UBERON:0003022: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603 | ||
| | |anatomical_img_id=FMA:68603 | ||
|comment=check w.r.t regional part of cerebreal cortex | |comment=check w.r.t regional part of cerebreal cortex | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003022 | |||
|is_a=UBERON:0002619 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lobe parts of cerebral cortex | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="cerebral cortical segment" RELATED [FMA:68603];;"regional organ part of cerebral cortex" RELATED [FMA:68603];;"segment of cerebral cortex" RELATED [NIF_GrossAnatomy:birnlex_922] | ||
|union_of= | |||
|xref=FMA:68603;;NIF_GrossAnatomy:birnlex_922 | |||
}} | }} | ||
Latest revision as of 18:43, 29 November 2012
| Name: | lobe parts of cerebral cortex | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"cerebral cortical segment" RELATED [FMA:68603] "regional organ part of cerebral cortex" RELATED [FMA:68603] "segment of cerebral cortex" RELATED [NIF_GrossAnatomy:birnlex_922] | ||
| Comments: | check w.r.t regional part of cerebreal cortex | ||
| Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002619(regional part of cerebral cortex) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10153-102I9 (hippocampus, adult, donor10252)
- 10169-103B7 (hippocampus - adult, donor10196)
- 10363-105F3 (hippocampus, newborn, donor10223)
- 10374-105G5 (hippocampus, adult, donor10258)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
- 11721-123D2 (Mouse Neurons - hippocampal, donor1)
- 11739-123F2 (Mouse Neurons - hippocampal, donor2)
... further results Mouse (Mus musculus)
- 10153-102I9 (hippocampus, adult, donor10252)
- 10169-103B7 (hippocampus - adult, donor10196)
- 10363-105F3 (hippocampus, newborn, donor10223)
- 10374-105G5 (hippocampus, adult, donor10258)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
- 11721-123D2 (Mouse Neurons - hippocampal, donor1)
- 11739-123F2 (Mouse Neurons - hippocampal, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003022 (lobe parts of cerebral cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.68e-99 | FFCP PHASE1:Hg19::chr2:149881275..149881284,+#_a746f1df189c7ff6455c4f9d6f0b6d01 | p@chr2:149881275..149881284, + |
| 5.68e-99 | FFCP PHASE2:Hg19::chrX:148561320..148561329,-#_a746f1df189c7ff6455c4f9d6f0b6d01 | p@chrX:148561320..148561329, - |
| 5.68e-99 | FFCP PHASE1:Hg19::chrX:148561320..148561329,-#_a746f1df189c7ff6455c4f9d6f0b6d01 | p@chrX:148561320..148561329, - |
| 5.68e-99 | FFCP PHASE2:Hg19::chr2:149881275..149881284,+#_a746f1df189c7ff6455c4f9d6f0b6d01 | p@chr2:149881275..149881284, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:110464144..110464149,+#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chrX:110464144..110464149, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:187628574..187628585,+#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chr2:187628574..187628585, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:187628574..187628585,+#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chr2:187628574..187628585, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:132937900..132937907,-#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chr6:132937900..132937907, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:132937900..132937907,-#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chr6:132937900..132937907, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:110464144..110464149,+#_e9000b48285c4bcf6c7ba60eb0f04f37 | p@chrX:110464144..110464149, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr3:71777824..71777833,-#_a362e69fce3aedac1970ef57a6f2c919 | p28@EIF4E3 |
