NonredundantMotifs:92: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=26298
|motif_cluster_2013_march_motif_members= /UNIPROBE:Spdef_secondary;SCI09~Ehf_secondary;SCI09
|name=known92
|representative_motif_db=UN...") |
m (Autoedit moved page NonredundantMotifs:Motif92 to NonredundantMotifs:92 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.307205449641049;0.0344403890426423;0.106634540836892;0.551719620479416!2;0.363403243233031;0.109044142230046;0.17856446992701;0.348988144609913!3;0.296409407130807;0.24117861044179;0.359665963655812;0.10274601877159!4;0.239303873131386;0.113814504212511;0.274725179032767;0.372156443623336!5;0.742403884016689;0.0631584331040275;0.121573339524976;0.0728643433543076!6;0.160692130209469;0.233592494644163;0.260062089602388;0.34565328554398!7;0.0739993485727812;0.0140067450967934;0.0124863051117326;0.899507601218693!8;0.0748741475479536;0.0142981196428488;0.00990660158489079;0.900921131224307!9;0.0226232825278555;0.925965762010393;0.00837783813856089;0.0430331173231908!10;0.0277226237873368;0.921907334033197;0.020087634386389;0.0302824077930776!11;0.0294049577618867;0.0749652431289942;0.595499771077043;0.300130028032077!12;0.776422141224345;0.0830244896396168;0.0411239188937361;0.0994294502423021!13;0.270188455209809;0.158044253461694;0.134940007818918;0.436827283509579!14;0.0705636289787253;0.545506140789296;0.345463273323811;0.0384669569081674!15;0.31696167362289;0.128938244021521;0.151825700313154;0.402274382042435!16;0.327940123975001;0.106122152287044;0.104096865613508;0.461840858124447 | |||
|entrez_gene_id=26298 | |entrez_gene_id=26298 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Spdef_secondary;SCI09~Ehf_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Spdef_secondary;SCI09~Ehf_secondary;SCI09 | ||
|name= | |name=non-redundant92 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Ehf_secondary | |representative_motif_id=Ehf_secondary | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant92
- db :UNIPROBE
- Id :Ehf_secondary
- name :SCI09
- score :0.04791293325516849
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
