FFCP PHASE1:Hg19::chr11:6411636..6411656,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6609 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11120 | |||
|TSSclassifier=S | |||
|UniProt=G3XAB5,E7EWE2,P17405,Q59EN6,E9PKS3 | |||
|association_with_transcript=0bp_to_ENST00000299397,ENST00000356761,NM_000543,NM_001007593,uc001mcv.1,uc001mcw.2,uc001mcx.2,uc009yew.2,uc009yex.2_5end | |||
|description=CAGE_peak_2_at_SMPD1_5end | |||
|id=chr11:6411636..6411656,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.22e-13!180;CL:0000192!3.78e-10!42;CL:0000514!3.78e-10!42;CL:0000359!2.91e-09!32;CL:0000680!9.48e-08!57;CL:0000056!9.48e-08!57;CL:0000355!9.48e-08!57;CL:0000183!1.45e-07!59;CL:0000057!2.01e-07!75;CL:0000187!6.95e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-09;32!CL:0000192;1.88e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.53e-11,43;CL:0000514,7.53e-11,43;CL:0000359,7.99e-10,32;CL:0000057,8.87e-08,76;CL:0000680,1.06e-07,58;CL:0000056,1.06e-07,58;CL:0000355,1.06e-07,58;CL:0000187,8.39e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;4.67e-08;53!UBERON:0002616;4.67e-08;53!UBERON:0004573;6.37e-08;33!UBERON:0004571;6.37e-08;33!UBERON:0001637;1.20e-07;42!UBERON:0003509;1.20e-07;42!UBERON:0004572;1.20e-07;42!UBERON:0001017;4.48e-07;75!UBERON:0002780;5.63e-07;41!UBERON:0001890;5.63e-07;41!UBERON:0001893;6.16e-07;34 | |||
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| |||
|short_description=p2@SMPD1 | |||
}} |
Revision as of 18:45, 10 September 2013
Short description: | p2@SMPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SMPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299397, ENST00000356761, NM_000543, NM_001007593, uc001mcv.1, uc001mcw.2, uc001mcx.2, uc009yew.2, uc009yex.2_5end |
EntrezGene: | SMPD1 |
HGNC: | 11120 |
UniProt: | G3XAB5E7EWE2P17405Q59EN6E9PKS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.53e-11 | 43 |
smooth muscle myoblast | 7.53e-11 | 43 |
vascular associated smooth muscle cell | 7.99e-10 | 32 |
fibroblast | 8.87e-08 | 76 |
muscle precursor cell | 1.06e-07 | 58 |
myoblast | 1.06e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-07 | 58 |
muscle cell | 8.39e-07 | 55 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.