FFCP PHASE1:Hg19::chr1:109133646..109133666,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr1:109133646..109133666,-|id=chr1:109133646..109133666,-|ontology_enrichment_celltype=CL:0002057!4.73e-81!42;CL:0000860!7.78e-79!45;CL:0000766!4.55e-58!76;CL:0000839!3.52e-54!70;CL:0000557!2.92e-53!71;CL:0000738!4.48e-52!140;CL:0002194!4.51e-52!63;CL:0000576!4.51e-52!63;CL:0000040!4.51e-52!63;CL:0000559!4.51e-52!63;CL:0002009!3.74e-50!65;CL:0002087!3.49e-49!119;CL:0002031!1.51e-46!124;CL:0000037!7.11e-43!172;CL:0000566!7.11e-43!172;CL:0000988!1.11e-39!182;CL:0002032!2.76e-38!165;CL:0000837!2.76e-38!165;CL:0000763!2.30e-37!112;CL:0000049!2.30e-37!112;CL:0000134!3.56e-18!358;CL:0002320!1.62e-17!365;CL:0002393!7.44e-17!9;CL:0002397!7.44e-17!9;CL:0000219!3.38e-15!390;CL:0000034!5.69e-13!444;CL:0000048!1.97e-12!430;CL:0000723!4.84e-12!436;CL:0000624!4.02e-11!6;CL:0000767!9.56e-10!3;CL:0000623!1.13e-09!3;CL:0000825!1.13e-09!3;CL:0000842!1.15e-08!3;CL:0000791!1.95e-08!18;CL:0000789!1.95e-08!18;CL:0002420!1.95e-08!18;CL:0002419!1.95e-08!18;CL:0000790!1.95e-08!18|ontology_enrichment_celltype_v019=CL:0000860;3.68e-25;33!CL:0002057;3.68e-25;33!CL:0000767;8.22e-22;3!CL:0000623;1.33e-21;3!CL:0000473;2.96e-17;39!CL:0000234;2.96e-17;39!CL:0000576;3.54e-17;48!CL:0000766;2.21e-13;69!CL:0002087;6.45e-10;104!CL:0000226;9.59e-10;3!CL:0000842;9.59e-10;3!CL:0000094;1.71e-08;8|ontology_enrichment_celltype_v019_2=CL:0000738,4.52e-31,136;CL:0000860,2.08e-28,42;CL:0002057,2.08e-28,42;CL:0000766,3.15e-26,72;CL:0002087,3.60e-26,115;CL:0000473,1.61e-24,48;CL:0000234,1.61e-24,48;CL:0000037,2.73e-24,168;CL:0000988,8.07e-23,177;CL:0002031,1.52e-22,120;CL:0000767,7.95e-22,3;CL:0000623,1.20e-21,3;CL:0000825,1.20e-21,3;CL:0002032,2.03e-21,161;CL:0000837,2.03e-21,161;CL:0000839,2.17e-19,66;CL:0002194,4.50e-19,59;CL:0000576,4.50e-19,59;CL:0000040,4.50e-19,59;CL:0000559,4.50e-19,59;CL:0000557,4.63e-19,67;CL:0002009,2.27e-18,61;CL:0000763,2.21e-16,108;CL:0000049,2.21e-16,108;CL:0000226,1.03e-09,3;CL:0000842,1.03e-09,3;CL:0000134,5.52e-09,354;CL:0002320,1.03e-08,361;CL:0000094,1.69e-08,8;CL:0000219,9.34e-08,386;CL:0000034,5.56e-07,441|ontology_enrichment_development_v019=CL:0002057;1.88e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.93e-48!80;UBERON:0001474!2.88e-44!86;UBERON:0002390!5.23e-44!102;UBERON:0003061!5.23e-44!102;UBERON:0002193!5.69e-39!112;UBERON:0004765!5.45e-36!101;UBERON:0001434!5.45e-36!101;UBERON:0002405!1.13e-33!115;UBERON:0002204!2.71e-17!167;UBERON:0002384!1.28e-16!375;UBERON:0003081!4.22e-16!