FFCP PHASE1:Hg19::chr20:3776371..3776506,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=994|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1726|TSSclassifier=S|UniProt=P30305,B3KS38,Q6MZW8|association_with_transcript=0bp_to_ENST00000245960,ENST00000467519,NM_004358,NM_021872,NM_021873,uc002wjl.2,uc002wjm.2,uc002wjn.2,uc002wjo.2,uc002wjp.2_5end|description=CAGE_peak_2_at_CDC25B_5end|id=chr20:3776371..3776506,+|ontology_enrichment_celltype=CL:0000838!2.87e-17!52;CL:0000542!1.04e-16!53;CL:0000051!1.04e-16!53;CL:0000084!9.88e-13!25;CL:0000827!9.88e-13!25;CL:0000791!9.43e-12!18;CL:0000789!9.43e-12!18;CL:0002420!9.43e-12!18;CL:0002419!9.43e-12!18;CL:0000790!9.43e-12!18;CL:0000625!3.65e-08!11;CL:0002087!1.90e-07!119|ontology_enrichment_celltype_v019=CL:0000084;9.47e-13;25!CL:0000791;9.65e-12;18!CL:0000789;9.65e-12;18!CL:0002419;9.65e-12;18!CL:0000542;2.10e-10;53!CL:0000625;3.69e-08;11|ontology_enrichment_celltype_v019_2=CL:0000838,2.75e-17,52;CL:0000542,1.00e-16,53;CL:0000051,1.00e-16,53;CL:0000084,9.86e-13,25;CL:0000827,9.86e-13,25;CL:0000791,9.41e-12,18;CL:0000789,9.41e-12,18;CL:0002420,9.41e-12,18;CL:0002419,9.41e-12,18;CL:0000790,9.41e-12,18;CL:0002087,8.04e-09,115;CL:0000625,3.64e-08,11;CL:0002031,1.50e-07,120|ontology_enrichment_development_v019=CL:0000790;9.65e-12;18!CL:0000051;2.10e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.95e-09!15;UBERON:0000179!4.95e-09!15;UBERON:0000463!4.95e-09!15;UBERON:0007023!7.01e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;4.97e-09;15!UBERON:0000179;4.97e-09;15!UBERON:0000463;4.97e-09;15!UBERON:0002390;1.53e-08;32!UBERON:0002193;1.79e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.94e-09,15;UBERON:0000179,4.94e-09,15;UBERON:0000463,4.94e-09,15|phase1_expression=9.99231085988061,10.7050261945492,9.3029906703341,2.00146596706261,11.1740273606822,6.10636966870258,10.1319951267324,13.2661173419635,9.66386824339403,5.16041266653169,16.7472280313383,19.4412821195853,14.7709507807934,6.93091576576261,8.94772914465373,3.36162573225888,8.43772339233568,4.38186054232424,4.87932798790507,11.9427426334484,11.6280394009224,5.95563970808367,6.29719171688325,6.15934912827979,5.27279086298172,15.8175749898259,13.0539937225414,17.1589503263821,12.9810211360138,21.4944462934439,11.7660253720218,2.75826367343678,6.32532429434325,8.8740962440029,24.2472337816344,13.7904155512799,7.92721186204087,12.1878989877013,21.257711431835,19.096956622995,18.8088998361536,15.546895968911,15.9696851933196,9.16008904311258,5.29026321164333,8.9756102639492,13.0160260667183,10.2791972005456,7.43295290148249,7.19230980805376,6.91633907628572,3.54723344832878,9.3081333798887,3.87290810150296,1.35426486594342,14.306417805238,6.82265375144614,2.9214052977861,11.9372718024652,7.06043859567406,7.67204550958849,9.23583640522805,6.98122801675712,3.40979800426155,9.57690487474327,7.37600792098482,4.9825779919646,12.0599359323237,6.25779502104242,6.29847649644838,5.44859552370032,4.41933163185078,1.89877432464531,8.66146673878961,11.0554235981823,7.54771123830153,4.94245977044578,5.10601435661121,10.125711961916,4.56020389985998,6.16641699317179,7.67189445811463,21.1195493353587,21.2994058392231,20.4587128388618,12.8019066769952,13.6134635592244,17.2425731986345,19.8313461835459,11.4486450544244,33.5835651774575,30.5363338472888,35.9336834437715,1.32171328579026,9.52864557068611,7.90152254325231,41.5057614940188,45.1962377161539,36.5970668219126,15.3811575759424,22.4886363977177,20.3582556465935,40.9136129656614,13.0350234555653,14.7302953737419,10.8551608345974,25.1847593301464,14.602410448727,15.997299749865,16.6082283649713,22.9370514762254,12.4615326866073,32.4747573324912,35.8504709640216,67.9480904732349,18.016185488913,18.7778041864941,19.9303918379925,37.6999341109059,31.5379760180856,27.3455050619696,22.810849066761,31.9219252444878,31.4847063439869,24.9861453104692,31.4913745218542,22.9915839137893,49.5952588332842,47.3369146536808,50.8333657628624,12.1903433156981,9.38981203585091,5.11450247374121,5.42158728576849,12.0321098552613,11.2980284789442,19.8821486762775,12.6525066278685,4.82127567536746,5.32150553910154,5.70926107005319,10.019899275575,7.65020105414339,7.41568885568859,12.332800958878,15.1492871450362,16.0879132227827,4.29283123749616,0.571994910780128,2.97166001063652,15.9009925893364,12.9035189265919,7.63709103536707,13.0020826642522,13.423981958717,10.1793675517825,16.510602356408,15.2465887909904,17.7883131343355,12.7193832850575,14.9046847330384,3.80136052859256,19.0368404887572,15.4418493745265,12.1521292182264,10.7159673940896,11.900056749187,12.2746513726821,6.13266549863533,15.1882505530901,10.6257011479636,0,0,6.10531672999548,6.95760