FFCP PHASE1:Hg19::chr16:84884236..84884247,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:84884236..84884247,+|id=chr16:84884236..84884247,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.07e-11;19!CL:0002195;2.51e-10;2!CL:0002571;2.51e-10;2!CL:0000136;5.92e-09;13!CL:0000197;4.74e-08;6!CL:0000098;4.74e-08;6!CL:0002167;4.74e-08;6!CL:0000775;2.32e-07;3!CL:0000346;2.43e-07;3!CL:1000428;2.43e-07;3!CL:0002541;2.76e-07;3!CL:0002615;3.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,8.88e-12,19;CL:0002195,2.18e-10,2;CL:0002571,2.18e-10,2;CL:0000197,4.69e-08,6;CL:0000098,4.69e-08,6;CL:0002167,4.69e-08,6;CL:0000136,9.77e-08,15;CL:0002541,2.04e-07,3;CL:0000775,2.18e-07,3;CL:0000346,2.80e-07,3;CL:1000428,2.80e-07,3;CL:0002615,4.48e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.06e-08!115;UBERON:0000478!6.75e-07!24|ontology_enrichment_uberon_v019=UBERON:0000478;9.39e-12;24!UBERON:0005631;6.61e-08;10!UBERON:0000158;6.61e-08;10!UBERON:0000412;2.43e-07;3!UBERON:0001992;2.43e-07;3!UBERON:0003124;2.76e-07;3!UBERON:0000920;2.76e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000478,7.87e-12,24;UBERON:0005631,1.62e-08,14;UBERON:0000158,1.62e-08,14;UBERON:0000920,2.04e-07,3;UBERON:0000412,2.80e-07,3;UBERON:0001992,2.80e-07,3;UBERON:0003124,8.59e-07,7|phase1_expression=0.363356758541113,5.1384125733836,0.704772020479856,1.0007329835313,2.68176656656373,1.74467704820074,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,1.56727360739044,0,0,0.502170558379211,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0.581592955118259,0,1.21292030593908,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0,1.29096936716765,0,0.752969358170419,0.545812300115692,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.619954687054593,0,2.22540236350701,0,0.718618141816238,0,0,0,0,1.5324389789951,0.901428353439581,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,2.00169191121407,3.25572963234866,0.823240336780769,0,1.77695974371273,3.95975936466715,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,1.49801404789436,5.9832291840805,0.828831026872071,0,0,0,3.53550464602372,6.42344359669782,2.68094105557689,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0.303127571446259,0,2.72151263996712,0,0.306923946576125,2.24528075546459,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.921022048356777,0.137836572484531,0.322260734604821,2.17525040871343,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,3.84351841630477,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.14870036263921,0,3.99308912729002,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.307801034015188,0,0.23056390438806,0.0897576444097721,0.108647371922008,1.91400695839152,0.0915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0.661983911750998,0,0,0,0,0,0,0,1.2230866776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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:84884236..84884247,+ | |||
|id=chr16:84884236..84884247,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.07e-11;19!CL:0002195;2.51e-10;2!CL:0002571;2.51e-10;2!CL:0000136;5.92e-09;13!CL:0000197;4.74e-08;6!CL:0000098;4.74e-08;6!CL:0002167;4.74e-08;6!CL:0000775;2.32e-07;3!CL:0000346;2.43e-07;3!CL:1000428;2.43e-07;3!CL:0002541;2.76e-07;3!CL:0002615;3.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.88e-12,19;CL:0002195,2.18e-10,2;CL:0002571,2.18e-10,2;CL:0000197,4.69e-08,6;CL:0000098,4.69e-08,6;CL:0002167,4.69e-08,6;CL:0000136,9.77e-08,15;CL:0002541,2.04e-07,3;CL:0000775,2.18e-07,3;CL:0000346,2.80e-07,3;CL:1000428,2.80e-07,3;CL:0002615,4.48e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-08!115;UBERON:0000478!6.75e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.39e-12;24!UBERON:0005631;6.61e-08;10!UBERON:0000158;6.61e-08;10!UBERON:0000412;2.43e-07;3!UBERON:0001992;2.43e-07;3!UBERON:0003124;2.76e-07;3!UBERON:0000920;2.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,7.87e-12,24;UBERON:0005631,1.62e-08,14;UBERON:0000158,1.62e-08,14;UBERON:0000920,2.04e-07,3;UBERON:0000412,2.80e-07,3;UBERON:0001992,2.80e-07,3;UBERON:0003124,8.59e-07,7 | |||
|phase1_expression=0.363356758541113,5.1384125733836,0.704772020479856,1.0007329835313,2.68176656656373,1.74467704820074,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,1.56727360739044,0,0,0.502170558379211,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0.581592955118259,0,1.21292030593908,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0,1.29096936716765,0,0.752969358170419,0.545812300115692,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.619954687054593,0,2.22540236350701,0,0.718618141816238,0,0,0,0,1.5324389789951,0.901428353439581,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,2.00169191121407,3.25572963234866,0.823240336780769,0,1.77695974371273,3.95975936466715,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,1.49801404789436,5.9832291840805,0.828831026872071,0,0,0,3.53550464602372,6.42344359669782,2.68094105557689,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0.303127571446259,0,2.72151263996712,0,0.306923946576125,2.24528075546459,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.921022048356777,0.137836572484531,0.322260734604821,2.17525040871343,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,3.84351841630477,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.14870036263921,0,3.99308912729002,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.307801034015188,0,0.23056390438806,0.0897576444097721,0.108647371922008,1.91400695839152,0.0915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0.661983911750998,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.387956065953678,0,0.90392296312213,0,0,0,0,0,2.77488893161158,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0,0.199679000498991,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0.686791410365586,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6749457282384,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0.118193840883968,0,0.470958557103084,0.471346769748006,0,0.913158720509496,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.874238242015829,0,2.20633489578515,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.093983917979853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| |||
|short_description=p@chr16:84884236..84884247,+ | |||
}} |
Revision as of 11:50, 11 September 2013
Short description: | p@chr16:84884236..84884247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:84884236..84884247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.88e-12 | 19 |
hepatic stem cell | 2.18e-10 | 2 |
hepatic mesenchymal stem cell | 2.18e-10 | 2 |
receptor cell | 4.69e-08 | 6 |
sensory epithelial cell | 4.69e-08 | 6 |
olfactory epithelial cell | 4.69e-08 | 6 |
fat cell | 9.77e-08 | 15 |
chorionic membrane mesenchymal stem cell | 2.04e-07 | 3 |
neutrophil | 2.18e-07 | 3 |
hair follicle dermal papilla cell | 2.80e-07 | 3 |
stem cell of epidermis | 2.80e-07 | 3 |
adipocyte of omentum tissue | 4.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 7.87e-12 | 24 |
extraembryonic membrane | 1.62e-08 | 14 |
membranous layer | 1.62e-08 | 14 |
egg chorion | 2.04e-07 | 3 |
dermal papilla | 2.80e-07 | 3 |
papillary layer of dermis | 2.80e-07 | 3 |
chorion | 8.59e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.