FFCP PHASE1:Hg19::chr6:169616396..169616409,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.28e-19!180;CL:0000057!3.10e-19!75;CL:0002334!2.45e-13!12;CL:0000723!3.40e-08!436;CL:0000048!5.39e-08!430;CL:0000034!1.76e-07!444;CL:0000187!2.57e-07!54;CL:0000680!4.02e-07!57;CL:0000056!4.02e-07!57;CL:0000355!4.02e-07!57;CL:0002620!9.28e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.28e-19!180;CL:0000057!3.10e-19!75;CL:0002334!2.45e-13!12;CL:0000723!3.40e-08!436;CL:0000048!5.39e-08!430;CL:0000034!1.76e-07!444;CL:0000187!2.57e-07!54;CL:0000680!4.02e-07!57;CL:0000056!4.02e-07!57;CL:0000355!4.02e-07!57;CL:0002620!9.28e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.44e-20;12!CL:0000134;1.32e-10;55!CL:0000569;3.05e-10;4!CL:1000306;3.16e-10;4!CL:0002547;3.16e-10;4!CL:0000136;9.63e-10;13!CL:0002615;1.89e-09;3!CL:0000135;6.17e-09;3!CL:0002579;6.17e-09;3!CL:0000388;6.17e-09;3!CL:0000048;9.03e-09;58!CL:0002580;1.54e-08;3!CL:0000197;9.05e-08;6!CL:0000098;9.05e-08;6!CL:0002167;9.05e-08;6!CL:0000723;1.61e-07;61!CL:0000034;7.52e-07;69 | |ontology_enrichment_celltype_v019=CL:0002334;4.44e-20;12!CL:0000134;1.32e-10;55!CL:0000569;3.05e-10;4!CL:1000306;3.16e-10;4!CL:0002547;3.16e-10;4!CL:0000136;9.63e-10;13!CL:0002615;1.89e-09;3!CL:0000135;6.17e-09;3!CL:0002579;6.17e-09;3!CL:0000388;6.17e-09;3!CL:0000048;9.03e-09;58!CL:0002580;1.54e-08;3!CL:0000197;9.05e-08;6!CL:0000098;9.05e-08;6!CL:0002167;9.05e-08;6!CL:0000723;1.61e-07;61!CL:0000034;7.52e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.78e-20,12;CL:0000057,1.70e-15,76;CL:0000134,2.00e-11,354;CL:0000048,5.06e-11,427;CL:0002320,6.30e-11,361;CL:0000723,1.18e-10,433;CL:0000136,1.74e-10,15;CL:0000569,1.91e-10,4;CL:0000011,1.91e-10,4;CL:1000306,3.39e-10,4;CL:0002547,3.39e-10,4;CL:0000034,3.54e-10,441;CL:0000219,8.99e-10,386;CL:0002615,2.09e-09,3;CL:0002579,4.83e-09,3;CL:0000135,5.23e-09,3;CL:0000388,5.23e-09,3;CL:0002580,1.83e-08,3;CL:0000197,8.93e-08,6;CL:0000098,8.93e-08,6;CL:0002167,8.93e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000011;3.05e-10;4 | |ontology_enrichment_development_v019=CL:0000011;3.05e-10;4 | ||
|ontology_enrichment_disease=DOID:2394!1.94e-10!14 | |ontology_enrichment_disease=DOID:2394!1.94e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.68e-16;14!DOID:120;1.55e-07;27!DOID:193;7.04e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;1.68e-16;14!DOID:120;1.55e-07;27!DOID:193;7.04e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.23e-16,14;DOID:120,1.34e-07,27;DOID:193,6.16e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.57e-10!45;UBERON:0002416!7.57e-10!45;UBERON:0003102!2.17e-09!95;UBERON:0003688!2.81e-08!6;UBERON:0002358!2.81e-08!6;UBERON:0003684!2.81e-08!6;UBERON:0001178!2.81e-08!6;UBERON:0000486!1.14e-07!82;UBERON:0000914!1.30e-07!83;UBERON:0002329!1.30e-07!83;UBERON:0003077!1.30e-07!83;UBERON:0003059!1.30e-07!83;UBERON:0007282!1.30e-07!83;UBERON:0009618!1.30e-07!83;UBERON:0007285!1.30e-07!83;UBERON:0002097!5.26e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!7.57e-10!45;UBERON:0002416!7.57e-10!45;UBERON:0003102!2.17e-09!95;UBERON:0003688!2.81e-08!6;UBERON:0002358!2.81e-08!6;UBERON:0003684!2.81e-08!6;UBERON:0001178!2.81e-08!6;UBERON:0000486!1.14e-07!82;UBERON:0000914!1.30e-07!83;UBERON:0002329!1.30e-07!83;UBERON:0003077!1.30e-07!83;UBERON:0003059!1.30e-07!83;UBERON:0007282!1.30e-07!83;UBERON:0009618