FFCP PHASE1:Hg19::chr16:15737233..15737254,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54820|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17619|TSSclassifier=S|UniProt=Q9NXR1|association_with_transcript=109bp_to_ENST00000396353,ENST00000396355,NM_001143979,uc010uzy.1_5end|coexpression_cluster_id=C75|description=CAGE_peak_3_at_NDE1_5end|id=chr16:15737233..15737254,+|ontology_enrichment_celltype=CL:0000738!3.80e-46!140;CL:0000037!6.51e-35!172;CL:0000566!6.51e-35!172;CL:0000988!1.46e-33!182;CL:0002031!4.88e-30!124;CL:0002087!1.62e-29!119;CL:0002032!1.10e-28!165;CL:0000837!1.10e-28!165;CL:0002057!2.67e-25!42;CL:0000766!5.86e-25!76;CL:0000860!2.54e-24!45;CL:0000557!3.00e-18!71;CL:0002009!8.27e-17!65;CL:0000763!1.44e-16!112;CL:0000049!1.44e-16!112;CL:0000839!3.08e-16!70;CL:0002194!3.28e-15!63;CL:0000576!3.28e-15!63;CL:0000040!3.28e-15!63;CL:0000559!3.28e-15!63;CL:0002393!2.55e-13!9;CL:0002397!2.55e-13!9;CL:0000134!8.18e-13!358;CL:0000094!1.43e-12!8;CL:0002320!4.65e-12!365;CL:0000838!4.95e-12!52;CL:0000542!1.19e-11!53;CL:0000051!1.19e-11!53;CL:0000081!1.45e-10!11;CL:0000219!6.81e-10!390;CL:0000034!1.87e-09!444;CL:0000723!3.94e-09!436;CL:0000048!2.08e-08!430;CL:0000624!2.32e-08!6;CL:0000791!2.42e-07!18;CL:0000789!2.42e-07!18;CL:0002420!2.42e-07!18;CL:0002419!2.42e-07!18;CL:0000790!2.42e-07!18|ontology_enrichment_celltype_v019=CL:0000094;3.71e-30;8!CL:0002393;1.96e-23;6!CL:0002397;1.96e-23;6!CL:0000081;1.47e-21;11!CL:0000766;4.95e-17;69!CL:0000623;5.65e-13;3!CL:0000767;6.88e-13;3!CL:0000576;1.53e-12;48!CL:0002087;2.61e-12;104!CL:0000784;4.56e-12;3!CL:0000775;1.19e-11;3!CL:0000226;1.48e-11;3!CL:0000842;1.48e-11;3!CL:0000860;1.46e-10;33!CL:0002057;1.46e-10;33!CL:0000738;1.79e-09;136!CL:0000771;4.11e-09;2!CL:0000763;1.01e-08;100!CL:0000473;1.82e-07;39!CL:0000234;1.82e-07;39!CL:0000097;2.21e-07;5!CL:0000988;5.10e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,2.27e-54,136;CL:0000037,2.51e-44,168;CL:0000988,1.45e-41,177;CL:0000766,1.82e-39,72;CL:0002032,3.28e-34,161;CL:0000837,3.28e-34,161;CL:0000094,2.50e-30,8;CL:0002031,3.71e-30,120;CL:0002087,1.22e-29,115;CL:0000763,6.88e-26,108;CL:0000049,6.88e-26,108;CL:0000860,1.60e-24,42;CL:0002057,1.60e-24,42;CL:0000557,1.79e-23,67;CL:0000081,1.11e-21,11;CL:0000839,1.29e-21,66;CL:0000473,6.69e-21,48;CL:0000234,6.69e-21,48;CL:0002393,1.28e-20,9;CL:0002397,1.28e-20,9;CL:0002009,2.69e-19,61;CL:0002194,6.49e-18,59;CL:0000576,6.49e-18,59;CL:0000040,6.49e-18,59;CL:0000559,6.49e-18,59;CL:0000134,1.24e-15,354;CL:0002320,3.98e-15,361;CL:0000219,2.42e-13,386;CL:0000623,5.23e-13,3;CL:0000825,5.23e-13,3;CL:0000767,6.37e-13,3;CL:0000034,7.06e-13,441;CL:0000784,5.11e-12,3;CL:0000775,9.68e-12,3;CL:0000226,1.17e-11,3;CL:0000842,1.17e-11,3;CL:0000723,1.23e-11,433;CL:0000048,3.68e-11,427;CL:0000771,3.65e-09,2;CL:0000838,3.51e-08,52;CL:0000542,5.58e-08,53;CL:0000051,5.58e-08,53;CL:0000097,2.55e-07,5;CL:0002028,2.55e-07,5|ontology_enrichment_development_v019=CL:0002057;1.82e-16;42!CL:0000049;8.72e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.10e-18!102;UBERON:0003061!1.10e-18!102;UBERON:0002371!4.57e-18!80;UBERON:0002193!2.30e-17!112;UBERON:0001474!6.46e-16!86;UBERON:0002405!7.05e-16!115;UBERON:0004765!1.73e-12!101;UBERON:0001434!1.73e-12!101;UBERON:0002384!1.77e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.77e-22,76;UBERON:0002390,6.58e-21,98;UBERON:0003061,6.58e-21,98;UBERON:0001474,4.08e-20,82;UBERON:0002193,2.22e-18,108;UBERON:0004765,7.98e-18,90;UBERON:0002405,4.57e-17,93;UBERON:0001434,1.78e-15,100;UBERON:0002384,1.95e-14,371;UBERON:0002204,4.30e-07,167;UBERON:0003081,6.64e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.328402357799783,0.550975469195755,4.72037132218685,4.22212337906934,8.20525453575203,0,0,0.739508020333575,0,0.284338464974843,4.11040615068786,14.4038806218288,7.82123345133553,11.0675544065084,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,1.41889337933151,1.37898272294647,1.29096936716765,5.41705946377367,0,0,0.674170453335254,1.22433556948361,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0.870627715885752,0,2.4912889959823,0,0,0,2.42159801053347,2.20966581592539,3.16462387440884,1.47878700418359,4.889898899196,2.51590374610051,1.12328631146495,0.450530678524519,1.44653028027372,0.855038231223746,1.59133341759272,0.365328307529268,1.75996244461323,0,0,2.98711155796555,0,0.574752439954483,0,0,3.41527781465669,0,2.29363936875137,2.64342657158052,1.12101712596307,0,4.13090517239049,0.786021525498329,2.87842098599313,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0,0.552700035571697,0,0,0,0,0.113309342697566,0.383220493601921,1.03088233644789,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,4.43534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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17619 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXR1 | |||
|association_with_transcript=109bp_to_ENST00000396353,ENST00000396355,NM_001143979,uc010uzy.1_5end | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_3_at_NDE1_5end | |||
|id=chr16:15737233..15737254,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.80e-46!140;CL:0000037!6.51e-35!172;CL:0000566!6.51e-35!172;CL:0000988!1.46e-33!182;CL:0002031!4.88e-30!124;CL:0002087!1.62e-29!119;CL:0002032!1.10e-28!165;CL:0000837!1.10e-28!165;CL:0002057!2.67e-25!42;CL:0000766!5.86e-25!76;CL:0000860!2.54e-24!45;CL:0000557!3.00e-18!71;CL:0002009!8.27e-17!65;CL:0000763!1.44e-16!112;CL:0000049!1.44e-16!112;CL:0000839!3.08e-16!70;CL:0002194!3.28e-15!63;CL:0000576!3.28e-15!63;CL:0000040!3.28e-15!63;CL:0000559!3.28e-15!63;CL:0002393!2.55e-13!9;CL:0002397!2.55e-13!9;CL:0000134!8.18e-13!358;CL:0000094!1.43e-12!8;CL:0002320!4.65e-12!365;CL:0000838!4.95e-12!52;CL:0000542!1.19e-11!53;CL:0000051!1.19e-11!53;CL:0000081!1.45e-10!11;CL:0000219!6.81e-10!390;CL:0000034!1.87e-09!444;CL:0000723!3.94e-09!436;CL:0000048!2.08e-08!430;CL:0000624!2.32e-08!6;CL:0000791!2.42e-07!18;CL:0000789!2.42e-07!18;CL:0002420!2.42e-07!18;CL:0002419!2.42e-07!18;CL:0000790!2.