FFCP PHASE1:Hg19::chr17:75446731..75446743,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10801|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7323|TSSclassifier=S|UniProt=Q9UHD8|association_with_transcript=118bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end|coexpression_cluster_id=C368|description=CAGE_peak_36_at_SEPT9_5end|id=chr17:75446731..75446743,+|ontology_enrichment_celltype=CL:0000148!7.02e-08!10;CL:0000541!7.02e-08!10;CL:0000147!1.49e-07!14;CL:0000710!6.60e-07!20;CL:0000128!6.94e-07!7;CL:0000126!6.94e-07!7;CL:0000127!6.94e-07!7;CL:0002453!6.94e-07!7;CL:0000133!7.29e-07!59|ontology_enrichment_celltype_v019=CL:0000669;9.12e-16;4!CL:0002575;7.33e-15;2!CL:0002549;3.20e-14;2!CL:0002567;1.86e-09;3!CL:0000182;4.18e-09;12!CL:0000222;4.65e-08;1!CL:0002127;1.04e-07;1!CL:0000911;1.04e-07;1!CL:0000814;1.04e-07;1|ontology_enrichment_celltype_v019_2=CL:0000669,1.50e-15,4;CL:0002575,7.36e-15,2;CL:0002549,4.77e-14,2;CL:0002567,1.44e-09,3;CL:0000182,3.85e-09,12;CL:0002127,1.18e-07,1;CL:0000914,1.18e-07,1;CL:0000911,1.18e-07,1;CL:0000814,1.18e-07,1;CL:0002042,1.18e-07,1;CL:0002039,1.18e-07,1;CL:0002040,1.18e-07,1;CL:0002041,1.18e-07,1;CL:0002393,5.91e-07,9;CL:0002397,5.91e-07,9;CL:0000838,7.23e-07,52|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;4.65e-08;1|ontology_enrichment_disease_v019_2=DOID:2355,4.99e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005629;3.20e-14;2!UBERON:0005358;3.20e-14;2!UBERON:0001886;3.20e-14;2!UBERON:0004086;3.20e-14;2!UBERON:0005282;3.20e-14;2!UBERON:0005281;3.20e-14;2!UBERON:0005284;2.40e-12;5|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.77e-14,2;UBERON:0005358,4.77e-14,2;UBERON:0001886,4.77e-14,2;UBERON:0004086,4.77e-14,2;UBERON:0005282,4.77e-14,2;UBERON:0005281,4.77e-14,2;UBERON:0005284,4.30e-12,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.612002073732759,0.313454721478088,1.14494394852423,0.547497700291537,0.502170558379211,1.45185470921107,1.39571002064908,1.49550484495991,0.393364276848904,0,0.309632246632152,0,0,0,0,1.27952309238679,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.633765858935825,1.70083439972035,1.25795187305026,0,0,0.16072558669708,0.285012743741249,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0,0,0.541607727530031,0.512365278902701,0.520237390239513,0.164437904603676,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0.163461903113459,4.23800797405808,1.15235184896,0,0,0,0.597794722207204,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.368965315629341,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.507983154337352,0,1.17217447210047,1.71072446022705,0.719792448923265,0.300343057843917,1.14330573052231,1.68196626518041,0.87192013766656,0.51336800074665,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,1.2329365839288,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,49.9292951529988,19.9023185810296,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0.655622074797121,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,1.116475108079,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.422215270595328,0,0.75894634753143,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,1.42283686696828,0,0,0,0,0,0,4.79292825969704,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0.54323685961004,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.617819694732514,0.522109747527277,0.134802265961354,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36598618851383,0.279282401272254,0,0,0,0,0,0,0,0,3.62402638613229,4.28562463582066,3.97680908739691,0,2.2015066337104,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.37494122388632,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.887023701626388,0.230467975111559,0.342976018874837,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,1.35361564744512,0.799529247399431,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0.61193297845189,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p36@SEPT9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=S | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=118bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_36_at_SEPT9_5end | |||
