FFCP PHASE1:Hg19::chr17:39968406..39968410,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10609|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16946|TSSclassifier=S|UniProt=Q92791|association_with_transcript=40bp_to_ENST00000393928,NM_006455,uc002hxt.2_5end|description=CAGE_peak_6_at_LEPREL4_5end|id=chr17:39968406..39968410,-|ontology_enrichment_celltype=CL:0000055!6.73e-09!180|ontology_enrichment_celltype_v019=CL:0000182;2.84e-15;12!CL:0002591;2.07e-12;1!CL:1000746;3.04e-07;7!CL:1000612;3.04e-07;7!CL:0002262;4.68e-07;2!CL:1000398;4.68e-07;2!CL:0000047;7.82e-07;2!CL:0000650;7.82e-07;2!CL:1000500;7.82e-07;2!CL:1000618;7.82e-07;2!CL:1001318;7.82e-07;2!CL:0002549;7.82e-07;2!CL:0002173;7.82e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,2.74e-15,12;CL:0002591,2.46e-12,1;CL:1000746,3.24e-07,7;CL:1000612,3.24e-07,7;CL:0002262,4.56e-07,2;CL:1000398,4.56e-07,2;CL:0002549,8.06e-07,2|ontology_enrichment_development_v019=UBERON:0004161;9.53e-10;11!UBERON:0009497;2.51e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002107;9.91e-10;19!UBERON:0006925;9.91e-10;19!UBERON:0002423;1.96e-07;25!UBERON:0000353;2.79e-07;15!UBERON:0000074;3.04e-07;7!UBERON:0001229;3.04e-07;7!UBERON:0001281;4.68e-07;2!UBERON:0003497;4.68e-07;2!UBERON:0003909;4.68e-07;2!UBERON:0003835;4.68e-07;2!UBERON:0000077;7.81e-07;27!UBERON:0005629;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0003567;7.82e-07;2!UBERON:0003838;7.82e-07;2!UBERON:0003586;7.82e-07;2!UBERON:0005358;7.82e-07;2!UBERON:0005169;7.82e-07;2!UBERON:0002321;7.82e-07;2!UBERON:0001886;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0005215;7.82e-07;2!UBERON:0002303;7.82e-07;2!UBERON:0004086;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0002319;7.82e-07;2!UBERON:0005282;7.82e-07;2!UBERON:0005281;7.82e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.71e-10,19;UBERON:0006925,9.71e-10,19;UBERON:0008836,9.71e-10,19;UBERON:0008835,1.95e-08,22;UBERON:0003894,1.95e-08,22;UBERON:0009854,4.47e-08,23;UBERON:0007499,1.92e-07,25;UBERON:0009497,1.92e-07,25;UBERON:0000015,1.92e-07,25;UBERON:0002423,1.92e-07,25;UBERON:0006235,1.92e-07,25;UBERON:0004161,1.92e-07,25;UBERON:0000353,2.89e-07,15;UBERON:0010532,3.24e-07,7;UBERON:0000074,3.24e-07,7;UBERON:0001229,3.24e-07,7;UBERON:0001230,3.24e-07,7;UBERON:0003220,3.24e-07,7;UBERON:0005749,3.24e-07,7;UBERON:0004199,3.24e-07,7;UBERON:0004209,3.24e-07,7;UBERON:0004198,3.24e-07,7;UBERON:0009856,3.67e-07,26;UBERON:0003929,4.16e-07,54;UBERON:0005172,4.51e-07,54;UBERON:0005173,4.51e-07,54;UBERON:0001281,4.56e-07,2;UBERON:0003497,4.56e-07,2;UBERON:0003909,4.56e-07,2;UBERON:0003835,4.56e-07,2;UBERON:0005629,8.06e-07,2;UBERON:0005358,8.06e-07,2;UBERON:0001886,8.06e-07,2;UBERON:0004086,8.06e-07,2;UBERON:0005282,8.06e-07,2;UBERON:0005281,8.06e-07,2;UBERON:0000078,8.52e-07,2;UBERON:0007497,8.52e-07,2;UBERON:0003643,8.52e-07,2;UBERON:0003504,8.52e-07,2;UBERON:0003469,8.52e-07,2;UBERON:0003496,8.52e-07,2;UBERON:0002012,8.52e-07,2;UBERON:0008886,8.52e-07,2;UBERON:0007303,8.52e-07,2;UBERON:0002061,8.52e-07,2;UBERON:0005432,8.52e-07,2;UBERON:0004363,8.52e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0.490385709340376,0.302714855289863,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0,0.427114777637135,0,0.600182192168805,0,0.515281080091258,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0,0,0,0,0.508681776931463,0,0.272746120590835,0,0.243947412259191,0.530119073285941,0.232387885739037,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.882351781859152,0.435758888184812,0.949082476444386,0.539325232640658,0.392442930250692,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.600686115687835,0,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.2540946242224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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10609 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16946 | |||
