NonredundantMotifs:110: Difference between revisions
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|entrez_gene_id=2627
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gata6_secondary;SCI09~Gata5_secondary;SCI09
|name=known110
|representative_motif_db=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.0960368996419155;0.0787199781544717;0.658870944690142;0.166372177513471!2;0.0994728560653716;0.47219999758005;0.272163978410855;0.156163167943723!3;0.14872719105279;0.227077886459852;0.409637274466778;0.214557648020579!4;0.280786549503952;0.217654175450364;0.322181237007478;0.179378038038206!5;0.108784342425927;0.723506349252304;0.0809698824228468;0.0867394258989229!6;0.0581708359344613;0.0441019298464845;0.8182698582786;0.0794573759404547!7;0.681346099814647;0.227585810877465;0.0645006879453407;0.0265674013625475!8;0.0262257922834263;0.00747058984524598;0.0700401210015426;0.896263496869785!9;0.896263496869785;0.0700401210015426;0.00747058984524598;0.0262257922834263!10;0.0265674013625475;0.0645006879453407;0.227585810877465;0.681346099814647!11;0.0794573759404547;0.8182698582786;0.0441019298464845;0.0581708359344613!12;0.0867394258989229;0.0809698824228468;0.723506349252304;0.108784342425927!13;0.0818534077052605;0.508630519709729;0.267910525739667;0.141605546845344!14;0.43859863745905;0.302966685076604;0.195554139689766;0.0628805377745799!15;0.0914132380443896;0.182314770498885;0.581418443717068;0.144853547739657!16;0.142535225750042;0.490839659665815;0.0738030604052205;0.292822054178923!17;0.254672750477746;0.169950594399545;0.289663955543823;0.285712699578887 | |||
|entrez_gene_id=2627 | |entrez_gene_id=2627 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gata6_secondary;SCI09~Gata5_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Gata6_secondary;SCI09~Gata5_secondary;SCI09 | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known110
- db :UNIPROBE
- Id :Gata6_secondary
- name :SCI09
- score :0.9063094472438954
- External refs:
- Internal refs:
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Sub Motif Members
