FFCP PHASE1:Hg19::chr10:106095687..106095690,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C147|description=CAGE_peak_at_chr10:106095687..106095690,-|id=chr10:106095687..106095690,-|ontology_enrichment_celltype=CL:0000766!2.90e-20!76;CL:0002057!1.54e-19!42;CL:0000738!5.07e-19!140;CL:0000860!1.57e-18!45;CL:0000037!1.31e-15!172;CL:0000566!1.31e-15!172;CL:0000839!2.77e-15!70;CL:0002087!5.88e-15!119;CL:0002032!3.48e-14!165;CL:0000837!3.48e-14!165;CL:0002031!4.92e-14!124;CL:0000557!6.82e-14!71;CL:0000988!9.12e-14!182;CL:0002194!9.35e-14!63;CL:0000576!9.35e-14!63;CL:0000040!9.35e-14!63;CL:0000559!9.35e-14!63;CL:0000763!7.40e-13!112;CL:0000049!7.40e-13!112;CL:0002320!1.04e-12!365;CL:0002009!1.06e-12!65;CL:0000134!2.20e-12!358;CL:0000219!5.50e-11!390;CL:0000048!4.35e-10!430;CL:0000723!2.41e-09!436;CL:0000034!9.47e-09!444;CL:0000094!4.34e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.48e-23;33!CL:0002057;2.48e-23;33!CL:0000094;3.87e-17;8!CL:0000473;5.07e-17;39!CL:0000234;5.07e-17;39!CL:0000576;1.70e-14;48!CL:0000081;3.84e-12;11!CL:0000766;8.29e-12;69!CL:0002087;9.61e-10;104!CL:0000623;2.09e-09;3!CL:0000226;6.79e-09;3!CL:0000842;6.79e-09;3!CL:0000767;2.13e-08;3!CL:0000771;2.09e-07;2!CL:0000763;2.11e-07;100!CL:0000738;3.58e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,3.66e-30,136;CL:0000766,9.50e-27,72;CL:0000860,1.41e-26,42;CL:0002057,1.41e-26,42;CL:0000037,1.76e-23,168;CL:0000473,1.73e-22,48;CL:0000234,1.73e-22,48;CL:0002087,8.35e-22,115;CL:0000988,1.10e-21,177;CL:0002032,9.92e-20,161;CL:0000837,9.92e-20,161;CL:0002031,1.04e-17,120;CL:0000094,4.24e-17,8;CL:0002194,8.62e-17,59;CL:0000576,8.62e-17,59;CL:0000040,8.62e-17,59;CL:0000559,8.62e-17,59;CL:0000763,1.79e-16,108;CL:0000049,1.79e-16,108;CL:0002009,4.65e-16,61;CL:0000839,5.63e-16,66;CL:0000557,1.19e-15,67;CL:0000134,4.44e-14,354;CL:0002320,1.57e-13,361;CL:0000219,5.42e-13,386;CL:0000081,4.09e-12,11;CL:0000623,2.64e-09,3;CL:0000825,2.64e-09,3;CL:0000048,2.87e-09,427;CL:0000226,3.89e-09,3;CL:0000842,3.89e-09,3;CL:0000723,5.99e-09,433;CL:0000034,1.55e-08,441;CL:0000767,2.38e-08,3;CL:0000771,2.11e-07,2|ontology_enrichment_development_v019=CL:0002057;1.21e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.54e-14!102;UBERON:0003061!9.54e-14!102;UBERON:0002193!6.20e-13!112;UBERON:0002384!8.81e-13!375;UBERON:0002371!1.59e-12!80;UBERON:0004765!6.08e-11!101;UBERON:0001434!6.08e-11!101;UBERON:0001474!7.63e-11!86;UBERON:0002405!1.80e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-17,76;UBERON:0002390,3.14e-17,98;UBERON:0003061,3.14e-17,98;UBERON:0001474,1.29e-15,82;UBERON:0002193,6.38e-15,108;UBERON:0002384,3.04e-14,371;UBERON:0004765,1.20e-13,90;UBERON:0002405,5.37e-13,93;UBERON:0001434,8.61e-13,100;UBERON:0003081,1.04e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0.410623275218653,0.376627918784408,0.0764134057479513,0.246301768349837,0,1.96682138424452,1.15148819429164,1.08371286321253,0,0,0.369754010166788,0.309868802321207,0.568676929949686,0,6.09394949385065,5.41470008169383,3.90619567288533,0.223915474239924,0.32389366601898,0,0.290796477559129,0.377875943688809,0,1.16214518452842,0.822335776043652,0.619412741790207,2.01384674625505,1.7931249457037,1.18241114944293,4.48169384957604,5.80936215225443,1.35426486594342,2.63539275359647,1.09162460023138,0.898893937780338,4.59125838556354,0.962787081228281,1.91801137739712,0.659702600373432,0.398927315243264,0.852449501065388,2.90209238628584,0.56738522469114,2.4912889959823,1.25624332628372,4.17186334736161,1.08594422352558,2.42159801053347,0.736555271975129,1.26584954976354,0.211255286311942,0.637812899895131,0.628975936525128,1.01095768031846,0.750884464207532,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,0.954053754535364,2.27685187643779,2.34894875748376,0.382273228125229,0,0.560508562981536,0.263384084775077,0.786839080455332,1.57204305099666,2.2616164889946,0,0.651844533267181,2.36723902867367,0,0.111410456885174,1.17842362989935,0.886135578334485,0.270803863765016,0.25618263945135,0,0.657751618414705,0.276350017785848,0,0.741432815810302,0.535081656179426,5.22677619024884,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,2.41928091869679,2.13952156626806,2.89648807765598,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0.417989933073621,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,6.5890208718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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C147 | |||
