FFCP PHASE1:Hg19::chr17:37917880..37917904,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-327bp_to_AK128436_5end|coexpression_cluster_id=C1431|description=CAGE_peak_1_at_AK128436_5end|id=chr17:37917880..37917904,-|ontology_enrichment_celltype=CL:0000542!1.88e-67!53;CL:0000051!1.88e-67!53;CL:0000838!2.46e-65!52;CL:0000945!1.26e-39!24;CL:0000826!1.26e-39!24;CL:0002087!3.73e-30!119;CL:0000738!1.74e-28!140;CL:0000988!9.21e-26!182;CL:0002031!1.96e-25!124;CL:0000037!1.68e-24!172;CL:0000566!1.68e-24!172;CL:0002032!9.20e-22!165;CL:0000837!9.20e-22!165;CL:0000084!9.44e-22!25;CL:0000827!9.44e-22!25;CL:0000236!4.05e-21!14;CL:0000791!5.90e-19!18;CL:0000789!5.90e-19!18;CL:0002420!5.90e-19!18;CL:0002419!5.90e-19!18;CL:0000790!5.90e-19!18;CL:0000080!2.07e-11!6;CL:0000625!4.97e-11!11;CL:0000624!2.51e-08!6;CL:0000623!1.45e-07!3;CL:0000825!1.45e-07!3;CL:0000817!4.40e-07!3|ontology_enrichment_celltype_v019=CL:0000945;7.37e-62;24!CL:0000236;2.46e-42;13!CL:0000542;1.06e-37;53!CL:0000623;3.44e-21;3!CL:0002087;1.29e-10;104!CL:0000625;3.76e-10;11!CL:0000785;1.95e-08;1!CL:0000819;1.95e-08;1!CL:0000946;4.25e-08;1!CL:0000786;4.25e-08;1|ontology_enrichment_celltype_v019_2=CL:0000542,1.10e-64,53;CL:0000051,1.10e-64,53;CL:0000945,4.71e-62,24;CL:0000826,4.71e-62,24;CL:0000838,5.23e-60,52;CL:0000236,1.73e-48,14;CL:0002087,2.71e-27,115;CL:0002031,1.80e-23,120;CL:0000738,1.85e-22,136;CL:0000623,4.71e-21,3;CL:0000825,4.71e-21,3;CL:0002032,2.49e-18,161;CL:0000837,2.49e-18,161;CL:0000037,2.16e-17,168;CL:0000988,2.70e-16,177;CL:0000785,1.11e-14,2;CL:0000955,1.11e-14,2;CL:0000818,1.11e-14,2;CL:0000954,1.11e-14,2;CL:0000816,1.11e-14,2;CL:0000625,3.67e-10,11;CL:0000817,4.31e-10,3;CL:0000819,1.75e-08,1;CL:0000946,6.68e-08,1;CL:0000786,6.68e-08,1;CL:0000980,6.68e-08,1|ontology_enrichment_development_v019=CL:0000051;1.06e-37;53!CL:0000954;7.82e-15;2|ontology_enrichment_disease=DOID:0060058!2.68e-12!10;DOID:2531!4.13e-08!51;DOID:0060083!4.13e-08!51|ontology_enrichment_disease_v019=DOID:0060058;3.76e-11;10!DOID:12603;1.36e-08;1!DOID:4960;1.95e-08;1!DOID:0060073;1.95e-08;1!DOID:0070004;1.95e-08;1!DOID:8675;1.95e-08;1!DOID:630;4.25e-08;1!DOID:0050177;4.25e-08;1!DOID:0050427;4.25e-08;1|ontology_enrichment_disease_v019_2=DOID:0060058,4.54e-11,10;DOID:12603,1.22e-08,1;DOID:0060073,1.75e-08,1;DOID:8675,1.75e-08,1;DOID:4960,2.02e-08,1;DOID:0070004,2.02e-08,1;DOID:630,2.69e-08,1;DOID:0050177,2.69e-08,1;DOID:0050427,2.69e-08,1|ontology_enrichment_uberon=UBERON:0000178!1.79e-14!15;UBERON:0000179!1.79e-14!15;UBERON:0000463!1.79e-14!15;UBERON:0004177!7.88e-09!7;UBERON:0002370!1.27e-07!4;UBERON:0005058!1.27e-07!4;UBERON:0009113!1.27e-07!4;UBERON:0003295!1.27e-07!4;UBERON:0005562!1.27e-07!