732373446,4.55869841992487,11.6520079115633,14.3418310374407,10.2853830837524,6.16745360156538,4.2699598291882,17.5133959376184,18.0502400531864,7.67850830797222,14.8750331833247,18.7683210279715,13.82822218752,20.3859645695403,11.2377627658915,3.99330275081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75040700680967,5.7330202546446,12.9372544959748,1.42212250559454,7.67193407429627,1.39086617842064,7.21540228257228,8.70307889484755,5.8044282211943,4.14755797088455,5.16272830584333,13.608180084015,12.7820107138737,13.5483856061097,7.7896335304977,13.9592873548944,11.4664672677292,4.3623618401139,0.687051635306701,3.90137359943262,2.58971534875158,4.20917508110613,8.11870101936739,7.28566489588709,0,7.75908023129336,13.0812099855325,0.11294608203896,0.549702583727146,7.85006786546702,7.33154502025474,10.9279780251979,3.76253837089218,13.4831576964648,0,8.83388102017254,13.3670880147189,17.3288848309194,12.4046793722106,15.5073464666758,16.8235087611036,11.293350619517,2.32120120187355,4.2347384605883,0.882655033580851,9.49437304720472,10.5507735183044,20.640899973809,6.94194873650012,15.0261193321921,2.61810414204226,9.52248312927721,13.0198256358363,15.7139713734682,12.5461703015899,5.92982196724871,4.47988845051152,6.8417190546176,7.95512871987458,12.0247832369502,6.43264296743914,3.76061308938563,6.51696804676859,5.62724673327975,6.63335551567024,19.2385372303125,9.16906122174218,18.330961222708,17.5681834753937,24.891960432639,3.3639558774184,9.6107209000029,15.9672579276993,3.48346796635138,8.55583252713203,14.5480434511509,7.67427597701637,11.9757728356565,4.31437323638165,0.426909383510862,11.5843369372164,4.131959296903,14.0784565442073,14.9134561903097,6.51033885305182,16.6439193546378,19.7248317719206,10.2581917537035|short_description=p2@CDC25B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1726 | |||
|TSSclassifier=S | |||
|UniProt=P30305,B3KS38,Q6MZW8 | |||
|association_with_transcript=0bp_to_ENST00000245960,ENST00000467519,NM_004358,NM_021872,NM_021873,uc002wjl.2,uc002wjm.2,uc002wjn.2,uc002wjo.2,uc002wjp.2_5end | |||
|description=CAGE_peak_2_at_CDC25B_5end | |||
|id=chr20:3776371..3776506,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.87e-17!52;CL:0000542!1.04e-16!53;CL:0000051!1.04e-16!53;CL:0000084!9.88e-13!25;CL:0000827!9.88e-13!25;CL:0000791!9.43e-12!18;CL:0000789!9.43e-12!18;CL:0002420!9.43e-12!18;CL:0002419!9.43e-12!18;CL:0000790!9.43e-12!18;CL:0000625!3.65e-08!11;CL:0002087!1.90e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.47e-13;25!CL:0000791;9.65e-12;18!CL:0000789;9.65e-12;18!CL:0002419;9.65e-12;18!CL:0000542;2.10e-10;53!CL:0000625;3.69e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.75e-17,52;CL:0000542,1.00e-16,53;CL:0000051,1.00e-16,53;CL:0000084,9.86e-13,25;CL:0000827,9.86e-13,25;CL:0000791,9.41e-12,18;CL:0000789,9.41e-12,18;CL:0002420,9.41e-12,18;CL:0002419,9.41e-12,18;CL:0000790,9.41e-12,18;CL:0002087,8.04e-09,115;CL:0000625,3.64e-08,11;CL:0002031,1.50e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;9.65e-12;18!CL:0000051;2.10e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.95e-09!15;UBERON:0000179!4.95e-09!15;UBERON:0000463!4.95e-09!15;UBERON:0007023!7.01e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.97e-09;15!UBERON:0000179;4.97e-09;15!UBERON:0000463;4.97e-09;15!UBERON:0002390;1.53e-08;32!UBERON:0002193;1.79e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.94e-09,15;UBERON:0000179,4.94e-09,15;UBERON:0000463,4.94e-09,15 | |||
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| |||
|short_description=p2@CDC25B | |||
}} |
Revision as of 08:28, 12 September 2013
Short description: | p2@CDC25B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CDC25B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000245960, ENST00000467519, NM_004358, NM_021872, NM_021873, uc002wjl.2, uc002wjm.2, uc002wjn.2, uc002wjo.2, uc002wjp.2_5end |
EntrezGene: | CDC25B |
HGNC: | 1726 |
UniProt: | P30305B3KS38Q6MZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.75e-17 | 52 |
lymphocyte | 1.00e-16 | 53 |
common lymphoid progenitor | 1.00e-16 | 53 |
T cell | 9.86e-13 | 25 |
pro-T cell | 9.86e-13 | 25 |
mature alpha-beta T cell | 9.41e-12 | 18 |
alpha-beta T cell | 9.41e-12 | 18 |
immature T cell | 9.41e-12 | 18 |
mature T cell | 9.41e-12 | 18 |
immature alpha-beta T cell | 9.41e-12 | 18 |
nongranular leukocyte | 8.04e-09 | 115 |
CD8-positive, alpha-beta T cell | 3.64e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.50e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 4.94e-09 | 15 |
haemolymphatic fluid | 4.94e-09 | 15 |
organism substance | 4.94e-09 | 15 |
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