| 4.22e-98 | FFCP PHASE1:Hg19::chr11:79784329..79784335,-#_a362e69fce3aedac1970ef57a6f2c919 | p@chr11:79784329..79784335, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr3:172166557..172166598,+#_a362e69fce3aedac1970ef57a6f2c919 | p@chr3:172166557..172166598, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr11:79784329..79784335,-#_a362e69fce3aedac1970ef57a6f2c919 | p@chr11:79784329..79784335, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr3:71777824..71777833,-#_a362e69fce3aedac1970ef57a6f2c919 | p28@EIF4E3 |
| 4.22e-98 | FFCP PHASE2:Hg19::chr5:119669127..119669137,-#_a362e69fce3aedac1970ef57a6f2c919 | p4@ENST00000514240 |
| 4.22e-98 | FFCP PHASE1:Hg19::chr5:119669127..119669137,-#_a362e69fce3aedac1970ef57a6f2c919 | p4@ENST00000514240 |
| 4.22e-98 | FFCP PHASE2:Hg19::chr3:172166557..172166598,+#_a362e69fce3aedac1970ef57a6f2c919 | p@chr3:172166557..172166598, + |
| 7.79e-79 | FFCP PHASE2:Hg19::chr18:24435190..24435201,-#_8d3dd156575fead153b2fc0d6d0c2737 | p@chr18:24435190..24435201, - |
| 7.79e-79 | FFCP PHASE1:Hg19::chr18:24435190..24435201,-#_8d3dd156575fead153b2fc0d6d0c2737 | p@chr18:24435190..24435201, - |
| 7.41e-67 | FFCP PHASE2:Hg19::chr10:125454018..125454027,+#_60a883c40c41b3a247e915c949337ed5 | p@chr10:125454018..125454027, + |
| 7.41e-67 | FFCP PHASE1:Hg19::chr10:125454018..125454027,+#_60a883c40c41b3a247e915c949337ed5 | p@chr10:125454018..125454027, + |
| 1.04e-66 | FFCP PHASE1:Hg19::chr3:12225071..12225084,+#_85b4f581f72edd700e10470e5d2c08a4 | p15@SYN2 |
| 1.04e-66 | FFCP PHASE2:Hg19::chr3:12225071..12225084,+#_85b4f581f72edd700e10470e5d2c08a4 | p15@SYN2 |
| 7.73e-66 | FFCP PHASE2:Hg19::chrX:72432586..72432597,-#_e07256af20a3e9c7e1bca84bbedf4485 | p@chrX:72432586..72432597, - |
| 7.73e-66 | FFCP PHASE1:Hg19::chrX:72432586..72432597,-#_e07256af20a3e9c7e1bca84bbedf4485 | p@chrX:72432586..72432597, - |
| 2.02e-57 | FFCP PHASE2:Hg19::chr7:130745294..130745303,-#_8ff7fa9736ba45ae198585c60e266867 | p@chr7:130745294..130745303, - |
| 2.02e-57 | FFCP PHASE2:Hg19::chrX:13789306..13789315,-#_8ff7fa9736ba45ae198585c60e266867 | p@chrX:13789306..13789315, - |
| 2.02e-57 | FFCP PHASE1:Hg19::chr7:130745294..130745303,-#_8ff7fa9736ba45ae198585c60e266867 | p@chr7:130745294..130745303, - |
| 2.02e-57 | FFCP PHASE1:Hg19::chrX:13789306..13789315,-#_8ff7fa9736ba45ae198585c60e266867 | p@chrX:13789306..13789315, - |
| 2.69e-57 | FFCP PHASE2:Hg19::chr19:49932793..49932820,-#_f4358a6040f8413ad35fd27c5bdf1730 | p@chr19:49932793..49932820, - |
| 2.69e-57 | FFCP PHASE1:Hg19::chr19:49932793..49932820,-#_f4358a6040f8413ad35fd27c5bdf1730 | p@chr19:49932793..49932820, - |
| 3.58e-57 | FFCP PHASE1:Hg19::chr5:111964224..111964247,+#_b74bcbd889f5308e0fae9d665866903b | p1@ENST00000507565 |
| 3.58e-57 | FFCP PHASE2:Hg19::chr2:79601075..79601083,+#_b74bcbd889f5308e0fae9d665866903b | p@chr2:79601075..79601083, + |
| 3.58e-57 | FFCP PHASE1:Hg19::chr2:79601075..79601083,+#_b74bcbd889f5308e0fae9d665866903b | p@chr2:79601075..79601083, + |
| 3.58e-57 | FFCP PHASE2:Hg19::chr5:111964224..111964247,+#_b74bcbd889f5308e0fae9d665866903b | p1@ENST00000507565 |
| 4.77e-57 | FFCP PHASE1:Hg19::chr7:22158177..22158186,-#_039c0598939d52a5eeeb49f8331d5923 | p@chr7:22158177..22158186, - |
| 4.77e-57 | FFCP PHASE2:Hg19::chr7:22158177..22158186,-#_039c0598939d52a5eeeb49f8331d5923 | p@chr7:22158177..22158186, - |
| 6.36e-57 | FFCP PHASE2:Hg19::chr8:42981738..42981749,+#_8041705ce46635c9f7ae1205f7b08aac | p4@AK056481 |
| 6.36e-57 | FFCP PHASE1:Hg19::chr8:42981738..42981749,+#_8041705ce46635c9f7ae1205f7b08aac | p4@AK056481 |
| 8.82e-51 | FFCP PHASE1:Hg19::chr5:82155710..82155724,-#_08a6a98a9ed8ca23df070b66f4eda525 | p@chr5:82155710..82155724, - |
