NonredundantMotifs:89: Difference between revisions
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|PWM=P0;A;C;G;T!1;355.1164179681543;872.9135931285866;229.05286307430117;142.43630851119804!2;1453.8878953041276;39.405312043040794;60.76718830742915;45.458787027639595!3;1437.2301000628477;59.07278819398952;41.03769678615428;62.1785976392452!4;452.2681057053963;264.446438084949;752.2975098199706;130.50712907192346!5;1589.7152757844658;5.158343788844059;0.0;4.64556310892588!6;2.683134803964476;0.0;0.8219170657205994;1596.0141308125508!7;1.751490774810144;0.0;1597.7676919074256;0.0!8;45.58822914749756;1.0206677919401903;1522.8715407647107;30.038744978087912!9;205.01100167817054;1217.7380393283668;20.432130529399814;156.33801114630236!10;162.0336025293721;313.46325125529927;934.2913102164242;189.73101868114384!11;215.16543492570273;185.59382165677596;998.427142418638;200.33278368112224!12;217.483463797109;1043.9855089015196;161.5696235328511;176.48058645075952 | |PWM=P0;A;C;G;T!1;355.1164179681543;872.9135931285866;229.05286307430117;142.43630851119804!2;1453.8878953041276;39.405312043040794;60.76718830742915;45.458787027639595!3;1437.2301000628477;59.07278819398952;41.03769678615428;62.1785976392452!4;452.2681057053963;264.446438084949;752.2975098199706;130.50712907192346!5;1589.7152757844658;5.158343788844059;0.0;4.64556310892588!6;2.683134803964476;0.0;0.8219170657205994;1596.0141308125508!7;1.751490774810144;0.0;1597.7676919074256;0.0!8;45.58822914749756;1.0206677919401903;1522.8715407647107;30.038744978087912!9;205.01100167817054;1217.7380393283668;20.432130529399814;156.33801114630236!10;162.0336025293721;313.46325125529927;934.2913102164242;189.73101868114384!11;215.16543492570273;185.59382165677596;998.427142418638;200.33278368112224!12;217.483463797109;1043.9855089015196;161.5696235328511;176.48058645075952 | ||
|entrez_gene_id=7528 | |entrez_gene_id=7528 | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /JASPAR:MA0095.1;YY1 /SWISSREGULON:YY1.p2 /HOCOMOCO:TYY1_f2 | ||
|name=known89 | |name=known89 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
Revision as of 12:09, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known89
- db :HOCOMOCO
- Id :TYY1_f2
- name :
- score :0.30566608958087693
- External refs:
- Internal refs:
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Sub Motif Members
