FFCP PHASE1:Hg19::chr12:10339063..10339092,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=120939|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26438|TSSclassifier=S|UniProt=|association_with_transcript=67bp_to_ENST00000546153_5end|description=CAGE_peak_4_at_C12orf59_5end|id=chr12:10339063..10339092,+|ontology_enrichment_celltype=CL:0002194!7.05e-38!63;CL:0000576!7.05e-38!63;CL:0000040!7.05e-38!63;CL:0000559!7.05e-38!63;CL:0002009!2.72e-36!65;CL:0002057!1.61e-33!42;CL:0000839!1.00e-32!70;CL:0000766!2.65e-32!76;CL:0000557!4.51e-32!71;CL:0000860!1.47e-30!45;CL:0000763!5.67e-30!112;CL:0000049!5.67e-30!112;CL:0000037!1.30e-18!172;CL:0000566!1.30e-18!172;CL:0002087!2.03e-18!119;CL:0002032!1.36e-17!165;CL:0000837!1.36e-17!165;CL:0000988!1.20e-16!182;CL:0002031!2.13e-15!124;CL:0000738!2.82e-15!140|ontology_enrichment_celltype_v019=CL:0000860;3.42e-82;33!CL:0002057;3.42e-82;33!CL:0000473;5.74e-79;39!CL:0000234;5.74e-79;39!CL:0000576;3.85e-36;48!CL:0000766;5.69e-28;69!CL:0000763;3.27e-15;100!CL:0000235;6.46e-15;6!CL:0002087;1.01e-09;104!CL:0000738;2.65e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,2.54e-81,48;CL:0000234,2.54e-81,48;CL:0000860,1.63e-67,42;CL:0002057,1.63e-67,42;CL:0002194,6.75e-64,59;CL:0000576,6.75e-64,59;CL:0000040,6.75e-64,59;CL:0000559,6.75e-64,59;CL:0002009,1.20e-61,61;CL:0000839,1.30e-56,66;CL:0000557,1.08e-55,67;CL:0000766,1.77e-51,72;CL:0000763,3.57e-44,108;CL:0000049,3.57e-44,108;CL:0002087,3.26e-30,115;CL:0002031,1.01e-28,120;CL:0002032,1.23e-27,161;CL:0000837,1.23e-27,161;CL:0000037,3.17e-26,168;CL:0000738,1.13e-24,136;CL:0000988,1.42e-24,177;CL:0000235,5.14e-15,6;CL:0000134,6.32e-10,354;CL:0002320,1.32e-09,361;CL:0000219,1.80e-08,386;CL:0000048,4.39e-07,427;CL:0000723,6.82e-07,433|ontology_enrichment_development_v019=CL:0002057;8.06e-51;42!CL:0000049;4.06e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.05e-28!80;UBERON:0001474!1.77e-25!86;UBERON:0002390!5.37e-25!102;UBERON:0003061!5.37e-25!102;UBERON:0002193!1.78e-22!112;UBERON:0007023!1.80e-22!115;UBERON:0004765!7.48e-21!101;UBERON:0001434!7.48e-21!101;UBERON:0002405!2.18e-18!115;UBERON:0001893!5.08e-17!34;UBERON:0001049!1.52e-16!57;UBERON:0005068!1.52e-16!57;UBERON:0006241!1.52e-16!57;UBERON:0007135!1.52e-16!57;UBERON:0002020!1.68e-16!34;UBERON:0003528!1.68e-16!34;UBERON:0002780!6.53e-16!41;UBERON:0001890!6.53e-16!41;UBERON:0006240!6.53e-16!41;UBERON:0002791!7.25e-16!33;UBERON:0003080!2.25e-15!42;UBERON:0001869!7.37e-15!32;UBERON:0002619!8.74e-15!22;UBERON:0002616!2.37e-14!59;UBERON:0001017!3.02e-13!82;UBERON:0000955!5.26e-13!69;UBERON:0006238!5.26e-13!69;UBERON:0000956!1.52e-12!25;UBERON:0000203!1.52e-12!25;UBERON:0001950!3.09e-12!20;UBERON:0005743!3.33e-12!86;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0002346!1.69e-10!90;UBERON:0000073!3.34e-10!94;UBERON:0001016!3.34e-10!94;UBERON:0000062!1.39e-09!511;UBERON:0003056!1.89e-09!61;UBERON:0002204!8.54e-09!167;UBERON:0003081!3.03e-07!216;UBERON:0000033!4.55e-07!123;UBERON:0000153!7.67e-07!129;UBERON:0007811!7.67e-07!129;UBERON:0000200!9.20e-07!6|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.68e-48,76;UBERON:0001474,1.43e-44,82;UBERON:0004765,3.90e-40,90;UBERON:0002405,1.15e-38,93;UBERON:0002390,2.04e-36,98;UBERON:0003061,2.04e-36,98;UBERON:0001434,1.41e-35,100;UBERON:0002193,1.56e-32,108;UBERON:0002204,5.02e-19,167;UBERON:0003081,1.28e-14,203;UBERON:0002384,3.64e-09,371;UBERON:0000926,2.37e-07,315;UBERON:0004120,2.37e-07,315;UBERON:0006603,2.37e-07,315|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.802177789880567,0,0.671746422719773,0.971680998056939,0.77272670290256,3.19876125315042,4.91238726795452,2.91100873425379,1.39457422143411,2.05583944010913,1.85823822537062,1.1507695692886,1.5369642391746,1.89185783910868,1.03423704220986,1.29096936716765