548022334056,1.67509799400829,1.12552522006336,0.916789486660861,2.35702868378934,2.42031857358475,2.23679334990361,0.151452386666368,0.151143120213571,0.869593466105033,0,0,1.07940638327563,0,0.896053774194671,0.280888840263504,1.53387290320252,1.03914401841148,0.35333957451034,2.67602497575693,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.79928715803342,0.258937883647172,1.7813056687779,2.4287945747259,1.21786191324856,0.691846491768175,0.904335843315735,1.29347577849275,1.0053327306374,0.247194967734374,1.44599356919912,0,0.808834249737046,1.10420759230197,0.969750506270444,1.86391761218122,1.75668478206928,3.97948742945565,2.04365644166873,0,0,0,1.3481157546434,1.37250180845588,2.01046963380583,1.56441888173049,3.83573185995496,1.66230435647648,2.27137768294861,3.05518091550949,1.7416975885413,0.505445516867349,1.05220927943237,2.73252930221678,1.14951052216736,1.62055916824814,1.65775299619287,2.51735046859913,1.15302348256365,1.96773621575431,0.776110112217047,2.37124792226126,3.9712276835242,3.69497360744293,1.97276159184817,2.50242524303038,1.39300866608867,1.64625709126355,2.7864797354589,0,0,0,2.07125772535502,1.17263029990548,1.2604344302271,2.60419209143731,2.36117078096885,2.62254091908543,4.18561100550734,1.60964040839772,3.50296027101508,2.46839774870221,2.79084688934462,2.83740833410495,1.60819986167866,2.85415149878366,3.35516046900929,1.05144974282064,4.32199371992995,1.32167513193519,1.32225283331772,3.19932375802851,1.62565670302307,1.28867461322093,0.605050573870028,0.889512175379481,0.951128130562796,2.37264530772256,0.823494773620054,1.25667604400135,1.1937388322469,1.16978452271472,1.79763881730844,2.59365659849633,2.19055400579804,2.65535061334314,1.71372768914593,1.1270773567308,0.814605311381257,1.74557238450863,2.24434623649019,2.02356918797623,1.47610147979602,1.255989822731,1.1105744752962,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.486405680325106,0.274561413188081,0,1.48856379067401,0,0.757736633841335,0.896987067609561,2.41221760681684,1.10851914099963,3.41084541186873,1.62964976442026,2.37643120085263,0.938760993154008,1.50755631697634,2.14239276797412,2.53673742215138,1.7339865851681,2.43611158613652,1.91345722388985,0.983179888294428,1.72684981865896,2.02508682014116,0,0,1.96705709207614,2.20749397043786,2.0871576698413,3.16471553798949,0.819674726883377,2.52470927204373,1.57754109708128,0.780877488593277,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,1.84522110770749,2.84904965867608,2.44330439030364,1.97964147567043,1.32745138339963,1.69946445308487,1.209294227859,0.943025398779491,1.77181135728464,0.614870295887855,1.29214146584111,0.727067458955011,2.85197902707777,0,3.16255825724996,0,1.02131881726136,1.62054984628179,1.94038025674132,2.7863814554107,2.48276327099183,1.60531935841864,2.46823530903181,2.74018454203139,0.469343416127421,0.21183207086382,1.54369878638473,0.65954501176592,2.09903754704677,1.93001359770099,2.50681922406587,2.46211349617592,1.45740418314925,3.15223013417866,0,1.44470807574256,1.48155621895769,0.188368457004691,0,0,0,0,0,0.954670618015114,2.84702394223022,2.23651413839534,1.29606408986162,1.04544148007234,1.31017538247707,1.88810084938749,2.23164330458407,3.66458318777641,1.8146096260851,0,0.56369293868419,2.99033092087958,1.82004339502807,1.94451188344048,2.19571699912143,2.70329800785245,3.0512882047896,4.81756223922615,4.8235298435827,1.20792060413003,1.44015003128933,0,0.608175645870493,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,1.36038230169127,0.221985953374065,0.0897138566094757,0,1.73870634628971,1.12609485270709,1.28206136987086,0.643105137237198,1.50471631210609,1.12950368523413,1.84130094602871,0.572895513439397,2.06223818812425,0,1.5107877947794,0.675022500231806,1.80128481289688,0.906284817968409,0,0.726511433089237,0.798049746802062,0.853668028770671,2.67417388775123,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.50901073108861,0.749132059759059,1.21647789569252,2.12511235135769,1.42888107384922,1.97003354106254,0.77163688185482,1.64834360321323,1.17759136107518,0.342869252385415,0.887379030796687,1.90748951957857,2.0348498328526,1.78807822789128,2.03075058940024,1.64635175585495,1.05227884575137,0.950628796921032,1.68342681497322,1.06771516311757,1.77308068276014,0.409231043169689,1.39443157067369,1.54325288784913,2.74791635731741,2.57324769289949,2.79332370262788,3.06061331310149,2.20591419119516,0.927471342481686
|phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,1.20985684522732,1.00179145989269,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.0992909512008853,0.261199789138935,0.47997726838022,0.91763712426868,0,0,0.215471232685889,1.14014051673824,2.26827116783938,1.33038306393183,0,0,0,0.577703239502549,1.49611180822643,0.816677425049476,0,0,0,0,0,0,1.25896817975577,1.72340783073175,0.550640256485045,4.69434806608824,1.30815093828268,2.19686182734472,3.11087838518853,2.2397827460058,2.87505128729943,0,0,0,2.05807548828758,2.0057340795713,3.6097046459421,4.24864567805155,1.05798195854407,2.53532561402472,0.677689064138264,1.77858959222228,0,0,0,1.19840044207362,0.768436610643109,2.48855069540346,1.62007125998029,1.68259969081106,3.14216082844184,3.3130281142742,2.69479758272899,1.34183659425531,0.919218786610021,4.40463523997555,2.42605942361857,1.0752457327937,2.76961204233407,1.73826522844578,3.12548022334056,1.67509799400829,1.12552522006336,0.916789486660861,2.35702868378934,2.42031857358475,2.23679334990361,0.151452386666368,0.151143120213571,0.869593466105033,0,0,1.07940638327563,0,0.896053774194671,0.280888840263504,1.53387290320252,1.03914401841148,0.35333957451034,2.67602497575693,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.79928715803342,0.258937883647172,1.7813056687779,2.4287945747259,1.21786191324856,0.691846491768175,0.904335843315735,1.29347577849275,1.0053327306374,0.247194967734374,1.44599356919912,0,0.808834249737046,1.10420759230197,0.969750506270444,1.86391761218122,1.75668478206928,3.97948742945565,2.04365644166873,0,0,0,1.3481157546434,1.37250180845588,2.01046963380583,1.56441888173049,3.83573185995496,1.66230435647648,2.27137768294861,3.05518091550949,1.7416975885413,0.505445516867349,1.05220927943237,2.73252930221678,1.14951052216736,1.62055916824814,1.65775299619287,2.51735046859913,1.15302348256365,1.96773621575431,0.776110112217047,2.37124792226126,3.9712276835242,3.69497360744293,1.97276159184817,2.50242524303038,1.39300866608867,1.64625709126355,2.7864797354589,0,0,0,2.07125772535502,1.17263029990548,1.2604344302271,2.60419209143731,2.36117078096885,2.62254091908543,4.18561100550734,1.60964040839772,3.50296027101508,2.46839774870221,2.79084688934462,2.83740833410495,1.60819986167866,2.85415149878366,3.35516046900929,1.05144974282064,4.32199371992995,1.32167513193519,1.32225283331772,3.19932375802851,1.62565670302307,1.28867461322093,0.605050573870028,0.889512175379481,0.951128130562796,2.37264530772256,0.823494773620054,1.25667604400135,1.1937388322469,1.16978452271472,1.79763881730844,2.59365659849633,2.19055400579804,2.65535061334314,1.71372768914593,1.1270773567308,0.814605311381257,1.74557238450863,2.24434623649019,2.02356918797623,1.47610147979602,1.255989822731,1.1105744752962,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.486405680325106,0.274561413188081,0,1.48856379067401,0,0.757736633841335,0.896987067609561,2.41221760681684,1.10851914099963,3.41084541186873,1.62964976442026,2.37643120085263,0.938760993154008,1.50755631697634,2.14239276797412,2.53673742215138,1.7339865851681,2.43611158613652,1.91345722388985,0.983179888294428,1.72684981865896,2.02508682014116,0,0,1.96705709207614,2.20749397043786,2.0871576698413,3.16471553798949,0.819674726883377,2.52470927204373,1.57754109708128,0.780877488593277,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,1.84522110770749,2.84904965867608,2.44330439030364,1.97964147567043,1.32745138339963,1.69946445308487,1.209294227859,0.943025398779491,1.77181135728464,0.614870295887855,1.29214146584111,0.727067458955011,2.85197902707777,0,3.16255825724996,0,1.02131881726136,1.62054984628179,1.94038025674132,2.7863814554107,2.48276327099183,1.60531935841864,2.46823530903181,2.74018454203139,0.469343416127421,0.21183207086382,1.54369878638473,0.65954501176592,2.09903754704677,1.93001359770099,2.50681922406587,2.46211349617592,1.45740418314925,3.15223013417866,0,1.44470807574256,1.48155621895769,0.188368457004691,0,0,0,0,0,0.954670618015114,2.84702394223022,2.23651413839534,1.29606408986162,1.04544148007234,1.31017538247707,1.88810084938749,2.23164330458407,3.66458318777641,1.8146096260851,0,0.56369293868419,2.99033092087958,1.82004339502807,1.94451188344048,2.19571699912143,2.70329800785245,3.0512882047896,4.81756223922615,4.8235298435827,1.20792060413003,1.44015003128933,0,0.608175645870493,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,1.36038230169127,0.221985953374065,0.0897138566094757,0,1.73870634628971,1.12609485270709,1.28206136987086,0.643105137237198,1.50471631210609,1.12950368523413,1.84130094602871,0.572895513439397,2.06223818812425,0,1.5107877947794,0.675022500231806,1.80128481289688,0.906284817968409,0,0.726511433089237,0.798049746802062,0.853668028770671,2.67417388775123,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.50901073108861,0.749132059759059,1.21647789569252,2.12511235135769,1.42888107384922,1.97003354106254,0.77163688185482,1.64834360321323,1.17759136107518,0.342869252385415,0.887379030796687,1.90748951957857,2.0348498328526,1.78807822789128,2.03075058940024,1.64635175585495,1.05227884575137,0.950628796921032,1.68342681497322,1.06771516311757,1.77308068276014,0.409231043169689,1.39443157067369,1.54325288784913,2.74791635731741,2.57324769289949,2.79332370262788,3.06061331310149,2.20591419119516,0.927471342481686
|short_description=p3@Neo1
|short_description=p3@Neo1
}}
}}

Revision as of 06:58, 15 November 2012

Short description:p3@Neo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Neo1_5end
Coexpression cluster:NA
Association with transcript: 96bp_to_ENSMUST00000068664, ENSMUST00000114096, ENSMUST00000114098, NM_001042752, NM_008684, uc009pxk.1, uc009pxl.1, uc009pxn.1_5end
EntrezGene:Neo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Neo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:58884130..58884151,-&oldid=2368102"