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.738905305049512,0.944529375764151,0.393364276848904,0.383829398097213,0,0,0,0,1.08454080812422,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,3.55803701545422,2.98711155796555,3.2031678962881,0.574752439954483,1.98313461835459,0,4.55370375287559,1.76171156811282,3.05818582500183,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0.221533894583621,0.541607727530031,4.09892223122161,5.07231455483525,0.164437904603676,0.552700035571697,0,0.14828656316206,0.535081656179426,0,0.339928028092699,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0.127986611154418,1.24930726552346,1.4206635122641,0,0.403213486449465,2.67440195783507,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.1673383622212,1.2937654491571,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,1.19115887728894,0.411362273086194,0,0,0.79312517629427,0,0,0,3.90186667764009,0.28853842595289,0.569134746787313,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-327bp_to_AK128436_5end | |||
|coexpression_cluster_id=C1431 | |||
|description=CAGE_peak_1_at_AK128436_5end | |||
|id=chr17:37917880..37917904,- | |||
|ontology_enrichment_celltype=CL:0000542!1.88e-67!53;CL:0000051!1.88e-67!53;CL:0000838!2.46e-65!52;CL:0000945!1.26e-39!24;CL:0000826!1.26e-39!24;CL:0002087!3.73e-30!119;CL:0000738!1.74e-28!140;CL:0000988!9.21e-26!182;CL:0002031!1.96e-25!124;CL:0000037!1.68e-24!172;CL:0000566!1.68e-24!172;CL:0002032!9.20e-22!165;CL:0000837!9.20e-22!165;CL:0000084!9.44e-22!25;CL:0000827!9.44e-22!25;CL:0000236!4.05e-21!14;CL:0000791!5.90e-19!18;CL:0000789!5.90e-19!18;CL:0002420!5.90e-19!18;CL:0002419!5.90e-19!18;CL:0000790!5.90e-19!18;CL:0000080!2.07e-11!6;CL:0000625!4.97e-11!11;CL:0000624!2.51e-08!6;CL:0000623!1.45e-07!3;CL:0000825!1.45e-07!3;CL:0000817!4.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.37e-62;24!CL:0000236;2.46e-42;13!CL:0000542;1.06e-37;53!CL:0000623;3.44e-21;3!CL:0002087;1.29e-10;104!CL:0000625;3.76e-10;11!CL:0000785;1.95e-08;1!CL:0000819;1.95e-08;1!CL:0000946;4.25e-08;1!CL:0000786;4.25e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.10e-64,53;CL:0000051,1.10e-64,53;CL:0000945,4.71e-62,24;CL:0000826,4.71e-62,24;CL:0000838,5.23e-60,52;CL:0000236,1.73e-48,14;CL:0002087,2.71e-27,115;CL:0002031,1.80e-23,120;CL:0000738,1.85e-22,136;CL:0000623,4.71e-21,3;CL:0000825,4.71e-21,3;CL:0002032,2.49e-18,161;CL:0000837,2.49e-18,161;CL:0000037,2.16e-17,168;CL:0000988,2.70e-16,177;CL:0000785,1.11e-14,2;CL:0000955,1.11e-14,2;CL:0000818,1.11e-14,2;CL:0000954,1.11e-14,2;CL:0000816,1.11e-14,2;CL:0000625,3.67e-10,11;CL:0000817,4.31e-10,3;CL:0000819,1.75e-08,1;CL:0000946,6.68e-08,1;CL:0000786,6.68e-08,1;CL:0000980,6.68e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-37;53!CL:0000954;7.82e-15;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.68e-12!10;DOID:2531!4.13e-08!51;DOID:0060083!4.13e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.76e-11;10!DOID:12603;1.36e-08;1!DOID:4960;1.95e-08;1!DOID:0060073;1.95e-08;1!DOID:0070004;1.95e-08;1!DOID:8675;1.95e-08;1!DOID:630;4.25e-08;1!DOID:0050177;4.25e-08;1!DOID:0050427;4.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.54e-11,10;DOID:12603,1.22e-08,1;DOID:0060073,1.75e-08,1;DOID:8675,1.75e-08,1;DOID:4960,2.02e-08,1;DOID:0070004,2.02e-08,1;DOID:630,2.69e-08,1;DOID:0050177,2.69e-08,1;DOID:0050427,2.