NonredundantMotifs:100

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known100
• db :UNIPROBE
• Id :Sp4_secondary
• name :SCI09
• score :1.1796062082368315
  
• External refs:

EntrezGene:6671
UniProt:6671

• Internal refs:

EntrezGene:6671

Motif matrix

P0 A C G T 1 0.146334023119284 0.312325597002158 0.244280601437075 0.297059778441483 2 0.493155383150446 0.0926092319702565 0.162506333314667 0.25172905156463 3 0.503592857967289 0.0598625691467358 0.0775608807031628 0.358983692182812 4 0.763321236911991 0.0152640847274256 0.213113532750624 0.00830114560995977 5 0.0124152933433829 0.0259324823928593 0.94550161178228 0.0161506124814777 6 0.00671265218803224 0.0152208224592375 0.95009806626886 0.0279684590838698 7 0.0624149295728282 0.834302710434987 0.0545000523171742 0.048782307675011 8 0.011009794281707 0.0206765064998617 0.928820571547922 0.0394931276705095 9 0.0127852825584847 0.0241624261199451 0.145821531650822 0.817230759670749 10 0.133595087758648 0.0339621383800899 0.787876170857959 0.0445666030033028 11 0.140696831265335 0.180480862797504 0.428252547296935 0.250569758640227 12 0.0362805809769257 0.806411569004042 0.0335104472596395 0.123797402759393 13 0.157910409531115 0.408607000263642 0.122427178461432 0.31105541174381 14 0.292185093316507 0.260016972273344 0.197515406696606 0.250282527713542 15 0.251107068488547 0.124479516647001 0.359446652983103 0.264966761881349