FFCP PHASE1:Hg19::chr2:233285967..233285976,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C49|description=CAGE_peak_at_chr2:233285967..233285976,-|id=chr2:233285967..233285976,-|ontology_enrichment_celltype=CL:0002322!1.85e-56!5;CL:0000039!6.74e-26!7;CL:0000586!6.74e-26!7;CL:0000148!8.93e-11!10;CL:0000541!8.93e-11!10;CL:0000540!3.37e-08!6;CL:0000031!3.37e-08!6;CL:0000404!3.37e-08!6;CL:0000147!7.67e-08!14|ontology_enrichment_celltype_v019=CL:0002322;1.69e-109;5!CL:0000039;3.89e-50;7!CL:0000586;3.89e-50;7!CL:0002321;7.44e-37;15!CL:0000148;1.98e-20;10!CL:0000147;8.26e-15;14!CL:0000710;1.43e-10;20!CL:0000075;5.44e-08;27|ontology_enrichment_celltype_v019_2=CL:0002322,1.21e-109,5;CL:0000039,4.71e-50,7;CL:0000586,4.71e-50,7;CL:0000148,1.79e-20,10;CL:0000541,1.79e-20,10;CL:0000147,7.69e-15,14;CL:0000710,1.36e-10,20;CL:0000075,5.24e-08,27|ontology_enrichment_development_v019=UBERON:0009117;2.66e-35;10!UBERON:0005564;2.66e-35;10|ontology_enrichment_disease=DOID:3095!1.15e-12!22;DOID:2994!1.15e-12!22;DOID:4929!8.52e-07!2|ontology_enrichment_disease_v019=DOID:3095;2.39e-16;22!DOID:2994;2.39e-16;22|ontology_enrichment_disease_v019_2=DOID:3095,2.53e-16,22;DOID:2994,2.53e-16,22|ontology_enrichment_uberon=UBERON:0000473!1.05e-22!8;UBERON:0003135!1.34e-16!11;UBERON:0004913!2.46e-12!1;UBERON:0003703!2.46e-12!1;UBERON:0001174!2.46e-12!1;UBERON:0004914!2.46e-12!1;UBERON:0000991!8.40e-09!21;UBERON:0009196!8.40e-09!21;UBERON:0009117!8.40e-09!21;UBERON:0005564!8.40e-09!21;UBERON:0004176!2.07e-08!22;UBERON:0003101!2.07e-08!22;UBERON:0000079!2.07e-08!22|ontology_enrichment_uberon_v019=UBERON:0000473;5.86e-44;8!UBERON:0003135;3.77e-32;11!UBERON:0000922;2.97e-22;49!UBERON:0000991;4.19e-17;21!UBERON:0003101;2.39e-16;22!UBERON:0000079;2.39e-16;22!UBERON:0002323;8.32e-08;45|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.93e-44,8;UBERON:0003135,4.25e-32,11;UBERON:0000991,4.46e-17,21;UBERON:0009196,4.46e-17,21;UBERON:0009117,4.46e-17,21;UBERON:0005564,4.46e-17,21;UBERON:0004176,2.53e-16,22;UBERON:0003101,2.53e-16,22;UBERON:0000079,2.53e-16,22;UBERON:0002323,5.18e-08,46;UBERON:0003133,1.08e-07,48;UBERON:0004458,1.53e-07,49;UBERON:0003886,7.16e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95250124938694,3.71083351300159,2.90484857173796,2.90250954043037,2.77552935963191,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,1.73381010561369,4.27547848424897,2.48116228744081,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:233285967..233285976,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr2:233285967..233285976,- | |||
|id=chr2:233285967..233285976,- | |||
|ontology_enrichment_celltype=CL:0002322!1.85e-56!5;CL:0000039!6.74e-26!7;CL:0000586!6.74e-26!7;CL:0000148!8.93e-11!10;CL:0000541!8.93e-11!10;CL:0000540!3.37e-08!6;CL:0000031!3.37e-08!6;CL:0000404!3.37e-08!6;CL:0000147!7.67e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.69e-109;5!CL:0000039;3.89e-50;7!CL:0000586;3.89e-50;7!CL:0002321;7.44e-37;15!CL:0000148;1.98e-20;10!CL:0000147;8.26e-15;14!CL:0000710;1.43e-10;20!CL:0000075;5.44e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.21e-109,5;CL:0000039,4.71e-50,7;CL:0000586,4.71e-50,7;CL:0000148,1.79e-20,10;CL:0000541,1.79e-20,10;CL:0000147,7.69e-15,14;CL:0000710,1.36e-10,20;CL:0000075,5.24e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.66e-35;10!UBERON:0005564;2.66e-35;10 | |||