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.79e-14!15;UBERON:0000179!1.79e-14!15;UBERON:0000463!1.79e-14!15;UBERON:0004177!7.88e-09!7;UBERON:0002370!1.27e-07!4;UBERON:0005058!1.27e-07!4;UBERON:0009113!1.27e-07!4;UBERON:0003295!1.27e-07!4;UBERON:0005562!1.27e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.738905305049512,0.944529375764151,0.393364276848904,0.383829398097213,0,0,0,0,1.08454080812422,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,3.55803701545422,2.98711155796555,3.2031678962881,0.574752439954483,1.98313461835459,0,4.55370375287559,1.76171156811282,3.05818582500183,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0.221533894583621,0.541607727530031,4.09892223122161,5.07231455483525,0.164437904603676,0.552700035571697,0,0.14828656316206,0.535081656179426,0,0.339928028092699,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0.127986611154418,1.24930726552346,1.4206635122641,0,0.403213486449465,2.67440195783507,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.1673383622212,1.2937654491571,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,1.19115887728894,0.411362273086194,0,0,0.79312517629427,0,0,0,3.90186667764009,0.28853842595289,0.569134746787313,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0.593042257361244,0.86494757262552,0.835375596043643,0,0,0,2.73682183823499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0.828478110694391,0.992332043623902,0.395223263795889,1.09613338542806,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,2.41100971525142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0.201273793591026,1.9234109538194 | |||
|short_description=p1@AK128436 | |||
}} |
Revision as of 13:20, 11 September 2013
Short description: | p1@AK128436 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK128436_5end |
Coexpression cluster: | C1431_CD4_Burkitt_CD8_diffuse_tonsil_spleen_lymphoma |
Association with transcript: | -327bp_to_AK128436_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.10e-64 | 53 |
common lymphoid progenitor | 1.10e-64 | 53 |
lymphocyte of B lineage | 4.71e-62 | 24 |
pro-B cell | 4.71e-62 | 24 |
lymphoid lineage restricted progenitor cell | 5.23e-60 | 52 |
B cell | 1.73e-48 | 14 |
nongranular leukocyte | 2.71e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-23 | 120 |
leukocyte | 1.85e-22 | 136 |
natural killer cell | 4.71e-21 | 3 |
pro-NK cell | 4.71e-21 | 3 |
hematopoietic oligopotent progenitor cell | 2.49e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-18 | 161 |
hematopoietic stem cell | 2.16e-17 | 168 |
hematopoietic cell | 2.70e-16 | 177 |
mature B cell | 1.11e-14 | 2 |
pre-B-II cell | 1.11e-14 | 2 |
transitional stage B cell | 1.11e-14 | 2 |
small pre-B-II cell | 1.11e-14 | 2 |
immature B cell | 1.11e-14 | 2 |
CD8-positive, alpha-beta T cell | 3.67e-10 | 11 |
precursor B cell | 4.31e-10 | 3 |
B-1 B cell | 1.75e-08 | 1 |
antibody secreting cell | 6.68e-08 | 1 |
plasma cell | 6.68e-08 | 1 |
plasmablast | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.54e-11 | 10 |
acute leukemia | 1.22e-08 | 1 |
lymphatic system cancer | 1.75e-08 | 1 |
lymphosarcoma | 1.75e-08 | 1 |
bone marrow cancer | 2.02e-08 | 1 |
myeloma | 2.02e-08 | 1 |
genetic disease | 2.69e-08 | 1 |
monogenic disease | 2.69e-08 | 1 |
xeroderma pigmentosum | 2.69e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.