FFCP PHASE1:Hg19::chr2:233742013..233742020,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C611|description=CAGE_peak_at_chr2:233742013..233742020,-|id=chr2:233742013..233742020,-|ontology_enrichment_celltype=CL:0000181!4.59e-07!12;CL:0000417!4.59e-07!12;CL:0000668!4.59e-07!12;CL:0000414!4.59e-07!12;CL:0000412!4.59e-07!12;CL:0000182!4.59e-07!12|ontology_enrichment_celltype_v019=CL:0000182;1.96e-25;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12|ontology_enrichment_development_v019=UBERON:0004161;1.17e-27;11!UBERON:0009497;1.50e-23;13!UBERON:0001041;1.13e-10;30!UBERON:0006595;3.01e-10;86!UBERON:0003104;3.83e-10;31|ontology_enrichment_disease=DOID:3493!2.04e-17!2;DOID:5409!5.87e-09!4|ontology_enrichment_disease_v019=DOID:7;9.20e-09;39|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39|ontology_enrichment_uberon=UBERON:0001155!1.77e-15!9;UBERON:0000160!3.69e-14!27;UBERON:0005409!5.20e-14!35;UBERON:0000059!1.06e-12!11;UBERON:0001154!6.88e-10!1;UBERON:0001153!6.88e-10!1;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0001007!4.16e-08!155;UBERON:0001555!4.16e-08!155;UBERON:0007026!4.16e-08!155;UBERON:0004119!3.09e-07!169;UBERON:0000925!3.09e-07!169;UBERON:0006595!3.09e-07!169|ontology_enrichment_uberon_v019=UBERON:0000160;3.12e-17;17!UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0001155;1.41e-15;9!UBERON:0005409;1.15e-13;22!UBERON:0000059;6.11e-13;11!UBERON:0002423;1.18e-12;25!UBERON:0002365;1.30e-09;31!UBERON:0002330;1.30e-09;31!UBERON:0002368;4.44e-09;33!UBERON:0004921;4.55e-09;33!UBERON:0002108;5.35e-08;4!UBERON:0000949;3.61e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-17,17;UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0001155,1.52e-15,9;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0000059,6.49e-13,11;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0005409,3.64e-12,25;UBERON:0004921,2.09e-10,118;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0002108,5.35e-08,4;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0000949,2.33e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.12298154808014,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23011047459617,2.14281231791033,2.89835238572995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,5.55653938377201,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0|short_description=p@chr2:233742013..233742020,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_at_chr2:233742013..233742020,- | |||
|id=chr2:233742013..233742020,- | |||
|ontology_enrichment_celltype=CL:0000181!4.59e-07!12;CL:0000417!4.59e-07!12;CL:0000668!4.59e-07!12;CL:0000414!4.59e-07!12;CL:0000412!4.59e-07!12;CL:0000182!4.59e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.96e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.17e-27;11!UBERON:0009497;1.50e-23;13!UBERON:0001041;1.13e-10;30!UBERON:0006595;3.01e-10;86!UBERON:0003104;3.83e-10;31 | |||
|ontology_enrichment_disease=DOID:3493!2.04e-17!2;DOID:5409!5.87e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:7;9.20e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001155!1.77e-15!9;UBERON:0000160!3.69e-14!27;UBERON:0005409!5.20e-14!35;UBERON:0000059!1.06e-12!11;UBERON:0001154!6.88e-10!1;UBERON:0001153!6.88e-10!1;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0001007!4.16e-08!155;UBERON:0001555!4.16e-08!155;UBERON:0007026!4.16e-08!155;UBERON:0004119!3.09e-07!169;UBERON:0000925!3.09e-07!169;UBERON:0006595!3.09e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.12e-17;17!UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0001155;1.41e-15;9!UBERON:0005409;1.15e-13;22!UBERON:0000059;6.11e-13;11!UBERON:0002423;1.18e-12;25!UBERON:0002365;1.30e-09;31!UBERON:0002330;1.30e-09;31!UBERON:0002368;4.44e-09;33!UBERON:0004921;4.55e-09;33!UBERON:0002108;5.35e-08;4!UBERON:0000949;3.61e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-17,17;UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0001155,1.52e-15,9;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0000059,6.49e-13,11;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0005409,3.64e-12,25;UBERON:0004921,2.09e-10,118;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0002108,5.35e-08,4;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0000949,2.33e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.12298154808014,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23011047459617,2.14281231791033,2.89835238572995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,5.55653938377201,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr2:233742013..233742020,- | |||
}} |
Revision as of 17:27, 12 September 2013
Short description: | p@chr2:233742013..233742020, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:233742013..233742020, - |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.30e-17 | 17 |
liver | 2.05e-16 | 19 |
digestive gland | 2.05e-16 | 19 |
liver bud | 2.05e-16 | 19 |
colon | 1.52e-15 | 9 |
hepatic diverticulum | 2.73e-14 | 22 |
liver primordium | 2.73e-14 | 22 |
digestive tract diverticulum | 1.05e-13 | 23 |
large intestine | 6.49e-13 | 11 |
epithelial sac | 1.13e-12 | 25 |
epithelium of foregut-midgut junction | 1.13e-12 | 25 |
anatomical boundary | 1.13e-12 | 25 |
hepatobiliary system | 1.13e-12 | 25 |
foregut-midgut junction | 1.13e-12 | 25 |
septum transversum | 1.13e-12 | 25 |
sac | 3.25e-12 | 26 |
gastrointestinal system | 3.64e-12 | 25 |
subdivision of digestive tract | 2.09e-10 | 118 |
exocrine gland | 2.29e-10 | 31 |
exocrine system | 2.29e-10 | 31 |
endocrine gland | 2.89e-09 | 35 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
small intestine | 5.35e-08 | 4 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |
endocrine system | 2.33e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.18e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.