FFCP PHASE1:Hg19::chr19:39898772..39898888,-: Difference between revisions
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{{FFCP | 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376,12.9409176016797,4.32626562123789,0.126166424835079,0,0.253397002022874,0.305966489225945,0,0.0918948995348449,0.250707539292375,6.36541065033211,1.07185652062471,10.7792027129641,1.75836092965222,4.69114760182158,6.42773964952099,2.00225620491619,2.60713800042603,0.784923038064294,3.6278880218554,26.8815861314432,19.1590738149326,13.6893320434112,6.19638887734205,9.96938654958201,5.32256570473621,0.162806537221949,1.92109222579888,0,1.16772762738563,14.0784565442073,2.93379466038879,1.62758471326295,8.65483806441166,8.4534993308231,2.56454793842586|short_description=p1@CU679444}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=449bp_to_CU679444_5end | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_1_at_CU679444_5end | |||
|id=chr19:39898772..39898888,- | |||
|ontology_enrichment_celltype=CL:0002057!3.12e-20!42;CL:0000766!1.13e-19!76;CL:0000860!2.81e-18!45;CL:0000557!1.14e-16!71;CL:0002009!1.22e-16!65;CL:0000738!2.35e-16!140;CL:0002194!1.33e-15!63;CL:0000576!1.33e-15!63;CL:0000040!1.33e-15!63;CL:0000559!1.33e-15!63;CL:0000839!2.82e-14!70;CL:0002087!2.33e-12!119;CL:0002031!1.22e-11!124;CL:0000763!5.22e-09!112;CL:0000049!5.22e-09!112;CL:0000037!8.20e-09!172;CL:0000566!8.20e-09!172;CL:0000988!4.99e-08!182;CL:0002032!6.29e-08!165;CL:0000837!6.29e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.67e-17;33!CL:0002057;3.67e-17;33!CL:0000576;2.12e-14;48!CL:0000473;8.40e-14;39!CL:0000234;8.40e-14;39!CL:0000766;9.63e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.24e-23,72;CL:0000860,1.79e-23,42;CL:0002057,1.79e-23,42;CL:0000473,3.79e-22,48;CL:0000234,3.79e-22,48;CL:0000557,5.15e-20,67;CL:0002009,1.25e-19,61;CL:0000738,1.13e-18,136;CL:0002194,2.19e-18,59;CL:0000576,2.19e-18,59;CL:0000040,2.19e-18,59;CL:0000559,2.19e-18,59;CL:0000839,1.58e-17,66;CL:0002087,4.88e-14,115;CL:0002031,9.04e-14,120;CL:0000763,1.94e-11,108;CL:0000049,1.94e-11,108;CL:0000037,1.19e-10,168;CL:0000988,7.93e-10,177;CL:0002032,9.33e-10,161;CL:0000837,9.33e-10,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.31e-19!102;UBERON:0003061!5.31e-19!102;UBERON:0002193!9.70e-18!112;UBERON:0007023!3.49e-16!115;UBERON:0002371!1.66e-14!80;UBERON:0002405!2.24e-12!115;UBERON:0001474!3.52e-12!86;UBERON:0004765!2.61e-11!101;UBERON:0001434!2.61e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.91e-22,98;UBERON:0003061,2.91e-22,98;UBERON:0002193,3.38e-20,108;UBERON:0002371,1.27e-17,76;UBERON:0007023,7.07e-17,114;UBERON:0004765,8.03e-16,90;UBERON:0001474,1.92e-15,82;UBERON:0002405,3.77e-15,93;UBERON:0001434,1.23e-14,100;UBERON:0003081,7.43e-07,203 | |||
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| |||
|short_description=p1@CU679444 | |||
}} |
Revision as of 20:35, 11 September 2013
Short description: | p1@CU679444 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CU679444_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | 449bp_to_CU679444_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.24e-23 | 72 |
classical monocyte | 1.79e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-23 | 42 |
defensive cell | 3.79e-22 | 48 |
phagocyte | 3.79e-22 | 48 |
granulocyte monocyte progenitor cell | 5.15e-20 | 67 |
macrophage dendritic cell progenitor | 1.25e-19 | 61 |
leukocyte | 1.13e-18 | 136 |
monopoietic cell | 2.19e-18 | 59 |
monocyte | 2.19e-18 | 59 |
monoblast | 2.19e-18 | 59 |
promonocyte | 2.19e-18 | 59 |
myeloid lineage restricted progenitor cell | 1.58e-17 | 66 |
nongranular leukocyte | 4.88e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 9.04e-14 | 120 |
myeloid cell | 1.94e-11 | 108 |
common myeloid progenitor | 1.94e-11 | 108 |
hematopoietic stem cell | 1.19e-10 | 168 |
hematopoietic cell | 7.93e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.33e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.91e-22 | 98 |
blood island | 2.91e-22 | 98 |
hemolymphoid system | 3.38e-20 | 108 |
bone marrow | 1.27e-17 | 76 |
adult organism | 7.07e-17 | 114 |
skeletal element | 8.03e-16 | 90 |
bone element | 1.92e-15 | 82 |
immune system | 3.77e-15 | 93 |
skeletal system | 1.23e-14 | 100 |
lateral plate mesoderm | 7.43e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.