NonredundantMotifs:97: Difference between revisions
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|entrez_gene_id=25988
|motif_cluster_2013_march_motif_members= /JASPAR:MA0131.1;MIZF /HOCOMOCO:HINFP_f1
|name=known97
|representative_motif_db=HOCOMOCO
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;13.746859666221109;2.762561335115522;16.71859666221121;8.77198233645216!2;14.02198233645216;16.025122670231053;5.943473991980154;6.0094210013366345!3;1.9371933244223867;17.05966634179874;20.03140333778879;2.971736995990073!4;8.012561335115526;15.056526008019844;6.97801766354784;11.952894993316788!5;10.015701668894417;10.015701668894417;2.971736995990073;18.99685966622111!6;19.899509319075836;13.053385674240953;7.04396467290432;2.0031403337788793!7;6.97801766354784;4.974877329768948;24.10363101470306;5.943473991980154!8;2.971736995990073;39.02826300400994;0.0;0.0!9;0.0;0.0;42.0;0.0!10;2.0031403337788793;0.9685966622111933;39.02826300400994;0.0!11;40.96545632843232;1.034543671567686;0.0;0.0!12;0.0;39.996859666221106;2.0031403337788793;0.0!13;0.0;2.971736995990073;35.990578998663366;3.0376840053465695!14;0.9685966622111933;0.0;0.0;41.031403337788795!15;8.078508344472006;0.9685966622111933;4.908930320412468;28.04396467290432!16;16.21781157876646;11.308881258354036;11.242934248997514;3.2303729138819963 | |||
|entrez_gene_id=25988 | |entrez_gene_id=25988 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0131.1;MIZF /HOCOMOCO:HINFP_f1 | |motif_cluster_2013_march_motif_members= /JASPAR:MA0131.1;MIZF /HOCOMOCO:HINFP_f1 | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known97
- db :HOCOMOCO
- Id :HINFP_f1
- name :
- score :0.25539944665495656
- External refs:
- Internal refs:
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Sub Motif Members