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.73e-16,76;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001474,4.38e-15,82;UBERON:0002193,3.16e-14,108;UBERON:0004765,1.68e-13,90;UBERON:0002405,5.62e-13,93;UBERON:0001434,7.11e-12,100;UBERON:0002384,2.42e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08055698328027,8.06041736004147,4.64448369948228,0,0,0,0,0,0.293600439334847,4.43196326825502,0.401088894940283,1.08505435357926,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,0.697287110717054,0.822335776043652,2.47765096716083,0,1.0246428261164,3.78371567821736,1.37898272294647,0.645484683583826,5.41705946377367,0.564727018627814,1.63743690034707,4.49446968890169,2.14258724659632,0.962787081228281,3.19668562899521,0.659702600373432,0.797854630486527,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,1.5644487552606,6.73285418585862,0,0.368277635987565,2.21523671208619,0.422510572623884,0.425208599930087,0.628975936525128,0.336985893439485,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.983548850569165,2.35806457649499,0.616804496998528,0,0,0,0,0.111410456885174,0.883817722424512,0.443067789167242,0.541607727530031,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,1.03088233644789,1.77113784413652,0,0,0,0,0,0,0,0,3.22570789159572,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91092280605782,4.74380664690938,5.00537841491019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr1:109133646..109133666,- | |||
|id=chr1:109133646..109133666,- | |||
|ontology_enrichment_celltype=CL:0002057!4.73e-81!42;CL:0000860!7.78e-79!45;CL:0000766!4.55e-58!76;CL:0000839!3.52e-54!70;CL:0000557!2.92e-53!71;CL:0000738!4.48e-52!140;CL:0002194!4.51e-52!63;CL:0000576!4.51e-52!63;CL:0000040!4.51e-52!63;CL:0000559!4.51e-52!63;CL:0002009!3.74e-50!65;CL:0002087!3.49e-49!119;CL:0002031!1.51e-46!124;CL:0000037!7.11e-43!172;CL:0000566!7.11e-43!172;CL:0000988!1.11e-39!182;CL:0002032!2.76e-38!165;CL:0000837!2.76e-38!165;CL:0000763!2.30e-37!112;CL:0000049!2.30e-37!112;CL:0000134!3.56e-18!358;CL:0002320!1.62e-17!365;CL:0002393!7.44e-17!9;CL:0002397!7.44e-17!9;CL:0000219!3.38e-15!390;CL:0000034!5.69e-13!444;CL:0000048!1.97e-12!430;CL:0000723!4.84e-12!436;CL:0000624!4.02e-11!6;CL:0000767!9.56e-10!3;CL:0000623!1.13e-09!3;CL:0000825!1.13e-09!3;CL:0000842!1.15e-08!3;CL:0000791!1.95e-08!18;CL:0000789!1.95e-08!18;CL:0002420!1.95e-08!18;CL:0002419!1.95e-08!18;CL:0000790!1.95e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-25;33!CL:0002057;3.68e-25;33!CL:0000767;8.22e-22;3!CL:0000623;1.33e-21;3!CL:0000473;2.96e-17;39!CL:0000234;2.96e-17;39!CL:0000576;3.54e-17;48!CL:0000766;2.21e-13;69!CL:0002087;6.45e-10;104!CL:0000226;9.59e-10;3!CL:0000842;9.59e-10;3!CL:0000094;1.71e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.52e-31,136;CL:0000860,2.08e-28,42;CL:0002057,2.08e-28,42;CL:0000766,3.15e-26,72;CL:0002087,3.60e-26,115;CL:0000473,1.61e-24,48;CL:0000234,1.61e-24,48;CL:0000037,2.73e-24,168;CL:0000988,8.07e-23,177;CL:0002031,1.52e-22,120;CL:0000767,7.95e-22,3;CL:0000623,1.20e-21,3;CL:0000825,1.20e-21,3;CL:0002032,2.03e-21,161;CL:0000837,2.03e-21,161;CL:0000839,2.17e-19,66;CL:0002194,4.50e-19,59;CL:0000