,0,3.01187743268168,1.91034305040492,3.37085226667627,2.14258724659632,1.60464513538047,4.47535988059329,0.329851300186716,1.39624560335142,3.83602275479425,2.03146467040009,0.56738522469114,1.24564449799115,0.75374599577023,0.521482918420201,1.52032191293582,0,1.84138817993782,1.26584954976354,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63802985597466,3.56714789492948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.01805673145701,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=120939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26438 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000546153_5end | |||
|description=CAGE_peak_4_at_C12orf59_5end | |||
|id=chr12:10339063..10339092,+ | |||
|ontology_enrichment_celltype=CL:0002194!7.05e-38!63;CL:0000576!7.05e-38!63;CL:0000040!7.05e-38!63;CL:0000559!7.05e-38!63;CL:0002009!2.72e-36!65;CL:0002057!1.61e-33!42;CL:0000839!1.00e-32!70;CL:0000766!2.65e-32!76;CL:0000557!4.51e-32!71;CL:0000860!1.47e-30!45;CL:0000763!5.67e-30!112;CL:0000049!5.67e-30!112;CL:0000037!1.30e-18!172;CL:0000566!1.30e-18!172;CL:0002087!2.03e-18!119;CL:0002032!1.36e-17!165;CL:0000837!1.36e-17!165;CL:0000988!1.20e-16!182;CL:0002031!2.13e-15!124;CL:0000738!2.82e-15!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-82;33!CL:0002057;3.42e-82;33!CL:0000473;5.74e-79;39!CL:0000234;5.74e-79;39!CL:0000576;3.85e-36;48!CL:0000766;5.69e-28;69!CL:0000763;3.27e-15;100!CL:0000235;6.46e-15;6!CL:0002087;1.01e-09;104!CL:0000738;2.65e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.54e-81,48;CL:0000234,2.54e-81,48;CL:0000860,1.63e-67,42;CL:0002057,1.63e-67,42;CL:0002194,6.75e-64,59;CL:0000576,6.75e-64,59;CL:0000040,6.75e-64,59;CL:0000559,6.75e-64,59;CL:0002009,1.20e-61,61;CL:0000839,1.30e-56,66;CL:0000557,1.08e-55,67;CL:0000766,1.77e-51,72;CL:0000763,3.57e-44,108;CL:0000049,3.57e-44,108;CL:0002087,3.26e-30,115;CL:0002031,1.01e-28,120;CL:0002032,1.23e-27,161;CL:0000837,1.23e-27,161;CL:0000037,3.17e-26,168;CL:0000738,1.13e-24,136;CL:0000988,1.42e-24,177;CL:0000235,5.14e-15,6;CL:0000134,6.32e-10,354;CL:0002320,1.32e-09,361;CL:0000219,1.80e-08,386;CL:0000048,4.39e-07,427;CL:0000723,6.82e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.06e-51;42!CL:0000049;4.06e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.05e-28!80;UBERON:0001474!1.77e-25!86;UBERON:0002390!5.37e-25!102;UBERON:0003061!5.37e-25!102;UBERON:0002193!1.78e-22!112;UBERON:0007023!1.80e-22!115;UBERON:0004765!7.48e-21!101;UBERON:0001434!7.48e-21!101;UBERON:0002405!2.18e-18!115;UBERON:0001893!5.08e-17!34;UBERON:0001049!1.52e-16!57;UBERON:0005068!1.52e-16!57;UBERON:0006241!1.52e-16!57;UBERON:0007135!1.52e-16!57;UBERON:0002020!1.68e-16!34;UBERON:0003528!1.68e-16!34;UBERON:0002780!6.53e-16!41;UBERON:0001890!6.53e-16!41;UBERON:0006240!6.53e-16!41;UBERON:0002791!7.25e-16!33;UBERON:0003080!2.25e-15!42;UBERON:0001869!7.37e-15!32;UBERON:0002619!8.74e-15!22;UBERON:0002616!2.37e-14!59;UBERON:0001017!3.02e-13!82;UBERON:0000955!5.26e-13!69;UBERON:0006238!5.26e-13!69;UBERON:0000956!1.52e-12!25;UBERON:0000203!1.52e-12!25;UBERON:0001950!3.09e-12!20;UBERON:0005743!3.33e-12!86;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0002346!1.69e-10!90;UBERON:0000073!3.34e-10!94;UBERON:0001016!3.34e-10!94;UBERON:0000062!1.39e-09!511;UBERON:0003056!1.89e-09!61;UBERON:0002204!8.54e-09!167;UBERON:0003081!3.03e-07!216;UBERON:0000033!4.55e-07!123;UBERON:0000153!7.67e-07!129;UBERON:0007811!7.67e-07!129;UBERON:0000200!9.20e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.68e-48,76;UBERON:0001474,1.43e-44,82;UBERON:0004765,3.90e-40,90;UBERON:0002405,1.15e-38,93;UBERON:0002390,2.04e-36,98;UBERON:0003061,2.04e-36,98;UBERON:0001434,1.41e-35,100;UBERON:0002193,1.56e-32,108;UBERON:0002204,5.02e-19,167;UBERON:0003081,1.28e-14,203;UBERON:0002384,3.64e-09,371;UBERON:0000926,2.37e-07,315;UBERON:0004120,2.37e-07,315;UBERON:0006603,2.37e-07,315 