FFCP PHASE1:Mm9::chr10:67011849..67011897,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=211488|HGNC=|UniProt=Q6PDY2|association_with_transcript=-146bp_to_ENSMUST00000075686,NM_001005419,uc007flz.2_5end|description=CAGE_peak_2_at_Ado_5end|id=chr10:67011849..67011897,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.32e-17!193;UBERON:0004120!4.32e-17!193;UBERON:0006603!4.32e-17!193;UBERON:0001048!9.44e-13!147;UBERON:0003081!1.92e-09!88;UBERON:0003104!9.34e-08!131;UBERON:0009142!9.34e-08!131|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.46e-12,134;UBERON:0000926,2.83e-11,120;UBERON:0004120,2.83e-11,120;UBERON:0006603,2.83e-11,120;UBERON:0003081,5.84e-10,87|phase1_expression=12.4916100741739,2.09385244583617,3.63999391511629,2.11724947914781,1.50268718983904,7.55456723603504,9.34450562382103,20.4014851037691,8.16574588479667,12.4054198950657,15.580835108521,23.6923312216149,16.4352700733957,19.2324885321794,7.66152452176024,7.08663435864391,10.4934281719222,17.192688012024,16.4537320326887,14.429248161133,5.95303031057488,14.2978969729275,10.7091913546964,5.91971964335605,5.96464130774642,3.44539178469012,2.15380998079537,4.74036711908956,6.84084310042946,5.04060259519861,4.43461021310609,33.0215950199008,38.7490816178279,15.8481681015439,9.82095507154334,10.9714865936605,14.2918549383658,3.76678467663217,2.3440060335714,2.09409497589519,4.1176204162171,4.78131839470912,2.91306211818692,16.7442767907518,12.8748702648783,15.7850206859046,12.5182615095686,12.4274339136855,5.27246838562732,6.61061656852564,10.2190087786515,12.9377307928474,12.9192606664457,15.2326049822382,15.7964085596958,14.1492689819771,15.4728057566929,8.25075347643908,4.45096213891115,4.7609188134483,6.33831403506179,16.6033820713875,13.3394219416671,13.9484456178617,25.7105254267413,14.9200824138681,12.583204641773,11.5265491596466,8.39885859698669,6.21027316325777,7.99234853135252,6.85562362569129,9.93908434282261,7.34944795289724,6.90087391331302,8.27296907949019,8.8092704799511,5.10749352340751,5.68344173048101,5.53922408466814,5.03182039813253,3.12548022334056,5.30447698102624,3.37657566019008,4.5839474333043,8.83885756421003,5.26775218956681,6.33758115806022,22.3392270332893,12.7715936580468,9.85539261585705,16.3480536626463,6.11974200336975,10.2543606411185,11.695975514058,3.58421509677868,10.3928870897496,25.0532574189745,28.8362465109184,24.0270910667031,16.3378366940949,10.2661181931454,2.54805239706646,7.11066703153331,10.1750789275271,10.1343946190039,8.59391556525132,6.16592950482924,4.14300613835475,8.75808620482466,12.1439728736295,11.2652226975492,14.0675453326196,10.7013074792362,10.347806227942,14.0746582289237,11.8653584512499,9.83275627055399,11.4999371753484,14.5590164952668,10.6003928860989,10.6672555689749,7.45567044872489,3.51336956413857,2.72280718857492,7.15279754584056,11.0229914545447,6.59893004092748,9.02198612218759,4.6435098215495,3.66000482254901,5.02617408451458,2.60736480288415,1.53429274398198,6.2336413367868,2.92034273521964,14.8685471221462,10.4501855312478,20.217820674694,8.20723237957248,15.6144531555244,19.3117767724117,13.3245976055958,11.6042709733501,12.5867523429957,11.1458936647819,13.118241438362,7.76110112217047,15.5208954911646,13.9938499324186,11.2608719464927,13.8093311429372,6.95118123063995,12.8853301613202,11.5237996388448,17.9130840136644,4.21327912387941,7.46308930632674,14.7765019685708,18.8484453007307,17.3549284386011,16.2055855314913,14.2046841351126,17.7087808572663,14.6553757243009,16.9749779667798,19.3156849007726,13.1944836874902,21.5573403386659,11.984224877774,17.5919316714507,17.5439984910399,13.173006917463,14.091673969839,3.36463917702604,5.9684675179985,1.32167513193519,8.99131926656051,13.2238715331845,12.5407802804637,11.7269389803105,11.4959609035