576,4.50e-19,59;CL:0000040,4.50e-19,59;CL:0000559,4.50e-19,59;CL:0000557,4.63e-19,67;CL:0002009,2.27e-18,61;CL:0000763,2.21e-16,108;CL:0000049,2.21e-16,108;CL:0000226,1.03e-09,3;CL:0000842,1.03e-09,3;CL:0000134,5.52e-09,354;CL:0002320,1.03e-08,361;CL:0000094,1.69e-08,8;CL:0000219,9.34e-08,386;CL:0000034,5.56e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.93e-48!80;UBERON:0001474!2.88e-44!86;UBERON:0002390!5.23e-44!102;UBERON:0003061!5.23e-44!102;UBERON:0002193!5.69e-39!112;UBERON:0004765!5.45e-36!101;UBERON:0001434!5.45e-36!101;UBERON:0002405!1.13e-33!115;UBERON:0002204!2.71e-17!167;UBERON:0002384!1.28e-16!375;UBERON:0003081!4.22e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.73e-16,76;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001474,4.38e-15,82;UBERON:0002193,3.16e-14,108;UBERON:0004765,1.68e-13,90;UBERON:0002405,5.62e-13,93;UBERON:0001434,7.11e-12,100;UBERON:0002384,2.42e-08,371 | |||
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|short_description=p@chr1:109133646..109133666,- | |||
}} |
Revision as of 23:17, 11 September 2013
Short description: | p@chr1:109133646..109133666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:109133646..109133666, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.52e-31 | 136 |
classical monocyte | 2.08e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-28 | 42 |
myeloid leukocyte | 3.15e-26 | 72 |
nongranular leukocyte | 3.60e-26 | 115 |
defensive cell | 1.61e-24 | 48 |
phagocyte | 1.61e-24 | 48 |
hematopoietic stem cell | 2.73e-24 | 168 |
hematopoietic cell | 8.07e-23 | 177 |
hematopoietic lineage restricted progenitor cell | 1.52e-22 | 120 |
basophil | 7.95e-22 | 3 |
natural killer cell | 1.20e-21 | 3 |
pro-NK cell | 1.20e-21 | 3 |
hematopoietic oligopotent progenitor cell | 2.03e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-21 | 161 |
myeloid lineage restricted progenitor cell | 2.17e-19 | 66 |
monopoietic cell | 4.50e-19 | 59 |
monocyte | 4.50e-19 | 59 |
monoblast | 4.50e-19 | 59 |
promonocyte | 4.50e-19 | 59 |
granulocyte monocyte progenitor cell | 4.63e-19 | 67 |
macrophage dendritic cell progenitor | 2.27e-18 | 61 |
myeloid cell | 2.21e-16 | 108 |
common myeloid progenitor | 2.21e-16 | 108 |
single nucleate cell | 1.03e-09 | 3 |
mononuclear cell | 1.03e-09 | 3 |
mesenchymal cell | 5.52e-09 | 354 |
connective tissue cell | 1.03e-08 | 361 |
granulocyte | 1.69e-08 | 8 |
motile cell | 9.34e-08 | 386 |
stem cell | 5.56e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.73e-16 | 76 |
hematopoietic system | 5.28e-16 | 98 |
blood island | 5.28e-16 | 98 |
bone element | 4.38e-15 | 82 |
hemolymphoid system | 3.16e-14 | 108 |
skeletal element | 1.68e-13 | 90 |
immune system | 5.62e-13 | 93 |
skeletal system | 7.11e-12 | 100 |
connective tissue | 2.42e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.