!1.30e-07!83;UBERON:0007285!1.30e-07!83;UBERON:0002097!5.26e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.21e-18;9!UBERON:0000042;1.21e-18;9!UBERON:0003688;1.11e-16;6!UBERON:0002358;1.11e-16;6!UBERON:0003684;1.11e-16;6!UBERON:0001178;1.11e-16;6!UBERON:0004797;3.16e-10;4!UBERON:0000415;3.16e-10;4!UBERON:0007240;3.16e-10;4!UBERON:0005742;3.16e-10;4!UBERON:0005734;3.16e-10;4!UBERON:0004664;3.16e-10;4!UBERON:0004663;3.16e-10;4!UBERON:0007846;6.17e-09;3!UBERON:0000043;6.17e-09;3!UBERON:0007845;6.17e-09;3!UBERON:0002118;3.41e-08;5!UBERON:0005406;6.54e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.21e-18;9!UBERON:0000042;1.21e-18;9!UBERON:0003688;1.11e-16;6!UBERON:0002358;1.11e-16;6!UBERON:0003684;1.11e-16;6!UBERON:0001178;1.11e-16;6!UBERON:0004797;3.16e-10;4!UBERON:0000415;3.16e-10;4!UBERON:0007240;3.16e-10;4!UBERON:0005742;3.16e-10;4!UBERON:0005734;3.16e-10;4!UBERON:0004664;3.16e-10;4!UBERON:0004663;3.16e-10;4!UBERON:0007846;6.17e-09;3!UBERON:0000043;6.17e-09;3!UBERON:0007845;6.17e-09;3!UBERON:0002118;3.41e-08;5!UBERON:0005406;6.54e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.56e-17,6;UBERON:0002358,9.56e-17,6;UBERON:0003684,9.56e-17,6;UBERON:0001178,9.56e-17,6;UBERON:0004457,1.59e-13,12;UBERON:0000042,1.59e-13,12;UBERON:0002384,1.26e-11,371;UBERON:0000415,3.39e-10,4;UBERON:0007240,3.39e-10,4;UBERON:0005742,3.39e-10,4;UBERON:0005734,3.39e-10,4;UBERON:0004664,3.39e-10,4;UBERON:0004663,3.39e-10,4;UBERON:0007846,5.23e-09,3;UBERON:0000043,5.23e-09,3;UBERON:0007845,5.23e-09,3;UBERON:0002118,3.56e-08,5;UBERON:0004458,3.08e-07,49;UBERON:0004923,4.83e-07,66;UBERON:0005406,6.47e-07,2 | |||
|phase1_expression=3.27021082687002,2.14100523890983,4.22863212287913,4.00293193412522,7.59833860526389,13.9574163856059,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,1.39293562831038,1.19168262731897,6.02356903572509,1.41867352879343,0,1.06748995729705,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0,0.312160076830321,0,1.34503812496621,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,2.22540236350701,0,0,0,0,0,0,0.30648779579902,1.05166641234618,0.113432183160021,0.538168907066586,0.427114777637135,0,0.300091096084402,0.103052529238439,2.06112432036503,1.48893485065272,0.675105328965065,0.0974370051611986,0.757301322732344,0.368199594569197,0.323292113637624,1.77504796258307,0.403008392910561,0.169560592310488,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0.904760751704678,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,1.68053230485111,0,0,2.12750493267896,1.04007436911366,0,0,0,0.714889968290738,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,4.15941723061614,6.0665856191035,4.88877486605197,2.34282829985426,0,2.27407504055985,0,3.32112799267718,0.184369168541703,0.955719759148911,0,0,0,0,0,0,0,0,2.23297027036899,1.2276957863045,5.05188169979532,6.40695746278505,1.53512174720011,9.32952742632923,4.45254199334973,1.23367755042124,1.9531789784444,0.9033987161519,2.59627214591811,0.929683027679674,0,0.601519410909855,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.460511024178389,0,0.107420244868274,0.290033387828457,0.0852266274161009,1.15741646340759,0,0,0,0.10115778085555,0.464845549297286,2.20368642781448,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,1.58189712359363,0.571890581771475,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,1.21856