FFCP PHASE1:Hg19::chr13:98795339..98795360,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |||
|TSSclassifier=S | |||
|UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | |||
|association_with_transcript=-73bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | |||
|description=CAGE_peak_1_at_FARP1_5end | |||
|id=chr13:98795339..98795360,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.63e-18!180;CL:0002321!5.37e-13!248;CL:0000220!1.12e-12!246;CL:1000449!3.72e-10!16;CL:1000497!8.23e-10!18;CL:0002518!8.23e-10!18;CL:1000507!3.00e-08!12;CL:1000494!3.00e-08!12;CL:0002681!3.23e-08!13;CL:0002584!3.23e-08!13;CL:0000133!3.26e-08!59;CL:0000057!4.78e-08!75;CL:0000222!8.45e-07!119;CL:0000333!9.84e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.95e-10;15!CL:1000497;9.64e-10;17!CL:0002518;9.64e-10;17!CL:0002681;3.57e-08;12!CL:0002584;3.57e-08;12!CL:1000507;6.88e-08;10!CL:1000494;6.88e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.02e-13,250;CL:1000449,3.99e-10,15;CL:1000497,9.62e-10,17;CL:0002518,9.62e-10,17;CL:0000057,1.70e-08,76;CL:0000133,3.07e-08,59;CL:0002681,3.60e-08,12;CL:0002584,3.60e-08,12;CL:1000507,6.88e-08,10;CL:1000494,6.88e-08,10;CL:0000222,4.39e-07,121;CL:0000333,9.40e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@FARP1 | |||
}} |
Revision as of 03:03, 11 September 2013
Short description: | p1@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000376581, ENST00000376584, ENST00000376586, NM_001001715, NM_005766, uc001vni.2, uc001vnj.2_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | E9PCB0C9JME2Q5JVI9Q9Y4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.02e-13 | 250 |
epithelial cell of nephron | 3.99e-10 | 15 |
kidney cell | 9.62e-10 | 17 |
kidney epithelial cell | 9.62e-10 | 17 |
fibroblast | 1.70e-08 | 76 |
neurectodermal cell | 3.07e-08 | 59 |
kidney cortical cell | 3.60e-08 | 12 |
renal cortical epithelial cell | 3.60e-08 | 12 |
kidney tubule cell | 6.88e-08 | 10 |
nephron tubule epithelial cell | 6.88e-08 | 10 |
mesodermal cell | 4.39e-07 | 121 |
migratory neural crest cell | 9.40e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.