| 8.82e-51 | FFCP PHASE2:Hg19::chr5:82155710..82155724,-#_08a6a98a9ed8ca23df070b66f4eda525 | p@chr5:82155710..82155724, - |
| 1.14e-50 | FFCP PHASE2:Hg19::chr17:27901500..27901511,-#_74ae1188db941072837a6b186d51d84f | p25@GIT1 |
| 1.14e-50 | FFCP PHASE1:Hg19::chr17:27901500..27901511,-#_74ae1188db941072837a6b186d51d84f | p25@GIT1 |
| 1.14e-50 | FFCP PHASE1:Hg19::chr15:43814895..43814906,+#_74ae1188db941072837a6b186d51d84f | p35@MAP1A |
| 1.14e-50 | FFCP PHASE2:Hg19::chr15:43814895..43814906,+#_74ae1188db941072837a6b186d51d84f | p35@MAP1A |
| 2.42e-50 | FFCP PHASE1:Hg19::chr13:101712292..101712306,-#_7f66526b53d49f7552ed10a8e4133bcb | p@chr13:101712292..101712306, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr13:101712292..101712306,-#_7f66526b53d49f7552ed10a8e4133bcb | p@chr13:101712292..101712306, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr19:49932741..49932746,-#_20344be9ad63f53189d277fd21300c93 | p@chr19:49932741..49932746, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr3:131756644..131756651,-#_20344be9ad63f53189d277fd21300c93 | p13@CPNE4 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:7240507..7240509,+#_20344be9ad63f53189d277fd21300c93 | p@chr16:7240507..7240509, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr19:49932741..49932746,-#_20344be9ad63f53189d277fd21300c93 | p@chr19:49932741..49932746, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:7240507..7240509,+#_20344be9ad63f53189d277fd21300c93 | p@chr16:7240507..7240509, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr3:131756632..131756637,-#_20344be9ad63f53189d277fd21300c93 | p11@CPNE4 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr3:131756644..131756651,-#_20344be9ad63f53189d277fd21300c93 | p13@CPNE4 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr3:131756632..131756637,-#_20344be9ad63f53189d277fd21300c93 | p11@CPNE4 |
| 3.11e-50 | FFCP PHASE1:Hg19::chr11:123502588..123502633,-#_8dd9cfe84d84ddc95c55b90eeeba0d42 | p16@SCN3B |
| 3.11e-50 | FFCP PHASE2:Hg19::chr11:123502588..123502633,-#_8dd9cfe84d84ddc95c55b90eeeba0d42 | p16@SCN3B |
| 4.0e-50 | FFCP PHASE2:Hg19::chr3:58552313..58552322,-#_2d9384da9a1032d98f8c9fa0b8f131f7 | p@chr3:58552313..58552322, - |
| 4.0e-50 | FFCP PHASE1:Hg19::chr3:58552313..58552322,-#_2d9384da9a1032d98f8c9fa0b8f131f7 | p@chr3:58552313..58552322, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:99772065..99772074,+#_fadee4c3621700073231556fa0338938 | p13@LPPR4 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr8:26365361..26365372,-#_fadee4c3621700073231556fa0338938 | p5@PNMA2 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr21:27650939..27650945,-#_fadee4c3621700073231556fa0338938 | p@chr21:27650939..27650945, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr18:24433388..24433397,-#_fadee4c3621700073231556fa0338938 | p20@AQP4 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr18:24433388..24433397,-#_fadee4c3621700073231556fa0338938 | p20@AQP4 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:99772065..99772074,+#_fadee4c3621700073231556fa0338938 | p13@LPPR4 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr21:27651095..27651104,+#_fadee4c3621700073231556fa0338938 | p@chr21:27651095..27651104, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr8:81570615..81570619,-#_fadee4c3621700073231556fa0338938 | p@chr8:81570615..81570619, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chrX:152095682..152095708,-#_fadee4c3621700073231556fa0338938 | p@chrX:152095682..152095708, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr21:27651095..27651104,+#_fadee4c3621700073231556fa0338938 | p@chr21:27651095..27651104, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chrX:152095682..152095708,-#_fadee4c3621700073231556fa0338938 | p@chrX:152095682..152095708, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr7:98460933..98460941,-#_fadee4c3621700073231556fa0338938 | p19@TMEM130 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr8:81570615..81570619,-#_fadee4c3621700073231556fa0338938 | p@chr8:81570615..81570619, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr20:44330800..44330802,-#_fadee4c3621700073231556fa0338938 | p@chr20:44330800..44330802, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr21:27650939..27650945,-#_fadee4c3621700073231556fa0338938 | p@chr21:27650939..27650945, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr8:26365361..26365372,-#_fadee4c3621700073231556fa0338938 | p5@PNMA2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr19:4772190..4772197,+#_fadee4c3621700073231556fa0338938 | p@chr19:4772190..4772197, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr20:44330800..44330802,-#_fadee4c3621700073231556fa0338938 | p@chr20:44330800..44330802, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr7:98460933..98460941,-#_fadee4c3621700073231556fa0338938 | p19@TMEM130 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr19:4772190..4772197,+#_fadee4c3621700073231556fa0338938 | p@chr19:4772190..4772197, + |
| 5.15e-50 | FFCP PHASE2:Hg19::chr14:24037817..24037858,-#_df8e900e8e447d48bfbb74f0d3bbc443 | p@chr14:24037817..24037858, - |
| 5.15e-50 | FFCP PHASE1:Hg19::chr14:24037817..24037858,-#_df8e900e8e447d48bfbb74f0d3bbc443 | p@chr14:24037817..24037858, - |
| 6.61e-50 | FFCP PHASE2:Hg19::chr12:41234328..41234338,+#_9c2a841d465d9cbb824ec5655da09742 | p@chr12:41234328..41234338, + |
| 6.61e-50 | FFCP PHASE1:Hg19::chr12:41234328..41234338,+#_9c2a841d465d9cbb824ec5655da09742 | p@chr12:41234328..41234338, + |
| 3.19e-45 | FFCP PHASE1:Hg19::chr12:79843202..79843213,+#_233250377290c96e1c701c902a09c2ae | p@chr12:79843202..79843213, + |
| 3.19e-45 | FFCP PHASE1:Hg19::chr19:3294647..3294651,+#_233250377290c96e1c701c902a09c2ae | p@chr19:3294647..3294651, + |
| 3.19e-45 | FFCP PHASE2:Hg19::chr12:79843202..79843213,+#_233250377290c96e1c701c902a09c2ae | p@chr12:79843202..79843213, + |
| 3.19e-45 | FFCP PHASE2:Hg19::chr19:3294647..3294651,+#_233250377290c96e1c701c902a09c2ae | p@chr19:3294647..3294651, + |
| 6.26e-45 | FFCP PHASE1:Hg19::chr9:87426979..87426990,+#_4f911fc007a7e6640f8611b6b8cade19 | p54@NTRK2 |
| 6.26e-45 | FFCP PHASE2:Hg19::chr5:63258078..63258088,-#_4f911fc007a7e6640f8611b6b8cade19 | p6@HTR1A |
| 6.26e-45 | FFCP PHASE2:Hg19::chr8:27316567..27316576,+#_4f911fc007a7e6640f8611b6b8cade19 | p@chr8:27316567..27316576, + |
| 6.26e-45 | FFCP PHASE1:Hg19::chr5:63258078..63258088,-#_4f911fc007a7e6640f8611b6b8cade19 | p6@HTR1A |
| 6.26e-45 | FFCP PHASE1:Hg19::chr8:27316567..27316576,+#_4f911fc007a7e6640f8611b6b8cade19 | p@chr8:27316567..27316576, + |
| 6.26e-45 | FFCP PHASE2:Hg19::chr9:87426979..87426990,+#_4f911fc007a7e6640f8611b6b8cade19 | p54@NTRK2 |
| 7.83e-45 | FFCP PHASE1:Hg19::chr1:160112787..160112798,+#_144f3e6bcc962952391c46e6f1bc9d34 | p12@ATP1A2 |
| 7.83e-45 | FFCP PHASE1:Hg19::chr5:63258105..63258124,-#_144f3e6bcc962952391c46e6f1bc9d34 | p2@HTR1A |
| 7.83e-45 | FFCP PHASE2:Hg19::chr2:101965038..101965076,-#_144f3e6bcc962952391c46e6f1bc9d34 | p@chr2:101965038..101965076, - |
| 7.83e-45 | FFCP PHASE1:Hg19::chr2:101965038..101965076,-#_144f3e6bcc962952391c46e6f1bc9d34 | p@chr2:101965038..101965076, - |
| 7.83e-45 | FFCP PHASE2:Hg19::chr1:160112787..160112798,+#_144f3e6bcc962952391c46e6f1bc9d34 | p12@ATP1A2 |
| 7.83e-45 | FFCP PHASE2:Hg19::chr5:63258105..63258124,-#_144f3e6bcc962952391c46e6f1bc9d34 | p2@HTR1A |
