FFCP PHASE1:Hg19::chr15:100106155..100106243,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6993 | |||
|TSSclassifier=S | |||
|UniProt=B4DFQ7 | |||
|association_with_transcript=0bp_to_ENST00000449277,ENST00000557785,ENST00000558049,ENST00000558983,ENST00000559036_5end | |||
|description=CAGE_peak_1_at_MEF2A_5end | |||
|id=chr15:100106155..100106243,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-21!42;CL:0000766!1.51e-21!76;CL:0000738!1.39e-20!140;CL:0002009!3.30e-20!65;CL:0000557!1.30e-19!71;CL:0002194!4.19e-19!63;CL:0000576!4.19e-19!63;CL:0000040!4.19e-19!63;CL:0000559!4.19e-19!63;CL:0000860!9.65e-19!45;CL:0000839!8.90e-18!70;CL:0002087!7.91e-16!119;CL:0002031!2.15e-15!124;CL:0000037!1.34e-14!172;CL:0000566!1.34e-14!172;CL:0000763!4.58e-14!112;CL:0000049!4.58e-14!112;CL:0002032!2.52e-13!165;CL:0000837!2.52e-13!165;CL:0000988!2.34e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-17;33!CL:0002057;2.14e-17;33!CL:0000473;3.46e-15;39!CL:0000234;3.46e-15;39!CL:0000576;3.07e-13;48!CL:0000766;1.46e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.67e-23,72;CL:0002009,2.52e-22,61;CL:0000473,2.81e-22,48;CL:0000234,2.81e-22,48;CL:0000738,9.54e-22,136;CL:0000860,1.33e-21,42;CL:0002057,1.33e-21,42;CL:0000557,1.57e-21,67;CL:0002194,3.53e-21,59;CL:0000576,3.53e-21,59;CL:0000040,3.53e-21,59;CL:0000559,3.53e-21,59;CL:0000839,1.43e-19,66;CL:0002087,6.60e-17,115;CL:0002031,2.03e-16,120;CL:0000037,2.24e-15,168;CL:0000763,4.26e-15,108;CL:0000049,4.26e-15,108;CL:0002032,4.49e-14,161;CL:0000837,4.49e-14,161;CL:0000988,2.12e-13,177 | |||
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| |||
|short_description=p1@MEF2A | |||
}} |
Revision as of 06:17, 11 September 2013
Short description: | p1@MEF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MEF2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449277, ENST00000557785, ENST00000558049, ENST00000558983, ENST00000559036_5end |
EntrezGene: | MEF2A |
HGNC: | 6993 |
UniProt: | B4DFQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.67e-23 | 72 |
macrophage dendritic cell progenitor | 2.52e-22 | 61 |
defensive cell | 2.81e-22 | 48 |
phagocyte | 2.81e-22 | 48 |
leukocyte | 9.54e-22 | 136 |
classical monocyte | 1.33e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-21 | 42 |
granulocyte monocyte progenitor cell | 1.57e-21 | 67 |
monopoietic cell | 3.53e-21 | 59 |
monocyte | 3.53e-21 | 59 |
monoblast | 3.53e-21 | 59 |
promonocyte | 3.53e-21 | 59 |
myeloid lineage restricted progenitor cell | 1.43e-19 | 66 |
nongranular leukocyte | 6.60e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.03e-16 | 120 |
hematopoietic stem cell | 2.24e-15 | 168 |
myeloid cell | 4.26e-15 | 108 |
common myeloid progenitor | 4.26e-15 | 108 |
hematopoietic oligopotent progenitor cell | 4.49e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-14 | 161 |
hematopoietic cell | 2.12e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.59e-35 | 114 |
hematopoietic system | 1.10e-18 | 98 |
blood island | 1.10e-18 | 98 |
bone element | 5.03e-18 | 82 |
hemolymphoid system | 2.94e-17 | 108 |
bone marrow | 3.38e-17 | 76 |
immune system | 2.94e-16 | 93 |
neural tube | 8.97e-15 | 56 |
neural rod | 8.97e-15 | 56 |
future spinal cord | 8.97e-15 | 56 |
neural keel | 8.97e-15 | 56 |
skeletal element | 2.11e-14 | 90 |
regional part of forebrain | 4.73e-14 | 41 |
forebrain | 4.73e-14 | 41 |
anterior neural tube | 4.73e-14 | 41 |
future forebrain | 4.73e-14 | 41 |
regional part of nervous system | 9.15e-14 | 53 |
regional part of brain | 9.15e-14 | 53 |
skeletal system | 5.07e-13 | 100 |
telencephalon | 2.26e-12 | 34 |
brain grey matter | 5.61e-12 | 34 |
gray matter | 5.61e-12 | 34 |
cerebral hemisphere | 7.67e-12 | 32 |
regional part of telencephalon | 1.75e-11 | 32 |
brain | 1.88e-11 | 68 |
future brain | 1.88e-11 | 68 |
regional part of cerebral cortex | 1.99e-11 | 22 |
neocortex | 7.38e-11 | 20 |
nervous system | 1.40e-10 | 89 |
central nervous system | 2.19e-10 | 81 |
neurectoderm | 2.05e-09 | 86 |
cerebral cortex | 2.88e-09 | 25 |
pallium | 2.88e-09 | 25 |
neural plate | 8.42e-09 | 82 |
presumptive neural plate | 8.42e-09 | 82 |
pre-chordal neural plate | 8.35e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.