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.802177789880567,0,0.671746422719773,0.971680998056939,0.77272670290256,3.19876125315042,4.91238726795452,2.91100873425379,1.39457422143411,2.05583944010913,1.85823822537062,1.1507695692886,1.5369642391746,1.89185783910868,1.03423704220986,1.29096936716765,0,3.01187743268168,1.91034305040492,3.37085226667627,2.14258724659632,1.60464513538047,4.47535988059329,0.329851300186716,1.39624560335142,3.83602275479425,2.03146467040009,0.56738522469114,1.24564449799115,0.75374599577023,0.521482918420201,1.52032191293582,0,1.84138817993782,1.26584954976354,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63802985597466,3.56714789492948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,4.01805673145701,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.199579371432817,0.5745161103971,0,0,0.280797178113459,0,8.61739426751628,2.50634477090067,0,0,0.403599414382095,2.12923118845163,0,0.307240764308458,0.223676107892416,0.333698283423817,4.49392619424693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01101699471016,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,1.57948847310864,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0.554645257684261,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.319267718114302,0.41023272848151,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.810451015420736,0.781078098613847,0.206686796501184,0.634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0.460935950223117,0,0.203909198930495,0.986591603442736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0.891139200981258,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.286679166302903,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p4@C12orf59 | |||
}} |
Revision as of 20:30, 10 September 2013
Short description: | p4@C12orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C12orf59_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENST00000546153_5end |
EntrezGene: | C12orf59 |
HGNC: | 26438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.54e-81 | 48 |
phagocyte | 2.54e-81 | 48 |
classical monocyte | 1.63e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-67 | 42 |
monopoietic cell | 6.75e-64 | 59 |
monocyte | 6.75e-64 | 59 |
monoblast | 6.75e-64 | 59 |
promonocyte | 6.75e-64 | 59 |
macrophage dendritic cell progenitor | 1.20e-61 | 61 |
myeloid lineage restricted progenitor cell | 1.30e-56 | 66 |
granulocyte monocyte progenitor cell | 1.08e-55 | 67 |
myeloid leukocyte | 1.77e-51 | 72 |
myeloid cell | 3.57e-44 | 108 |
common myeloid progenitor | 3.57e-44 | 108 |
nongranular leukocyte | 3.26e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-28 | 120 |
hematopoietic oligopotent progenitor cell | 1.23e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-27 | 161 |
hematopoietic stem cell | 3.17e-26 | 168 |
leukocyte | 1.13e-24 | 136 |
hematopoietic cell | 1.42e-24 | 177 |
macrophage | 5.14e-15 | 6 |
mesenchymal cell | 6.32e-10 | 354 |
connective tissue cell | 1.32e-09 | 361 |
motile cell | 1.80e-08 | 386 |
multi fate stem cell | 4.39e-07 | 427 |
somatic stem cell | 6.82e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.68e-48 | 76 |
bone element | 1.43e-44 | 82 |
skeletal element | 3.90e-40 | 90 |
immune system | 1.15e-38 | 93 |
hematopoietic system | 2.04e-36 | 98 |
blood island | 2.04e-36 | 98 |
skeletal system | 1.41e-35 | 100 |
hemolymphoid system | 1.56e-32 | 108 |
musculoskeletal system | 5.02e-19 | 167 |
lateral plate mesoderm | 1.28e-14 | 203 |
connective tissue | 3.64e-09 | 371 |
mesoderm | 2.37e-07 | 315 |
mesoderm-derived structure | 2.37e-07 | 315 |
presumptive mesoderm | 2.37e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.