FFCP PHASE1:Hg19::chr1:223986356..223986361,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7159|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12000|TSSclassifier=N|UniProt=Q13625|association_with_transcript=-305bp_to_U09582_5end|description=CAGE_peak_15_at_TP53BP2_5end|id=chr1:223986356..223986361,-|ontology_enrichment_celltype=CL:0002057!2.74e-08!42;CL:0000860!3.85e-07!45|ontology_enrichment_celltype_v019=CL:0000860;7.25e-20;33!CL:0002057;7.25e-20;33!CL:0000473;2.60e-18;39!CL:0000234;2.60e-18;39!CL:0000576;1.80e-09;48!CL:0000766;8.45e-08;69|ontology_enrichment_celltype_v019_2=CL:0000473,7.83e-19,48;CL:0000234,7.83e-19,48;CL:0000860,4.54e-17,42;CL:0002057,4.54e-17,42;CL:0002194,7.34e-15,59;CL:0000576,7.34e-15,59;CL:0000040,7.34e-15,59;CL:0000559,7.34e-15,59;CL:0002009,2.39e-14,61;CL:0000839,3.38e-13,66;CL:0000557,5.48e-13,67;CL:0000766,5.03e-12,72;CL:0000763,1.09e-07,108;CL:0000049,1.09e-07,108;CL:0002087,3.72e-07,115;CL:0002031,8.19e-07,120|ontology_enrichment_development_v019=CL:0002057;1.20e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;3.81e-07;2|ontology_enrichment_disease_v019_2=DOID:4468,4.69e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002771;3.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-11,76;UBERON:0001474,1.91e-10,82;UBERON:0004765,1.98e-09,90;UBERON:0002405,4.29e-09,93;UBERON:0002390,1.41e-08,98;UBERON:0003061,1.41e-08,98;UBERON:0001434,2.19e-08,100;UBERON:0002193,1.09e-07,108;UBERON:0002771,2.58e-07,2|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0.223915474239924,0,0,0,0.755751887377619,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,2.06847408441971,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0,3.06083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.580418477257168,0.56738522469114,1.24564449799115,0.75374599577023,1.0429658368404,0.434377689410233,1.21079900526674,0,1.58231193720442,0.211255286311942,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,4.21667878966063,0.239624855491583,0,0,0,0.205476322550383,0.537182889719687,0,0,0.215627574859517,0.385029108839245,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.462092022626489,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0.384380134730212,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0.281338832821026,0,0.164803874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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12000 | |||
|TSSclassifier=N | |||
|UniProt=Q13625 | |||
|association_with_transcript=-305bp_to_U09582_5end | |||
|description=CAGE_peak_15_at_TP53BP2_5end | |||
|id=chr1:223986356..223986361,- | |||
|ontology_enrichment_celltype=CL:0002057!2.74e-08!42;CL:0000860!3.85e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.25e-20;33!CL:0002057;7.25e-20;33!CL:0000473;2.60e-18;39!CL:0000234;2.60e-18;39!CL:0000576;1.80e-09;48!CL:0000766;8.45e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.83e-19,48;CL:0000234,7.83e-19,48;CL:0000860,4.54e-17,42;CL:0002057,4.54e-17,42;CL:0002194,7.34e-15,59;CL:0000576,7.34e-15,59;CL:0000040,7.34e-15,59;CL:0000559,7.34e-15,59;CL:0002009,2.39e-14,61;CL:0000839,3.38e-13,66;CL:0000557,5.48e-13,67;CL:0000766,5.03e-12,72;CL:0000763,1.09e-07,108;CL:0000049,1.09e-07,108;CL:0002087,3.72e-07,115;CL:0002031,8.19e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.69e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-11,76;UBERON:0001474,1.91e-10,82;UBERON:0004765,1.98e-09,90;UBERON:0002405,4.29e-09,93;UBERON:0002390,1.41e-08,98;UBERON:0003061,1.41e-08,98;UBERON:0001434,2.19e-08,100;UBERON:0002193,1.09e-07,108;UBERON:0002771,2.58e-07,2 | |||
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| |||
|short_description=p15@TP53BP2 | |||
}} |
Revision as of 03:52, 12 September 2013
Short description: | p15@TP53BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TP53BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -305bp_to_U09582_5end |
EntrezGene: | TP53BP2 |
HGNC: | 12000 |
UniProt: | Q13625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.83e-19 | 48 |
phagocyte | 7.83e-19 | 48 |
classical monocyte | 4.54e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.54e-17 | 42 |
monopoietic cell | 7.34e-15 | 59 |
monocyte | 7.34e-15 | 59 |
monoblast | 7.34e-15 | 59 |
promonocyte | 7.34e-15 | 59 |
macrophage dendritic cell progenitor | 2.39e-14 | 61 |
myeloid lineage restricted progenitor cell | 3.38e-13 | 66 |
granulocyte monocyte progenitor cell | 5.48e-13 | 67 |
myeloid leukocyte | 5.03e-12 | 72 |
myeloid cell | 1.09e-07 | 108 |
common myeloid progenitor | 1.09e-07 | 108 |
nongranular leukocyte | 3.72e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 8.19e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-11 | 76 |
bone element | 1.91e-10 | 82 |
skeletal element | 1.98e-09 | 90 |
immune system | 4.29e-09 | 93 |
hematopoietic system | 1.41e-08 | 98 |
blood island | 1.41e-08 | 98 |
skeletal system | 2.19e-08 | 100 |
hemolymphoid system | 1.09e-07 | 108 |
middle temporal gyrus | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.