FFCP PHASE1:Hg19::chr10:3762780..3762793,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:3762780..3762793,-|id=chr10:3762780..3762793,-|ontology_enrichment_celltype=CL:0002057!5.41e-66!42;CL:0000860!7.07e-61!45;CL:0000766!2.05e-56!76;CL:0000557!3.04e-46!71;CL:0000839!2.21e-44!70;CL:0002009!3.00e-43!65;CL:0002194!3.30e-42!63;CL:0000576!3.30e-42!63;CL:0000040!3.30e-42!63;CL:0000559!3.30e-42!63;CL:0000738!2.00e-40!140;CL:0000763!7.17e-40!112;CL:0000049!7.17e-40!112;CL:0000037!5.88e-33!172;CL:0000566!5.88e-33!172;CL:0002032!1.27e-30!165;CL:0000837!1.27e-30!165;CL:0000988!2.53e-30!182;CL:0002031!2.56e-30!124;CL:0002087!1.48e-28!119;CL:0002393!3.24e-21!9;CL:0002397!3.24e-21!9;CL:0000134!1.90e-13!358;CL:0002320!6.91e-13!365;CL:0000094!5.21e-12!8;CL:0000219!6.37e-11!390;CL:0000048!3.44e-09!430;CL:0000034!5.86e-09!444;CL:0000767!7.30e-09!3;CL:0000723!7.51e-09!436;CL:0000081!1.75e-08!11;CL:0000875!8.72e-08!3;CL:0002396!8.72e-08!3|ontology_enrichment_celltype_v019=CL:0000860;2.70e-26;33!CL:0002057;2.70e-26;33!CL:0000094;2.81e-26;8!CL:0000766;2.27e-21;69!CL:0000576;8.81e-21;48!CL:0000081;4.27e-19;11!CL:0000473;1.15e-18;39!CL:0000234;1.15e-18;39!CL:0000775;1.52e-12;3!CL:0000767;3.77e-12;3!CL:0000763;2.52e-11;100|ontology_enrichment_celltype_v019_2=CL:0000766,1.67e-42,72;CL:0000860,1.77e-36,42;CL:0002057,1.77e-36,42;CL:0000473,1.26e-31,48;CL:0000234,1.26e-31,48;CL:0000763,2.09e-27,108;CL:0000049,2.09e-27,108;CL:0000094,2.97e-26,8;CL:0000839,2.18e-25,66;CL:0000557,5.63e-25,67;CL:0002194,8.00e-25,59;CL:0000576,8.00e-25,59;CL:0000040,8.00e-25,59;CL:0000559,8.00e-25,59;CL:0002009,6.04e-24,61;CL:0000738,3.91e-21,136;CL:0000081,4.44e-19,11;CL:0002032,2.34e-17,161;CL:0000837,2.34e-17,161;CL:0000037,1.69e-16,168;CL:0000988,1.71e-15,177;CL:0002031,6.92e-13,120;CL:0000775,1.62e-12,3;CL:0000767,3.99e-12,3;CL:0002087,1.16e-11,115;CL:0002393,8.08e-09,9;CL:0002397,8.08e-09,9|ontology_enrichment_development_v019=CL:0002057;9.85e-27;42!CL:0000049;8.40e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.79e-51!102;UBERON:0003061!3.79e-51!102;UBERON:0002193!2.38e-45!112;UBERON:0002371!5.24e-42!80;UBERON:0001474!2.79e-38!86;UBERON:0004765!6.65e-31!101;UBERON:0001434!6.65e-31!101;UBERON:0002405!3.47e-27!115;UBERON:0003081!6.84e-21!216;UBERON:0002204!2.59e-15!167;UBERON:0002384!4.00e-12!375;UBERON:0000178!4.33e-12!15;UBERON:0000179!4.33e-12!15;UBERON:0000463!4.33e-12!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.69e-09;15!UBERON:0000179;4.69e-09;15!UBERON:0000463;4.69e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.38e-27,98;UBERON:0003061,4.38e-27,98;UBERON:0002193,2.61e-24,108;UBERON:0002371,9.39e-22,76;UBERON:0001474,5.42e-20,82;UBERON:0004765,5.27e-18,90;UBERON:0002405,2.40e-17,93;UBERON:0001434,5.82e-16,100;UBERON:0003081,1.78e-11,203;UBERON:0000178,6.05e-09,15;UBERON:0000179,6.05e-09,15;UBERON:0000463,6.05e-09,15;UBERON:0002204,1.55e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.15148819429164,0.928896739896456,0,0,0,0,0,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0.436194716338694,0,0,0.464858073811369,0,1.85823822537062,2.3015391385772,0.256160706529101,1.89185783910868,3.10271112662957,1.93645405075148,1.35426486594342,0.941211697713023,0.272906150057846,0.674170453335254,0.918251677112708,3.20929027076094,1.27867425159808,0,0,0.426224750532694,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,6.5156653411535,0,1.84138817993782,0.632924774881769,1.05627643155971,0.850417199860174,2.30624510059213,0.898629049171961,0.450530678524519,0.803627933485401,0.285012743741249,0.19891667719909,1.27864907635244,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,2.24702107184155,0,19.4775291314937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.01489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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:3762780..3762793,- | |||
|id=chr10:3762780..3762793,- | |||