305,14.8993289376063,11.9842144450912,10.9141684155238,6.91735609840846,7.54005626400809,8.55512829776949,8.57841983324129,9.88701349519644,5.83572734661674,5.77509692437665,18.3977863924489,16.5660343284107,14.6520056375005,17.3103628668517,14.9343415119072,18.3755848112635,15.5561881325673,13.2849133181642,10.3619160375307,11.7227305725711,6.22550516883013,13.1807633515714,12.1866576970186,13.0420025183215,10.7515864335907,11.3353265083636,9.42115651591253,9.78166867332756,13.2950885955529,12.0807021802756,17.2521847832825,10.4199465347181,11.5453939052387,12.6289438973556,13.2754086006215,11.0962009913574,14.5955020231618,16.6752442358027,15.1557428091084,13.5796068620151,12.9079636558676,15.5780819420889,13.0924002487308,14.8301572371927,12.6108115284953,13.5093460685753,18.975117470241,10.8149787712387,12.2606337124786,13.7416605652436,4.52373851817817,10.3342079925555,8.35999264132362,12.417153583713,5.29816946959713,4.21962071731931,16.8852993737976,11.3611917241968,11.3582958989852,12.1036010731958,8.61693590931196,16.010909462821,15.1503098376028,20.6645867475848,12.5491317519217,11.1057226006299,9.09161889277004,4.81981974632711,14.4778886912434,12.998789067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| ||
|EntrezGene=211488 | |||
|HGNC= | |||
|UniProt=Q6PDY2 | |||
|association_with_transcript=-146bp_to_ENSMUST00000075686,NM_001005419,uc007flz.2_5end | |||
|description=CAGE_peak_2_at_Ado_5end | |||
|id=chr10:67011849..67011897,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.32e-17!193;UBERON:0004120!4.32e-17!193;UBERON:0006603!4.32e-17!193;UBERON:0001048!9.44e-13!147;UBERON:0003081!1.92e-09!88;UBERON:0003104!9.34e-08!131;UBERON:0009142!9.34e-08!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.46e-12,134;UBERON:0000926,2.83e-11,120;UBERON:0004120,2.83e-11,120;UBERON:0006603,2.83e-11,120;UBERON:0003081,5.84e-10,87 | |||
|phase1_expression=12.4916100741739,2.09385244583617,3.63999391511629,2.11724947914781,1.50268718983904,7.55456723603504,9.34450562382103,20.4014851037691,8.16574588479667,12.4054198950657,15.580835108521,23.6923312216149,16.4352700733957,19.2324885321794,7.66152452176024,7.08663435864391,10.4934281719222,17.192688012024,16.4537320326887,14.429248161133,5.95303031057488,14.2978969729275,10.7091913546964,5.91971964335605,5.96464130774642,3.44539178469012,2.15380998079537,4.74036711908956,6.84084310042946,5.04060259519861,4.43461021310609,33.0215950199008,38.7490816178279,15.8481681015439,9.82095507154334,10.9714865936605,14.2918549383658,3.76678467663217,2.3440060335714,2.09409497589519,4.1176204162171,4.78131839470912,2.91306211818692,16.7442767907518,12.8748702648783,15.7850206859046,12.5182615095686,12.4274339136855,5.27246838562732,6.61061656852564,10.2190087786515,12.9377307928474,12.9192606664457,15.2326049822382,15.7964085596958,14.1492689819771,15.4728057566929,8.25075347643908,4.45096213891115,4.7609188134483,6.33831403506179,16.6033820713875,13.3394219416671,13.9484456178617,25.7105254267413,14.9200824138681,12.583204641773,11.5265491596466,8.39885859698669,6.21027316325777,7.99234853135252,6.85562362569129,9.93908434282261,7.34944795289724,6.90087391331302,8.27296907949019,8.8092704799511,5.10749352340751,5.68344173048101,5.53922408466814,5.03182039813253,3.12548022334056,5.30447698102624,3.37657566019008,4.5839474333043,8.83885756421003,5.26775218956681,6.33758115806022,22.3392270332893,12.7715936580468,9.85539261585705,16.3480536626463,6.11974200336975,10.2543606411185,11.695975514058,3.58421509677868,10.3928870897496,25.0532574189745,28.8362465109184,24.0270910667031,16.3378366940949,10.2661181931454,2.54805239706646,7.11066703153331,10.1750789275271,10.1343946190039,8.59391556525132,6.16592950482924,4.14300613835475,8.75808620482466,12.1439728