|TSSclassifier=S | |||
|UniProt=Q92791 | |||
|association_with_transcript=40bp_to_ENST00000393928,NM_006455,uc002hxt.2_5end | |||
|description=CAGE_peak_6_at_LEPREL4_5end | |||
|id=chr17:39968406..39968410,- | |||
|ontology_enrichment_celltype=CL:0000055!6.73e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.84e-15;12!CL:0002591;2.07e-12;1!CL:1000746;3.04e-07;7!CL:1000612;3.04e-07;7!CL:0002262;4.68e-07;2!CL:1000398;4.68e-07;2!CL:0000047;7.82e-07;2!CL:0000650;7.82e-07;2!CL:1000500;7.82e-07;2!CL:1000618;7.82e-07;2!CL:1001318;7.82e-07;2!CL:0002549;7.82e-07;2!CL:0002173;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.74e-15,12;CL:0002591,2.46e-12,1;CL:1000746,3.24e-07,7;CL:1000612,3.24e-07,7;CL:0002262,4.56e-07,2;CL:1000398,4.56e-07,2;CL:0002549,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.53e-10;11!UBERON:0009497;2.51e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.91e-10;19!UBERON:0006925;9.91e-10;19!UBERON:0002423;1.96e-07;25!UBERON:0000353;2.79e-07;15!UBERON:0000074;3.04e-07;7!UBERON:0001229;3.04e-07;7!UBERON:0001281;4.68e-07;2!UBERON:0003497;4.68e-07;2!UBERON:0003909;4.68e-07;2!UBERON:0003835;4.68e-07;2!UBERON:0000077;7.81e-07;27!UBERON:0005629;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0003567;7.82e-07;2!UBERON:0003838;7.82e-07;2!UBERON:0003586;7.82e-07;2!UBERON:0005358;7.82e-07;2!UBERON:0005169;7.82e-07;2!UBERON:0002321;7.82e-07;2!UBERON:0001886;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0005215;7.82e-07;2!UBERON:0002303;7.82e-07;2!UBERON:0004086;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0002319;7.82e-07;2!UBERON:0005282;7.82e-07;2!UBERON:0005281;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.71e-10,19;UBERON:0006925,9.71e-10,19;UBERON:0008836,9.71e-10,19;UBERON:0008835,1.95e-08,22;UBERON:0003894,1.95e-08,22;UBERON:0009854,4.47e-08,23;UBERON:0007499,1.92e-07,25;UBERON:0009497,1.92e-07,25;UBERON:0000015,1.92e-07,25;UBERON:0002423,1.92e-07,25;UBERON:0006235,1.92e-07,25;UBERON:0004161,1.92e-07,25;UBERON:0000353,2.89e-07,15;UBERON:0010532,3.24e-07,7;UBERON:0000074,3.24e-07,7;UBERON:0001229,3.24e-07,7;UBERON:0001230,3.24e-07,7;UBERON:0003220,3.24e-07,7;UBERON:0005749,3.24e-07,7;UBERON:0004199,3.24e-07,7;UBERON:0004209,3.24e-07,7;UBERON:0004198,3.24e-07,7;UBERON:0009856,3.67e-07,26;UBERON:0003929,4.16e-07,54;UBERON:0005172,4.51e-07,54;UBERON:0005173,4.51e-07,54;UBERON:0001281,4.56e-07,2;UBERON:0003497,4.56e-07,2;UBERON:0003909,4.56e-07,2;UBERON:0003835,4.56e-07,2;UBERON:0005629,8.06e-07,2;UBERON:0005358,8.06e-07,2;UBERON:0001886,8.06e-07,2;UBERON:0004086,8.06e-07,2;UBERON:0005282,8.06e-07,2;UBERON:0005281,8.06e-07,2;UBERON:0000078,8.52e-07,2;UBERON:0007497,8.52e-07,2;UBERON:0003643,8.52e-07,2;UBERON:0003504,8.52e-07,2;UBERON:0003469,8.52e-07,2;UBERON:0003496,8.52e-07,2;UBERON:0002012,8.52e-07,2;UBERON:0008886,8.52e-07,2;UBERON:0007303,8.52e-07,2;UBERON:0002061,8.52e-07,2;UBERON:0005432,8.52e-07,2;UBERON:0004363,8.52e-07,2 | |||
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| |||
|short_description=p6@LEPREL4 | |||
}} |
Revision as of 13:38, 11 September 2013
Short description: | p6@LEPREL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LEPREL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000393928, NM_006455, uc002hxt.2_5end |
EntrezGene: | LEPREL4 |
HGNC: | 16946 |
UniProt: | Q92791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.74e-15 | 12 |
smooth muscle cell of the pulmonary artery | 2.46e-12 | 1 |
glomerular cell | 3.24e-07 | 7 |
kidney corpuscule cell | 3.24e-07 | 7 |
endothelial cell of sinusoid | 4.56e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.56e-07 | 2 |
fibroblast of choroid plexus | 8.06e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.