NonredundantMotifs:128: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=10127
|motif_cluster_2013_march_motif_members= /HOMER:ZNF263_K562-Znf263-ChIP-Seq /UNIPROBE:Zfp691_primary;SCI09
|name=known128
|representa...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=PO;A;C;G;T!1;2894;7864;4608;3675!2;6340;4570;5884;2247!3;95;6360;12567;19!4;19;19;19;18984!5;19;9749;9254;19!6;19;18984;19;19!7;19;19;19;18984!8;19;18984;19;19!9;19;18984;19;19!10;2628;12510;38;3865 | |||
|entrez_gene_id=10127 | |entrez_gene_id=10127 | ||
|motif_cluster_2013_march_motif_members= /HOMER:ZNF263_K562-Znf263-ChIP-Seq /UNIPROBE:Zfp691_primary;SCI09 | |motif_cluster_2013_march_motif_members= /HOMER:ZNF263_K562-Znf263-ChIP-Seq /UNIPROBE:Zfp691_primary;SCI09 | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known128
- db :HOMER
- Id :ZNF263_K562-Znf263-ChIP-Seq
- name :
- score :1.1540519222583132
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
