FFCP PHASE1:Hg19::chr1:40507086..40507106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:40507086..40507106,+|id=chr1:40507086..40507106,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002166;7.86e-20;3!CL:0002159;1.02e-09;14!CL:0000317;2.07e-08;2!CL:1000448;2.07e-08;2!CL:0002308;2.07e-08;2!CL:0002140;2.07e-08;2|ontology_enrichment_celltype_v019_2=CL:0002166,6.50e-20,3;CL:0002159,1.04e-09,14;CL:0000317,2.48e-08,2;CL:1000448,2.48e-08,2;CL:0002308,2.48e-08,2;CL:0002140,2.48e-08,2|ontology_enrichment_development_v019=UBERON:0005425;1.66e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001708;3.94e-15;4!UBERON:0008895;3.94e-15;4!UBERON:0011159;2.66e-12;5!UBERON:0002419;2.07e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0007771;2.07e-08;2!UBERON:0003297;2.07e-08;2!UBERON:0001821;2.07e-08;2!UBERON:0003487;2.07e-08;2!UBERON:0001820;2.07e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.54e-15,1;UBERON:0001785,1.54e-15,1;UBERON:0002464,1.54e-15,1;UBERON:0004904,1.54e-15,1;UBERON:0001021,1.54e-15,1;UBERON:0003902,1.54e-15,1;UBERON:0005425,1.54e-15,1;UBERON:0001708,3.42e-15,4;UBERON:0008895,3.42e-15,4;UBERON:0011159,2.38e-12,5;UBERON:0010188,1.90e-10,6;UBERON:0002539,1.90e-10,6;UBERON:0008816,1.90e-10,6;UBERON:0003714,2.00e-08,2;UBERON:0005162,2.00e-08,2;UBERON:0000122,2.00e-08,2;UBERON:0002419,2.48e-08,2;UBERON:0007771,2.48e-08,2;UBERON:0003297,2.48e-08,2;UBERON:0001821,2.48e-08,2;UBERON:0003487,2.48e-08,2;UBERON:0001820,2.48e-08,2;UBERON:0005089,2.48e-08,2;UBERON:0005088,2.48e-08,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.680593098960126,0.179389635688862,0,0,0.600182192168805,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0.201504196455281,0.339121184620975,0.386521706326594,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.761016608938393,0,0,0,0,0.148631162288728,0.93733833986777,1.34385702559088,1.70130116690864,0.179117045405697,0,0,0,0.264145302039678,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0.614481528616916,0,0.333698283423817,0,0,0,1.89318974933188,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.409074730008619,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,5.68566159353869,0,0.195984794828755,0,0,0.51595809741485,0.0967563312890851,0,0,0,0.794305140223502,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0.169346664131569,0,0,0,0.137539436597234,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,3.051222451857,0.542999601753713,1.72844298240254,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0,0.265841714557995,1.04349012362347,0,1.90402606084398,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0,0.398594520940089,0.654261577023377,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p@chr1:40507086..40507106,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:40507086..40507106,+ | |||
|id=chr1:40507086..40507106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.86e-20;3!CL:0002159;1.02e-09;14!CL:0000317;2.07e-08;2!CL:1000448;2.07e-08;2!CL:0002308;2.07e-08;2!CL:0002140;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,6.50e-20,3;CL:0002159,1.04e-09,14;CL:0000317,2.48e-08,2;CL:1000448,2.48e-08,2;CL:0002308,2.48e-08,2;CL:0002140,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.66e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001708;3.94e-15;4!UBERON:0008895;3.94e-15;4!UBERON:0011159;2.66e-12;5!UBERON:0002419;2.07e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0007771;2.07e-08;2!UBERON:0003297;2.07e-08;2!UBERON:0001821;2.07e-08;2!UBERON:0003487;2.07e-08;2!UBERON:0001820;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.54e-15,1;UBERON:0001785,1.54e-15,1;UBERON:0002464,1.54e-15,1;UBERON:0004904,1.54e-15,1;UBERON:0001021,1.54e-15,1;UBERON:0003902,1.54e-15,1;UBERON:0005425,1.54e-15,1;UBERON:0001708,3.42e-15,4;UBERON:0008895,3.42e-15,4;UBERON:0011159,2.38e-12,5;UBERON:0010188,1.90e-10,6;UBERON:0002539,1.90e-10,6;UBERON:0008816,1.90e-10,6;UBERON:0003714,2.00e-08,2;UBERON:0005162,2.00e-08,2;UBERON:0000122,2.00e-08,2;UBERON:0002419,2.48e-08,2;UBERON:0007771,2.48e-08,2;UBERON:0003297,2.48e-08,2;UBERON:0001821,2.48e-08,2;UBERON:0003487,2.48e-08,2;UBERON:0001820,2.48e-08,2;UBERON:0005089,2.48e-08,2;UBERON:0005088,2.48e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.680593098960126,0.179389635688862,0,0,0.600182192168805,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0.201504196455281,0.339121184620975,0.386521706326594,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.761016608938393,0,0,0,0,0.148631162288728,0.93733833986777,1.34385702559088,1.70130116690864,0.179117045405697,0,0,0,0.264145302039678,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0.614481528616916,0,0.333698283423817,0,0,0,1.89318974933188,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.409074730008619,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,5.68566159353869,0,0.195984794828755,0,0,0.51595809741485,0.0967563312890851,0,0,0,0.794305140223502,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0.169346664131569,0,0,0,0.137539436597234,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,3.051222451857,0.542999601753713,1.72844298240254,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0,0.265841714557995,1.04349012362347,0,1.90402606084398,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0,0.398594520940089,0.654261577023377,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr1:40507086..40507106,+ | |||
}} |
Revision as of 05:41, 12 September 2013
Short description: | p@chr1:40507086..40507106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40507086..40507106, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 6.50e-20 | 3 |
general ecto-epithelial cell | 1.04e-09 | 14 |
sebum secreting cell | 2.48e-08 | 2 |
epithelial cell of sweat gland | 2.48e-08 | 2 |
epithelial cell of skin gland | 2.48e-08 | 2 |
acinar cell of sebaceous gland | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.54e-15 | 1 |
cranial nerve | 1.54e-15 | 1 |
nerve trunk | 1.54e-15 | 1 |
nerve connecting eye with brain | 1.54e-15 | 1 |
nerve | 1.54e-15 | 1 |
retinal neural layer | 1.54e-15 | 1 |
presumptive neural retina | 1.54e-15 | 1 |
jaw skeleton | 3.42e-15 | 4 |
splanchnocranium | 3.42e-15 | 4 |
primary subdivision of cranial skeletal system | 2.38e-12 | 5 |
protuberance | 1.90e-10 | 6 |
pharyngeal arch | 1.90e-10 | 6 |
embryonic head | 1.90e-10 | 6 |
neural tissue | 2.00e-08 | 2 |
multi cell component structure | 2.00e-08 | 2 |
neuron projection bundle | 2.00e-08 | 2 |
skin gland | 2.48e-08 | 2 |
epidermis gland | 2.48e-08 | 2 |
gland of integumental system | 2.48e-08 | 2 |
sebaceous gland | 2.48e-08 | 2 |
skin sebaceous gland | 2.48e-08 | 2 |
sweat gland | 2.48e-08 | 2 |
sweat gland placode | 2.48e-08 | 2 |
sebaceous gland placode | 2.48e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.