|id=chr17:75446731..75446743,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.02e-08!10;CL:0000541!7.02e-08!10;CL:0000147!1.49e-07!14;CL:0000710!6.60e-07!20;CL:0000128!6.94e-07!7;CL:0000126!6.94e-07!7;CL:0000127!6.94e-07!7;CL:0002453!6.94e-07!7;CL:0000133!7.29e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000669;9.12e-16;4!CL:0002575;7.33e-15;2!CL:0002549;3.20e-14;2!CL:0002567;1.86e-09;3!CL:0000182;4.18e-09;12!CL:0000222;4.65e-08;1!CL:0002127;1.04e-07;1!CL:0000911;1.04e-07;1!CL:0000814;1.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.50e-15,4;CL:0002575,7.36e-15,2;CL:0002549,4.77e-14,2;CL:0002567,1.44e-09,3;CL:0000182,3.85e-09,12;CL:0002127,1.18e-07,1;CL:0000914,1.18e-07,1;CL:0000911,1.18e-07,1;CL:0000814,1.18e-07,1;CL:0002042,1.18e-07,1;CL:0002039,1.18e-07,1;CL:0002040,1.18e-07,1;CL:0002041,1.18e-07,1;CL:0002393,5.91e-07,9;CL:0002397,5.91e-07,9;CL:0000838,7.23e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;4.65e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.99e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.20e-14;2!UBERON:0005358;3.20e-14;2!UBERON:0001886;3.20e-14;2!UBERON:0004086;3.20e-14;2!UBERON:0005282;3.20e-14;2!UBERON:0005281;3.20e-14;2!UBERON:0005284;2.40e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.77e-14,2;UBERON:0005358,4.77e-14,2;UBERON:0001886,4.77e-14,2;UBERON:0004086,4.77e-14,2;UBERON:0005282,4.77e-14,2;UBERON:0005281,4.77e-14,2;UBERON:0005284,4.30e-12,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.612002073732759,0.313454721478088,1.14494394852423,0.547497700291537,0.502170558379211,1.45185470921107,1.39571002064908,1.49550484495991,0.393364276848904,0,0.309632246632152,0,0,0,0,1.27952309238679,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.633765858935825,1.70083439972035,1.25795187305026,0,0,0.16072558669708,0.285012743741249,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0,0,0.541607727530031,0.512365278902701,0.520237390239513,0.164437904603676,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0.163461903113459,4.23800797405808,1.15235184896,0,0,0,0.597794722207204,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.368965315629341,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.507983154337352,0,1.17217447210047,1.71072446022705,0.719792448923265,0.300343057843917,1.14330573052231,1.68196626518041,0.87192013766656,0.51336800074665,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,1.2329365839288,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,49.9292951529988,19.9023185810296,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0.655622074797121,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,1.116475108079,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.422215270595328,0,0.75894634753143,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,1.42283686696828,0,0,0,0,0,0,4.79292825969704,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0.54323685961004,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.617819694732514,0.522109747527277,0.134802265961354,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36598618851383,0.279282401272254,0,0,0,0,0,0,0,0,3.62402638613229,4.28562463582066,3.97680908739691,0,2.2015066337104,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.37494122388632,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.887023701626388,0.230467975111559,0.342976018874837,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,1.35361564744512,0.799529247399431,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0.61193297845189,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p36@SEPT9 | |||
}} |
Revision as of 15:56, 11 September 2013
Short description: | p36@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_SEPT9_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 118bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.50e-15 | 4 |
central nervous system pericyte | 7.36e-15 | 2 |
fibroblast of choroid plexus | 4.77e-14 | 2 |
light melanocyte | 1.44e-09 | 3 |
hepatocyte | 3.85e-09 | 12 |
innate effector T cell | 1.18e-07 | 1 |
immature NK T cell | 1.18e-07 | 1 |
effector T cell | 1.18e-07 | 1 |
mature NK T cell | 1.18e-07 | 1 |
immature NK T cell stage IV | 1.18e-07 | 1 |
immature NK T cell stage I | 1.18e-07 | 1 |
immature NK T cell stage II | 1.18e-07 | 1 |
immature NK T cell stage III | 1.18e-07 | 1 |
intermediate monocyte | 5.91e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.91e-07 | 9 |
lymphoid lineage restricted progenitor cell | 7.23e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 4.77e-14 | 2 |
ventricle of nervous system | 4.77e-14 | 2 |
choroid plexus | 4.77e-14 | 2 |
brain ventricle | 4.77e-14 | 2 |
ventricular system of brain | 4.77e-14 | 2 |
ventricular system of central nervous system | 4.77e-14 | 2 |
brain vasculature | 4.30e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.99e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.