736295,11.2652226975492,14.0675453326196,10.7013074792362,10.347806227942,14.0746582289237,11.8653584512499,9.83275627055399,11.4999371753484,14.5590164952668,10.6003928860989,10.6672555689749,7.45567044872489,3.51336956413857,2.72280718857492,7.15279754584056,11.0229914545447,6.59893004092748,9.02198612218759,4.6435098215495,3.66000482254901,5.02617408451458,2.60736480288415,1.53429274398198,6.2336413367868,2.92034273521964,14.8685471221462,10.4501855312478,20.217820674694,8.20723237957248,15.6144531555244,19.3117767724117,13.3245976055958,11.6042709733501,12.5867523429957,11.1458936647819,13.118241438362,7.76110112217047,15.5208954911646,13.9938499324186,11.2608719464927,13.8093311429372,6.95118123063995,12.8853301613202,11.5237996388448,17.9130840136644,4.21327912387941,7.46308930632674,14.7765019685708,18.8484453007307,17.3549284386011,16.2055855314913,14.2046841351126,17.7087808572663,14.6553757243009,16.9749779667798,19.3156849007726,13.1944836874902,21.5573403386659,11.984224877774,17.5919316714507,17.5439984910399,13.173006917463,14.091673969839,3.36463917702604,5.9684675179985,1.32167513193519,8.99131926656051,13.2238715331845,12.5407802804637,11.7269389803105,11.4959609035305,14.8993289376063,11.9842144450912,10.9141684155238,6.91735609840846,7.54005626400809,8.55512829776949,8.57841983324129,9.88701349519644,5.83572734661674,5.77509692437665,18.3977863924489,16.5660343284107,14.6520056375005,17.3103628668517,14.9343415119072,18.3755848112635,15.5561881325673,13.2849133181642,10.3619160375307,11.7227305725711,6.22550516883013,13.1807633515714,12.1866576970186,13.0420025183215,10.7515864335907,11.3353265083636,9.42115651591253,9.78166867332756,13.2950885955529,12.0807021802756,17.2521847832825,10.4199465347181,11.5453939052387,12.6289438973556,13.2754086006215,11.0962009913574,14.5955020231618,16.6752442358027,15.1557428091084,13.5796068620151,12.9079636558676,15.5780819420889,13.0924002487308,14.8301572371927,12.6108115284953,13.5093460685753,18.975117470241,10.8149787712387,12.2606337124786,13.7416605652436,4.52373851817817,10.3342079925555,8.35999264132362,12.417153583713,5.29816946959713,4.21962071731931,16.8852993737976,11.3611917241968,11.3582958989852,12.1036010731958,8.61693590931196,16.010909462821,15.1503098376028,20.6645867475848,12.5491317519217,11.1057226006299,9.09161889277004,4.81981974632711,14.4778886912434,12.9987890677096,13.3567306669932,13.0326397148303,7.96470830039777,14.0812768969889,17.8370898609203,12.2593301841334,13.5838870725155,13.8345816574767,12.1461297789064,9.81541069589265,11.4079161083111,13.2735438333043,12.6502330289999,1.03135543248187,4.76615448055303,11.3438489239725,8.40831444587904,9.21649250635847,7.44828981297549,8.20496560969525,10.0374902567294,11.5696680663548,11.9682571112492,10.3797714723272,11.0264199027481,8.244312647074,8.88054346827481,12.9672788595535,11.6984897123074,11.9822856813895,7.28702091574627,5.7481843623258,9.3978984438819,17.5428837768739,12.5932278611404,10.360265135258,10.3887613067979,10.066239621087,8.49892149969276,5.59805809294632,10.6413979829406,1.90934123603023,13.28611173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| |||
|short_description=p2@Ado | |||
}} | |||
Revision as of 17:11, 12 September 2013
| Short description: | p2@Ado |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Ado_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -146bp_to_ENSMUST00000075686, NM_001005419, uc007flz.2_5end |
| EntrezGene: | Ado |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primordium | 1.46e-12 | 134 |
| mesoderm | 2.83e-11 | 120 |
| mesoderm-derived structure | 2.83e-11 | 120 |
| presumptive mesoderm | 2.83e-11 | 120 |
| lateral plate mesoderm | 5.84e-10 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