|ontology_enrichment_disease=DOID:3095!1.15e-12!22;DOID:2994!1.15e-12!22;DOID:4929!8.52e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.39e-16;22!DOID:2994;2.39e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.53e-16,22;DOID:2994,2.53e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.05e-22!8;UBERON:0003135!1.34e-16!11;UBERON:0004913!2.46e-12!1;UBERON:0003703!2.46e-12!1;UBERON:0001174!2.46e-12!1;UBERON:0004914!2.46e-12!1;UBERON:0000991!8.40e-09!21;UBERON:0009196!8.40e-09!21;UBERON:0009117!8.40e-09!21;UBERON:0005564!8.40e-09!21;UBERON:0004176!2.07e-08!22;UBERON:0003101!2.07e-08!22;UBERON:0000079!2.07e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.86e-44;8!UBERON:0003135;3.77e-32;11!UBERON:0000922;2.97e-22;49!UBERON:0000991;4.19e-17;21!UBERON:0003101;2.39e-16;22!UBERON:0000079;2.39e-16;22!UBERON:0002323;8.32e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.93e-44,8;UBERON:0003135,4.25e-32,11;UBERON:0000991,4.46e-17,21;UBERON:0009196,4.46e-17,21;UBERON:0009117,4.46e-17,21;UBERON:0005564,4.46e-17,21;UBERON:0004176,2.53e-16,22;UBERON:0003101,2.53e-16,22;UBERON:0000079,2.53e-16,22;UBERON:0002323,5.18e-08,46;UBERON:0003133,1.08e-07,48;UBERON:0004458,1.53e-07,49;UBERON:0003886,7.16e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95250124938694,3.71083351300159,2.90484857173796,2.90250954043037,2.77552935963191,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,1.73381010561369,4.27547848424897,2.48116228744081,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:233285967..233285976,- | |||
}} |
Revision as of 17:25, 12 September 2013
Short description: | p@chr2:233285967..233285976, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:233285967..233285976, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.21e-109 | 5 |
germ line cell | 4.71e-50 | 7 |
germ cell | 4.71e-50 | 7 |
melanocyte | 1.79e-20 | 10 |
melanoblast | 1.79e-20 | 10 |
pigment cell | 7.69e-15 | 14 |
neurecto-epithelial cell | 1.36e-10 | 20 |
columnar/cuboidal epithelial cell | 5.24e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 6.93e-44 | 8 |
male reproductive organ | 4.25e-32 | 11 |
gonad | 4.46e-17 | 21 |
indifferent external genitalia | 4.46e-17 | 21 |
indifferent gonad | 4.46e-17 | 21 |
gonad primordium | 4.46e-17 | 21 |
external genitalia | 2.53e-16 | 22 |
male organism | 2.53e-16 | 22 |
male reproductive system | 2.53e-16 | 22 |
body cavity | 5.18e-08 | 46 |
reproductive organ | 1.08e-07 | 48 |
body cavity or lining | 1.53e-07 | 49 |
body cavity precursor | 7.16e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.53e-16 | 22 |
germ cell cancer | 2.53e-16 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.