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.71e-30;8!CL:0002393;1.96e-23;6!CL:0002397;1.96e-23;6!CL:0000081;1.47e-21;11!CL:0000766;4.95e-17;69!CL:0000623;5.65e-13;3!CL:0000767;6.88e-13;3!CL:0000576;1.53e-12;48!CL:0002087;2.61e-12;104!CL:0000784;4.56e-12;3!CL:0000775;1.19e-11;3!CL:0000226;1.48e-11;3!CL:0000842;1.48e-11;3!CL:0000860;1.46e-10;33!CL:0002057;1.46e-10;33!CL:0000738;1.79e-09;136!CL:0000771;4.11e-09;2!CL:0000763;1.01e-08;100!CL:0000473;1.82e-07;39!CL:0000234;1.82e-07;39!CL:0000097;2.21e-07;5!CL:0000988;5.10e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.27e-54,136;CL:0000037,2.51e-44,168;CL:0000988,1.45e-41,177;CL:0000766,1.82e-39,72;CL:0002032,3.28e-34,161;CL:0000837,3.28e-34,161;CL:0000094,2.50e-30,8;CL:0002031,3.71e-30,120;CL:0002087,1.22e-29,115;CL:0000763,6.88e-26,108;CL:0000049,6.88e-26,108;CL:0000860,1.60e-24,42;CL:0002057,1.60e-24,42;CL:0000557,1.79e-23,67;CL:0000081,1.11e-21,11;CL:0000839,1.29e-21,66;CL:0000473,6.69e-21,48;CL:0000234,6.69e-21,48;CL:0002393,1.28e-20,9;CL:0002397,1.28e-20,9;CL:0002009,2.69e-19,61;CL:0002194,6.49e-18,59;CL:0000576,6.49e-18,59;CL:0000040,6.49e-18,59;CL:0000559,6.49e-18,59;CL:0000134,1.24e-15,354;CL:0002320,3.98e-15,361;CL:0000219,2.42e-13,386;CL:0000623,5.23e-13,3;CL:0000825,5.23e-13,3;CL:0000767,6.37e-13,3;CL:0000034,7.06e-13,441;CL:0000784,5.11e-12,3;CL:0000775,9.68e-12,3;CL:0000226,1.17e-11,3;CL:0000842,1.17e-11,3;CL:0000723,1.23e-11,433;CL:0000048,3.68e-11,427;CL:0000771,3.65e-09,2;CL:0000838,3.51e-08,52;CL:0000542,5.58e-08,53;CL:0000051,5.58e-08,53;CL:0000097,2.55e-07,5;CL:0002028,2.55e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-16;42!CL:0000049;8.72e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-18!102;UBERON:0003061!1.10e-18!102;UBERON:0002371!4.57e-18!80;UBERON:0002193!2.30e-17!112;UBERON:0001474!6.46e-16!86;UBERON:0002405!7.05e-16!115;UBERON:0004765!1.73e-12!101;UBERON:0001434!1.73e-12!101;UBERON:0002384!1.77e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.77e-22,76;UBERON:0002390,6.58e-21,98;UBERON:0003061,6.58e-21,98;UBERON:0001474,4.08e-20,82;UBERON:0002193,2.22e-18,108;UBERON:0004765,7.98e-18,90;UBERON:0002405,4.57e-17,93;UBERON:0001434,1.78e-15,100;UBERON:0002384,1.95e-14,371;UBERON:0002204,4.30e-07,167;UBERON:0003081,6.64e-07,203 | |||
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|short_description=p3@NDE1 | |||
}} |
Revision as of 09:22, 11 September 2013
Short description: | p3@NDE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NDE1_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | 109bp_to_ENST00000396353, ENST00000396355, NM_001143979, uc010uzy.1_5end |
EntrezGene: | NDE1 |
HGNC: | 17619 |
UniProt: | Q9NXR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.77e-22 | 76 |
hematopoietic system | 6.58e-21 | 98 |
blood island | 6.58e-21 | 98 |
bone element | 4.08e-20 | 82 |
hemolymphoid system | 2.22e-18 | 108 |
skeletal element | 7.98e-18 | 90 |
immune system | 4.57e-17 | 93 |
skeletal system | 1.78e-15 | 100 |
connective tissue | 1.95e-14 | 371 |
musculoskeletal system | 4.30e-07 | 167 |
lateral plate mesoderm | 6.64e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.