744815642,1.05650146756755,0.136499911407986,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0,0.281695602532241,0,0.392996164052485,0.35667105148125,0.354761064070598,1.05553817648832,4.61012850143863,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,1.59398390600856,0,0,0,0,2.48831670129446,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.91153644677601,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.523014231561666,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.87426823963964,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,1.51649117541648,0,0,0,0,2.08956724041624,3.97312626740282,0,0.378806010550178,1.25783950876288,0,2.97492088916001,2.7221566277383,1.5543720058278,1.18284119991707,0.796483835818512,0.449803112163605,1.55262956876259,2.90294345488599,6.11435943483388,2.08698024724694,2.55437935295271,2.66563648518157,2.44122439922797,2.00033525122815,1.8259794697223,0,1.19428766609585,0.800055529326307,1.37358282073117,0,0,0,0,0.260994291965212,0.226705925512272,2.77826969188601,0,0.71635536432595,0.926404341482917,3.72782884283802,0,2.31496845925098,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,7.75887076119505,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,2.97596014533401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| ||
|short_description=p@chr6:169616396..169616409,- | |short_description=p@chr6:169616396..169616409,- | ||
}} | }} |
Revision as of 00:50, 16 November 2012
Short description: | p@chr6:169616396..169616409, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:169616396..169616409, - |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.78e-20 | 12 |
fibroblast | 1.70e-15 | 76 |
mesenchymal cell | 2.00e-11 | 354 |
multi fate stem cell | 5.06e-11 | 427 |
connective tissue cell | 6.30e-11 | 361 |
somatic stem cell | 1.18e-10 | 433 |
fat cell | 1.74e-10 | 15 |
cardiac mesenchymal cell | 1.91e-10 | 4 |
migratory trunk neural crest cell | 1.91e-10 | 4 |
fibroblast of tunica adventitia of artery | 3.39e-10 | 4 |
fibroblast of the aortic adventitia | 3.39e-10 | 4 |
stem cell | 3.54e-10 | 441 |
motile cell | 8.99e-10 | 386 |
adipocyte of omentum tissue | 2.09e-09 | 3 |
omentum preadipocyte | 4.83e-09 | 3 |
fibrocyte | 5.23e-09 | 3 |
tendon cell | 5.23e-09 | 3 |
preadipocyte of the breast | 1.83e-08 | 3 |
receptor cell | 8.93e-08 | 6 |
sensory epithelial cell | 8.93e-08 | 6 |
olfactory epithelial cell | 8.93e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.56e-17 | 6 |
peritoneum | 9.56e-17 | 6 |
abdominal cavity | 9.56e-17 | 6 |
visceral peritoneum | 9.56e-17 | 6 |
cavity lining | 1.59e-13 | 12 |
serous membrane | 1.59e-13 | 12 |
connective tissue | 1.26e-11 | 371 |
artery wall | 3.39e-10 | 4 |
tunica adventitia of artery | 3.39e-10 | 4 |
adventitia | 3.39e-10 | 4 |
tunica adventitia of blood vessel | 3.39e-10 | 4 |
aorta tunica adventitia | 3.39e-10 | 4 |
aorta wall | 3.39e-10 | 4 |
dense regular connective tissue | 5.23e-09 | 3 |
tendon | 5.23e-09 | 3 |
regular connective tissue | 5.23e-09 | 3 |
right ovary | 3.56e-08 | 5 |
body cavity or lining | 3.08e-07 | 49 |
organ component layer | 4.83e-07 | 66 |
perirenal fat | 6.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.23e-16 | 14 |
female reproductive organ cancer | 1.34e-07 | 27 |
reproductive organ cancer | 6.16e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.