|ontology_enrichment_celltype=CL:0002057!5.41e-66!42;CL:0000860!7.07e-61!45;CL:0000766!2.05e-56!76;CL:0000557!3.04e-46!71;CL:0000839!2.21e-44!70;CL:0002009!3.00e-43!65;CL:0002194!3.30e-42!63;CL:0000576!3.30e-42!63;CL:0000040!3.30e-42!63;CL:0000559!3.30e-42!63;CL:0000738!2.00e-40!140;CL:0000763!7.17e-40!112;CL:0000049!7.17e-40!112;CL:0000037!5.88e-33!172;CL:0000566!5.88e-33!172;CL:0002032!1.27e-30!165;CL:0000837!1.27e-30!165;CL:0000988!2.53e-30!182;CL:0002031!2.56e-30!124;CL:0002087!1.48e-28!119;CL:0002393!3.24e-21!9;CL:0002397!3.24e-21!9;CL:0000134!1.90e-13!358;CL:0002320!6.91e-13!365;CL:0000094!5.21e-12!8;CL:0000219!6.37e-11!390;CL:0000048!3.44e-09!430;CL:0000034!5.86e-09!444;CL:0000767!7.30e-09!3;CL:0000723!7.51e-09!436;CL:0000081!1.75e-08!11;CL:0000875!8.72e-08!3;CL:0002396!8.72e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-26;33!CL:0002057;2.70e-26;33!CL:0000094;2.81e-26;8!CL:0000766;2.27e-21;69!CL:0000576;8.81e-21;48!CL:0000081;4.27e-19;11!CL:0000473;1.15e-18;39!CL:0000234;1.15e-18;39!CL:0000775;1.52e-12;3!CL:0000767;3.77e-12;3!CL:0000763;2.52e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.67e-42,72;CL:0000860,1.77e-36,42;CL:0002057,1.77e-36,42;CL:0000473,1.26e-31,48;CL:0000234,1.26e-31,48;CL:0000763,2.09e-27,108;CL:0000049,2.09e-27,108;CL:0000094,2.97e-26,8;CL:0000839,2.18e-25,66;CL:0000557,5.63e-25,67;CL:0002194,8.00e-25,59;CL:0000576,8.00e-25,59;CL:0000040,8.00e-25,59;CL:0000559,8.00e-25,59;CL:0002009,6.04e-24,61;CL:0000738,3.91e-21,136;CL:0000081,4.44e-19,11;CL:0002032,2.34e-17,161;CL:0000837,2.34e-17,161;CL:0000037,1.69e-16,168;CL:0000988,1.71e-15,177;CL:0002031,6.92e-13,120;CL:0000775,1.62e-12,3;CL:0000767,3.99e-12,3;CL:0002087,1.16e-11,115;CL:0002393,8.08e-09,9;CL:0002397,8.08e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.85e-27;42!CL:0000049;8.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-51!102;UBERON:0003061!3.79e-51!102;UBERON:0002193!2.38e-45!112;UBERON:0002371!5.24e-42!80;UBERON:0001474!2.79e-38!86;UBERON:0004765!6.65e-31!101;UBERON:0001434!6.65e-31!101;UBERON:0002405!3.47e-27!115;UBERON:0003081!6.84e-21!216;UBERON:0002204!2.59e-15!167;UBERON:0002384!4.00e-12!375;UBERON:0000178!4.33e-12!15;UBERON:0000179!4.33e-12!15;UBERON:0000463!4.33e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.69e-09;15!UBERON:0000179;4.69e-09;15!UBERON:0000463;4.69e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.38e-27,98;UBERON:0003061,4.38e-27,98;UBERON:0002193,2.61e-24,108;UBERON:0002371,9.39e-22,76;UBERON:0001474,5.42e-20,82;UBERON:0004765,5.27e-18,90;UBERON:0002405,2.40e-17,93;UBERON:0001434,5.82e-16,100;UBERON:0003081,1.78e-11,203;UBERON:0000178,6.05e-09,15;UBERON:0000179,6.05e-09,15;UBERON:0000463,6.05e-09,15;UBERON:0002204,1.55e-08,167 | |||
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|short_description=p@chr10:3762780..3762793,- | |||
}} |
Revision as of 13:18, 10 September 2013
Short description: | p@chr10:3762780..3762793, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3762780..3762793, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.67e-42 | 72 |
classical monocyte | 1.77e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.77e-36 | 42 |
defensive cell | 1.26e-31 | 48 |
phagocyte | 1.26e-31 | 48 |
myeloid cell | 2.09e-27 | 108 |
common myeloid progenitor | 2.09e-27 | 108 |
granulocyte | 2.97e-26 | 8 |
myeloid lineage restricted progenitor cell | 2.18e-25 | 66 |
granulocyte monocyte progenitor cell | 5.63e-25 | 67 |
monopoietic cell | 8.00e-25 | 59 |
monocyte | 8.00e-25 | 59 |
monoblast | 8.00e-25 | 59 |
promonocyte | 8.00e-25 | 59 |
macrophage dendritic cell progenitor | 6.04e-24 | 61 |
leukocyte | 3.91e-21 | 136 |
blood cell | 4.44e-19 | 11 |
hematopoietic oligopotent progenitor cell | 2.34e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-17 | 161 |
hematopoietic stem cell | 1.69e-16 | 168 |
hematopoietic cell | 1.71e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 6.92e-13 | 120 |
neutrophil | 1.62e-12 | 3 |
basophil | 3.99e-12 | 3 |
nongranular leukocyte | 1.16e-11 | 115 |
intermediate monocyte | 8.08e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.08e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.38e-27 | 98 |
blood island | 4.38e-27 | 98 |
hemolymphoid system | 2.61e-24 | 108 |
bone marrow | 9.39e-22 | 76 |
bone element | 5.42e-20 | 82 |
skeletal element | 5.27e-18 | 90 |
immune system | 2.40e-17 | 93 |
skeletal system | 5.82e-16 | 100 |
lateral plate mesoderm | 1.78e-11 | 203 |
blood | 6.05e-09 | 15 |
haemolymphatic fluid | 6.05e-09 | 15 |
organism substance | 6.05e-09 | 15 |
musculoskeletal system | 1.55e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.