|description=CAGE_peak_at_chr10:106095687..106095690,- | |||
|id=chr10:106095687..106095690,- | |||
|ontology_enrichment_celltype=CL:0000766!2.90e-20!76;CL:0002057!1.54e-19!42;CL:0000738!5.07e-19!140;CL:0000860!1.57e-18!45;CL:0000037!1.31e-15!172;CL:0000566!1.31e-15!172;CL:0000839!2.77e-15!70;CL:0002087!5.88e-15!119;CL:0002032!3.48e-14!165;CL:0000837!3.48e-14!165;CL:0002031!4.92e-14!124;CL:0000557!6.82e-14!71;CL:0000988!9.12e-14!182;CL:0002194!9.35e-14!63;CL:0000576!9.35e-14!63;CL:0000040!9.35e-14!63;CL:0000559!9.35e-14!63;CL:0000763!7.40e-13!112;CL:0000049!7.40e-13!112;CL:0002320!1.04e-12!365;CL:0002009!1.06e-12!65;CL:0000134!2.20e-12!358;CL:0000219!5.50e-11!390;CL:0000048!4.35e-10!430;CL:0000723!2.41e-09!436;CL:0000034!9.47e-09!444;CL:0000094!4.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-23;33!CL:0002057;2.48e-23;33!CL:0000094;3.87e-17;8!CL:0000473;5.07e-17;39!CL:0000234;5.07e-17;39!CL:0000576;1.70e-14;48!CL:0000081;3.84e-12;11!CL:0000766;8.29e-12;69!CL:0002087;9.61e-10;104!CL:0000623;2.09e-09;3!CL:0000226;6.79e-09;3!CL:0000842;6.79e-09;3!CL:0000767;2.13e-08;3!CL:0000771;2.09e-07;2!CL:0000763;2.11e-07;100!CL:0000738;3.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.66e-30,136;CL:0000766,9.50e-27,72;CL:0000860,1.41e-26,42;CL:0002057,1.41e-26,42;CL:0000037,1.76e-23,168;CL:0000473,1.73e-22,48;CL:0000234,1.73e-22,48;CL:0002087,8.35e-22,115;CL:0000988,1.10e-21,177;CL:0002032,9.92e-20,161;CL:0000837,9.92e-20,161;CL:0002031,1.04e-17,120;CL:0000094,4.24e-17,8;CL:0002194,8.62e-17,59;CL:0000576,8.62e-17,59;CL:0000040,8.62e-17,59;CL:0000559,8.62e-17,59;CL:0000763,1.79e-16,108;CL:0000049,1.79e-16,108;CL:0002009,4.65e-16,61;CL:0000839,5.63e-16,66;CL:0000557,1.19e-15,67;CL:0000134,4.44e-14,354;CL:0002320,1.57e-13,361;CL:0000219,5.42e-13,386;CL:0000081,4.09e-12,11;CL:0000623,2.64e-09,3;CL:0000825,2.64e-09,3;CL:0000048,2.87e-09,427;CL:0000226,3.89e-09,3;CL:0000842,3.89e-09,3;CL:0000723,5.99e-09,433;CL:0000034,1.55e-08,441;CL:0000767,2.38e-08,3;CL:0000771,2.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.54e-14!102;UBERON:0003061!9.54e-14!102;UBERON:0002193!6.20e-13!112;UBERON:0002384!8.81e-13!375;UBERON:0002371!1.59e-12!80;UBERON:0004765!6.08e-11!101;UBERON:0001434!6.08e-11!101;UBERON:0001474!7.63e-11!86;UBERON:0002405!1.80e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-17,76;UBERON:0002390,3.14e-17,98;UBERON:0003061,3.14e-17,98;UBERON:0001474,1.29e-15,82;UBERON:0002193,6.38e-15,108;UBERON:0002384,3.04e-14,371;UBERON:0004765,1.20e-13,90;UBERON:0002405,5.37e-13,93;UBERON:0001434,8.61e-13,100;UBERON:0003081,1.04e-09,203 | |||
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| |||
|short_description=p@chr10:106095687..106095690,- | |||
}} |
Revision as of 11:36, 10 September 2013
Short description: | p@chr10:106095687..106095690, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:106095687..106095690, - |
Coexpression cluster: | C147_Neutrophils_Eosinophils_CD4_CD14_CD8_Natural_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-17 | 76 |
hematopoietic system | 3.14e-17 | 98 |
blood island | 3.14e-17 | 98 |
bone element | 1.29e-15 | 82 |
hemolymphoid system | 6.38e-15 | 108 |
connective tissue | 3.04e-14 | 371 |
skeletal element | 1.20e-13 | 90 |
immune system | 5.37e-13 | 93 |
skeletal system | 8.61e-13 | 100 |
lateral plate mesoderm | 1.04e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.