NonredundantMotifs:134: Difference between revisions
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|entrez_gene_id=8880
|motif_cluster_2013_march_motif_members= /HOCOMOCO:FUBP1_f1
|name=known134
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.24374999999999988;16.710416666666642;3.168749999999995;82.25208333333329!2;0.0;48.74999999999998;1.9499999999999953;51.67500000000002!3;0.0;0.0;100.4249999999999;1.9499999999999953!4;0.0;0.0;3.03333333333333;99.34166666666653!5;29.249999999999925;18.41666666666668;31.30833333333335;23.39999999999994!6;12.783333333333347;22.424999999999994;10.725000000000025;56.441666666666734!7;7.799999999999991;7.691666666666664;26.324999999999985;60.55833333333339!8;1.9499999999999953;8.774999999999988;8.774999999999988;82.87499999999994!9;5.849999999999995;8.774999999999988;8.774999999999988;78.97499999999995!10;6.824999999999993;10.725000000000025;18.525000000000006;66.30000000000004!11;10.725000000000025;12.566666666666691;17.549999999999958;61.533333333333424!12;10.23749999999999;9.154166666666665;12.187499999999995;70.79583333333338 | |||
|entrez_gene_id=8880 | |entrez_gene_id=8880 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:FUBP1_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:FUBP1_f1 | ||
|name= | |name=non-redundant134 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=FUBP1_f1 | |representative_motif_id=FUBP1_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant134
- db :HOCOMOCO
- Id :FUBP1_f1
- name :
- score :0.21794049366909068
- External refs:
- Internal refs:
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Sub Motif Members
